RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 SF3B2Q13435 895 aaKnown RBP15.62■□□□□ 0.09
CKS1B-206ENST00000474215 FAM182BQ5T319 152 aa15.62■□□□□ 0.09
CKS1B-206ENST00000474215 THSD7AQ9UPZ6 1657 aa15.62■□□□□ 0.09
CKS1B-206ENST00000474215 TOM1L2Q6ZVM7 507 aa15.61■□□□□ 0.09
CKS1B-206ENST00000474215 NFAT5O94916 1531 aa15.61■□□□□ 0.09
CKS1B-206ENST00000474215 WDR17Q8IZU2 1322 aa15.61■□□□□ 0.09
CKS1B-206ENST00000474215 ANKRD36BQ8N2N9 1353 aa15.61■□□□□ 0.09
CKS1B-206ENST00000474215 PDE3BQ13370 1112 aa15.6■□□□□ 0.09
CKS1B-206ENST00000474215 COL18A1P39060 1754 aa15.59■□□□□ 0.09
CKS1B-206ENST00000474215 CSB-PGBD3P0DP91 1061 aa15.58■□□□□ 0.08
CKS1B-206ENST00000474215 EIF4G2P78344 907 aaKnown RBP eCLIP15.58■□□□□ 0.08
CKS1B-206ENST00000474215 FAM196AQ6ZSG2 479 aa15.58■□□□□ 0.08
CKS1B-206ENST00000474215 DEFB132Q7Z7B7 95 aa15.58■□□□□ 0.08
CKS1B-206ENST00000474215 COG3Q96JB2 828 aa15.58■□□□□ 0.08
CKS1B-206ENST00000474215 CARD10Q9BWT7 1032 aa15.57■□□□□ 0.08
CKS1B-206ENST00000474215 OVOS2A0A0J9YW53 1432 aa15.57■□□□□ 0.08
CKS1B-206ENST00000474215 OVOS2Q6IE36 1432 aa15.57■□□□□ 0.08
CKS1B-206ENST00000474215 USP54Q70EL1 1684 aa15.57■□□□□ 0.08
CKS1B-206ENST00000474215 FYB1O15117 783 aa15.56■□□□□ 0.08
CKS1B-206ENST00000474215 HSPA5P11021 654 aaKnown RBP15.55■□□□□ 0.08
CKS1B-206ENST00000474215 BAG6P46379 1132 aa15.55■□□□□ 0.08
CKS1B-206ENST00000474215 CDCA7Q9BWT1 371 aaPredicted RBP15.55■□□□□ 0.08
CKS1B-206ENST00000474215 ABCC6O95255 1503 aa15.54■□□□□ 0.08
CKS1B-206ENST00000474215 DDB1Q16531 1140 aa15.54■□□□□ 0.08
CKS1B-206ENST00000474215 CARD14Q9BXL6 1004 aa15.54■□□□□ 0.08
CKS1B-206ENST00000474215 ERBB3P21860 1342 aa15.53■□□□□ 0.08
CKS1B-206ENST00000474215 TRIM37O94972 964 aa15.53■□□□□ 0.08
CKS1B-206ENST00000474215 IP6K1Q92551 441 aa15.53■□□□□ 0.08
CKS1B-206ENST00000474215 GGNBP2Q9H3C7 697 aa15.53■□□□□ 0.08
CKS1B-206ENST00000474215 NLRP2Q9NX02 1062 aa15.53■□□□□ 0.08
CKS1B-206ENST00000474215 C11orf95C9JLR9 678 aaPredicted RBP15.52■□□□□ 0.08
CKS1B-206ENST00000474215 ANKRD24Q8TF21 1146 aa15.52■□□□□ 0.08
CKS1B-206ENST00000474215 RGPD5Q99666 1765 aa15.52■□□□□ 0.07
CKS1B-206ENST00000474215 CCDC7Q96M83 1385 aa15.51■□□□□ 0.07
CKS1B-206ENST00000474215 FBLN1P23142 703 aa15.51■□□□□ 0.07
CKS1B-206ENST00000474215 POLR3GLQ9BT43 218 aa15.51■□□□□ 0.07
CKS1B-206ENST00000474215 MAP3K19Q56UN5 1328 aa15.5■□□□□ 0.07
CKS1B-206ENST00000474215 AMPHP49418 695 aa15.5■□□□□ 0.07
CKS1B-206ENST00000474215 EN1Q05925 392 aaPredicted RBP15.5■□□□□ 0.07
CKS1B-206ENST00000474215 PARP4Q9UKK3 1724 aaKnown RBP15.5■□□□□ 0.07
CKS1B-206ENST00000474215 EXOC5O00471 708 aa15.49■□□□□ 0.07
CKS1B-206ENST00000474215 APBA3O96018 575 aa15.49■□□□□ 0.07
CKS1B-206ENST00000474215 HOXC9P31274 260 aa15.49■□□□□ 0.07
CKS1B-206ENST00000474215 MARCH10Q8NA82 808 aaPredicted RBP15.48■□□□□ 0.07
CKS1B-206ENST00000474215 LTV1Q96GA3 475 aaPredicted RBP15.48■□□□□ 0.07
CKS1B-206ENST00000474215 LTN1O94822 1766 aa15.48■□□□□ 0.07
CKS1B-206ENST00000474215 DISP2A7MBM2 1401 aa15.48■□□□□ 0.07
CKS1B-206ENST00000474215 RGPD1P0DJD0 1748 aa15.47■□□□□ 0.07
CKS1B-206ENST00000474215 RRS1Q15050 365 aaKnown RBP15.47■□□□□ 0.07
CKS1B-206ENST00000474215 NSD3Q9BZ95 1437 aa15.47■□□□□ 0.07
CKS1B-206ENST00000474215 OVOS2A0A0G2JMS6 1433 aa15.46■□□□□ 0.07
CKS1B-206ENST00000474215 IL2RBP14784 551 aa15.46■□□□□ 0.07
CKS1B-206ENST00000474215 CAMKK2Q96RR4 588 aa15.46■□□□□ 0.07
CKS1B-206ENST00000474215 MYOM1P52179 1685 aa15.46■□□□□ 0.07
CKS1B-206ENST00000474215 CGNL1Q0VF96 1302 aa15.45■□□□□ 0.06
CKS1B-206ENST00000474215 EZH2Q15910 746 aaKnown RBP15.45■□□□□ 0.06
CKS1B-206ENST00000474215 LRRC37A3O60309 1634 aa15.45■□□□□ 0.06
CKS1B-206ENST00000474215 RTL1A6NKG5 1358 aa15.44■□□□□ 0.06
CKS1B-206ENST00000474215 TNS1Q9HBL0 1735 aaKnown RBP15.43■□□□□ 0.06
CKS1B-206ENST00000474215 BCL11BQ9C0K0 894 aaPredicted RBP15.43■□□□□ 0.06
CKS1B-206ENST00000474215 PANK3Q9H999 370 aa15.43■□□□□ 0.06
CKS1B-206ENST00000474215 PARD3Q8TEW0 1356 aa15.43■□□□□ 0.06
CKS1B-206ENST00000474215 BCL9O00512 1426 aa15.43■□□□□ 0.06
CKS1B-206ENST00000474215 PEAK1Q9H792 1746 aa15.42■□□□□ 0.06
CKS1B-206ENST00000474215 WNK3Q9BYP7 1800 aa15.41■□□□□ 0.06
CKS1B-206ENST00000474215 KIF24Q5T7B8 1368 aa15.41■□□□□ 0.06
CKS1B-206ENST00000474215 HSP90AB2PQ58FF8 381 aa15.41■□□□□ 0.06
CKS1B-206ENST00000474215 TNS2Q63HR2 1409 aa15.41■□□□□ 0.06
CKS1B-206ENST00000474215 INSRP06213 1382 aa15.4■□□□□ 0.06
CKS1B-206ENST00000474215 NBPF6Q5VWK0 638 aa15.4■□□□□ 0.06
CKS1B-206ENST00000474215 PTF1AQ7RTS3 328 aa15.4■□□□□ 0.06
CKS1B-206ENST00000474215 NBPF4Q96M43 638 aa15.4■□□□□ 0.06
CKS1B-206ENST00000474215 KIF20BQ96Q89 1820 aa15.4■□□□□ 0.06
CKS1B-206ENST00000474215 FLT4P35916 1363 aa15.39■□□□□ 0.05
CKS1B-206ENST00000474215 PSDA5PKW4 1024 aaPredicted RBP15.39■□□□□ 0.05
CKS1B-206ENST00000474215 PLSCR1O15162 318 aa15.39■□□□□ 0.05
CKS1B-206ENST00000474215 EMILIN1Q9Y6C2 1016 aa15.39■□□□□ 0.05
CKS1B-206ENST00000474215 SMG6Q86US8 1419 aaKnown RBP15.38■□□□□ 0.05
CKS1B-206ENST00000474215 PPM1GO15355 546 aaPredicted RBP15.38■□□□□ 0.05
CKS1B-206ENST00000474215 SRCAPQ6ZRS2 3230 aa15.38■□□□□ 0.05
CKS1B-206ENST00000474215 R3HDM1Q15032 1099 aaKnown RBP15.37■□□□□ 0.05
CKS1B-206ENST00000474215 DDX54Q8TDD1 881 aaKnown RBP15.37■□□□□ 0.05
CKS1B-206ENST00000474215 FAM208AQ9UK61 1670 aaKnown RBP15.37■□□□□ 0.05
CKS1B-206ENST00000474215 KIF7Q2M1P5 1343 aa15.37■□□□□ 0.05
CKS1B-206ENST00000474215 KCNQ2O43526 872 aa15.36■□□□□ 0.05
CKS1B-206ENST00000474215 TNNT2P45379 298 aaPredicted RBP15.36■□□□□ 0.05
CKS1B-206ENST00000474215 NBPF14Q5TI25 921 aa15.36■□□□□ 0.05
CKS1B-206ENST00000474215 USHBP1Q8N6Y0 703 aa15.36■□□□□ 0.05
CKS1B-206ENST00000474215 ZCRB1Q8TBF4 217 aaKnown RBP15.36■□□□□ 0.05
CKS1B-206ENST00000474215 POLKQ9UBT6 870 aa15.36■□□□□ 0.05
CKS1B-206ENST00000474215 WASHC2AQ641Q2 1341 aa15.36■□□□□ 0.05
CKS1B-206ENST00000474215 RAPGEF4Q8WZA2 1011 aa15.35■□□□□ 0.05
CKS1B-206ENST00000474215 ACSBG1Q96GR2 724 aa15.35■□□□□ 0.05
CKS1B-206ENST00000474215 KNSTRNQ9Y448 316 aa15.35■□□□□ 0.05
CKS1B-206ENST00000474215 SBF2Q86WG5 1849 aa15.34■□□□□ 0.05
CKS1B-206ENST00000474215 PROM2Q8N271 834 aa15.33■□□□□ 0.04
CKS1B-206ENST00000474215 NSD2O96028 1365 aa15.33■□□□□ 0.04
CKS1B-206ENST00000474215 TATP17735 454 aaPredicted RBP15.32■□□□□ 0.04
CKS1B-206ENST00000474215 MORC1Q86VD1 984 aa15.32■□□□□ 0.04
CKS1B-206ENST00000474215 MEGF6O75095 1541 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms