RNA–Protein interactions for RNA: ENST00000474153.1

UBE3C-206, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-206ENST00000474153 CABP2Q9NPB3 220 aa8.48□□□□□ -1.05
UBE3C-206ENST00000474153 STRN4Q9NRL3 753 aa8.48□□□□□ -1.05
UBE3C-206ENST00000474153 PPP1R1BQ9UD71 204 aaPredicted RBP8.48□□□□□ -1.05
UBE3C-206ENST00000474153 SHANK3Q9BYB0 1731 aa8.48□□□□□ -1.05
UBE3C-206ENST00000474153 KIAA0232Q92628 1395 aa8.48□□□□□ -1.05
UBE3C-206ENST00000474153 OVOS2A0A0J9YW53 1432 aa8.47□□□□□ -1.05
UBE3C-206ENST00000474153 OVOS2Q6IE36 1432 aa8.47□□□□□ -1.05
UBE3C-206ENST00000474153 EDC4Q6P2E9 1401 aaKnown RBP8.47□□□□□ -1.05
UBE3C-206ENST00000474153 NUP188Q5SRE5 1749 aa8.47□□□□□ -1.05
UBE3C-206ENST00000474153 PEAK1Q9H792 1746 aa8.47□□□□□ -1.05
UBE3C-206ENST00000474153 KCNQ2O43526 872 aa8.47□□□□□ -1.05
UBE3C-206ENST00000474153 SRPK2P78362 688 aaKnown RBP8.47□□□□□ -1.05
UBE3C-206ENST00000474153 THRAP3Q9Y2W1 955 aaKnown RBP8.47□□□□□ -1.05
UBE3C-206ENST00000474153 VIRMAQ69YN4 1812 aaKnown RBP8.47□□□□□ -1.05
UBE3C-206ENST00000474153 A0A1W2PP64 1363 aa8.47□□□□□ -1.05
UBE3C-206ENST00000474153 LRRC37A3O60309 1634 aa8.47□□□□□ -1.05
UBE3C-206ENST00000474153 USP31Q70CQ4 1352 aa8.47□□□□□ -1.05
UBE3C-206ENST00000474153 RGPD3A6NKT7 1758 aaPredicted RBP8.46□□□□□ -1.05
UBE3C-206ENST00000474153 RGPD4Q7Z3J3 1758 aa8.46□□□□□ -1.05
UBE3C-206ENST00000474153 ST20-MTHFSA0A0A6YYL1 179 aa8.46□□□□□ -1.06
UBE3C-206ENST00000474153 CHRNA2Q15822 529 aa8.46□□□□□ -1.06
UBE3C-206ENST00000474153 TCP11L2Q8N4U5 519 aa8.46□□□□□ -1.06
UBE3C-206ENST00000474153 ZNF692Q9BU19 519 aaPredicted RBP8.46□□□□□ -1.06
UBE3C-206ENST00000474153 CABP1Q9NZU7 370 aa8.46□□□□□ -1.06
UBE3C-206ENST00000474153 USP35Q9P2H5 1018 aa8.46□□□□□ -1.06
UBE3C-206ENST00000474153 TTC21AQ8NDW8 1320 aa8.46□□□□□ -1.06
UBE3C-206ENST00000474153 ZC3H6P61129 1189 aaKnown RBP8.45□□□□□ -1.06
UBE3C-206ENST00000474153 ANKRD36BQ8N2N9 1353 aa8.45□□□□□ -1.06
UBE3C-206ENST00000474153 COL5A2P05997 1499 aaPredicted RBP8.45□□□□□ -1.06
UBE3C-206ENST00000474153 PLSCR1O15162 318 aa8.44□□□□□ -1.06
UBE3C-206ENST00000474153 KTN1Q86UP2 1357 aaKnown RBP8.44□□□□□ -1.06
UBE3C-206ENST00000474153 LARP1Q6PKG0 1096 aaKnown RBP8.43□□□□□ -1.06
UBE3C-206ENST00000474153 NLRP13Q86W25 1043 aa8.43□□□□□ -1.06
UBE3C-206ENST00000474153 ABTB2Q8N961 1025 aa8.43□□□□□ -1.06
UBE3C-206ENST00000474153 CCER1Q8TC90 406 aaPredicted RBP8.43□□□□□ -1.06
UBE3C-206ENST00000474153 TTC21BQ7Z4L5 1316 aa8.43□□□□□ -1.06
UBE3C-206ENST00000474153 OVOS2A0A0G2JMS6 1433 aa8.42□□□□□ -1.06
UBE3C-206ENST00000474153 PKD1L3Q7Z443 1732 aa8.41□□□□□ -1.06
UBE3C-206ENST00000474153 AATKQ6ZMQ8 1374 aa8.41□□□□□ -1.06
UBE3C-206ENST00000474153 GCP02774 474 aa8.41□□□□□ -1.06
UBE3C-206ENST00000474153 TMF1P82094 1093 aa8.41□□□□□ -1.06
UBE3C-206ENST00000474153 NUTM2GQ5VZR2 741 aa8.41□□□□□ -1.06
UBE3C-206ENST00000474153 CRB1P82279 1406 aa8.4□□□□□ -1.06
UBE3C-206ENST00000474153 BCL11BQ9C0K0 894 aaPredicted RBP8.4□□□□□ -1.06
UBE3C-206ENST00000474153 SLC12A5Q9H2X9 1139 aa8.4□□□□□ -1.06
UBE3C-206ENST00000474153 DDB1Q16531 1140 aa8.39□□□□□ -1.07
UBE3C-206ENST00000474153 CDCA7Q9BWT1 371 aaPredicted RBP8.39□□□□□ -1.07
UBE3C-206ENST00000474153 CASZ1Q86V15 1759 aa8.39□□□□□ -1.07
UBE3C-206ENST00000474153 CHD4Q14839 1912 aa8.39□□□□□ -1.07
UBE3C-206ENST00000474153 BCL9O00512 1426 aa8.38□□□□□ -1.07
UBE3C-206ENST00000474153 NHSQ6T4R5 1651 aa8.38□□□□□ -1.07
UBE3C-206ENST00000474153 EIF4G2P78344 907 aaKnown RBP eCLIP8.38□□□□□ -1.07
UBE3C-206ENST00000474153 CDCA8Q53HL2 280 aa8.38□□□□□ -1.07
UBE3C-206ENST00000474153 ARHGEF25Q86VW2 580 aa8.38□□□□□ -1.07
UBE3C-206ENST00000474153 ZNF784Q8NCA9 323 aaPredicted RBP8.38□□□□□ -1.07
UBE3C-206ENST00000474153 TERF2IPQ9NYB0 399 aa8.38□□□□□ -1.07
UBE3C-206ENST00000474153 ITGB4P16144 1822 aa8.38□□□□□ -1.07
UBE3C-206ENST00000474153 PTGER2P43116 358 aa8.37□□□□□ -1.07
UBE3C-206ENST00000474153 NLRP6P59044 892 aa8.37□□□□□ -1.07
UBE3C-206ENST00000474153 TOM1L2Q6ZVM7 507 aa8.37□□□□□ -1.07
UBE3C-206ENST00000474153 HDGFL2Q7Z4V5 671 aaPredicted RBP8.37□□□□□ -1.07
UBE3C-206ENST00000474153 KCNH5Q8NCM2 988 aa8.37□□□□□ -1.07
UBE3C-206ENST00000474153 ANO8Q9HCE9 1232 aaPredicted RBP8.37□□□□□ -1.07
UBE3C-206ENST00000474153 LY75O60449 1722 aa8.37□□□□□ -1.07
UBE3C-206ENST00000474153 HSPA5P11021 654 aaKnown RBP8.36□□□□□ -1.07
UBE3C-206ENST00000474153 PROM2Q8N271 834 aa8.36□□□□□ -1.07
UBE3C-206ENST00000474153 SYT17Q9BSW7 474 aa8.36□□□□□ -1.07
UBE3C-206ENST00000474153 MTFR1LQ9H019 292 aa8.36□□□□□ -1.07
UBE3C-206ENST00000474153 STK32BQ9NY57 414 aa8.36□□□□□ -1.07
UBE3C-206ENST00000474153 QSER1Q2KHR3 1735 aa8.36□□□□□ -1.07
UBE3C-206ENST00000474153 DOT1LQ8TEK3 1739 aa8.36□□□□□ -1.07
UBE3C-206ENST00000474153 NCAPD2Q15021 1401 aa8.36□□□□□ -1.07
UBE3C-206ENST00000474153 SMG6Q86US8 1419 aaKnown RBP8.36□□□□□ -1.07
UBE3C-206ENST00000474153 BTAF1O14981 1849 aa8.36□□□□□ -1.07
UBE3C-206ENST00000474153 RTL1A6NKG5 1358 aa8.35□□□□□ -1.07
UBE3C-206ENST00000474153 KIF24Q5T7B8 1368 aa8.35□□□□□ -1.07
UBE3C-206ENST00000474153 WDR17Q8IZU2 1322 aa8.35□□□□□ -1.07
UBE3C-206ENST00000474153 ZBTB7AO95365 584 aa8.35□□□□□ -1.07
UBE3C-206ENST00000474153 C1QTNF8P60827 252 aa8.35□□□□□ -1.07
UBE3C-206ENST00000474153 SLC15A2Q16348 729 aa8.35□□□□□ -1.07
UBE3C-206ENST00000474153 TXNRD1Q16881 649 aa8.35□□□□□ -1.07
UBE3C-206ENST00000474153 NME9Q86XW9 330 aa8.35□□□□□ -1.07
UBE3C-206ENST00000474153 FHDC1Q9C0D6 1143 aaPredicted RBP8.35□□□□□ -1.07
UBE3C-206ENST00000474153 ATF5Q9Y2D1 282 aaPredicted RBP8.35□□□□□ -1.07
UBE3C-206ENST00000474153 NSD3Q9BZ95 1437 aa8.35□□□□□ -1.07
UBE3C-206ENST00000474153 TOGARAM1Q9Y4F4 1720 aa8.34□□□□□ -1.07
UBE3C-206ENST00000474153 TAF1LQ8IZX4 1826 aa8.34□□□□□ -1.07
UBE3C-206ENST00000474153 SENP3-EIF4A1A0A087X0R7 540 aa8.34□□□□□ -1.07
UBE3C-206ENST00000474153 MARCH10Q8NA82 808 aaPredicted RBP8.34□□□□□ -1.07
UBE3C-206ENST00000474153 TMC1Q8TDI8 760 aa8.34□□□□□ -1.07
UBE3C-206ENST00000474153 PDGFDQ9GZP0 370 aaPredicted RBP8.34□□□□□ -1.07
UBE3C-206ENST00000474153 AXIN2Q9Y2T1 843 aa8.34□□□□□ -1.07
UBE3C-206ENST00000474153 NSD2O96028 1365 aa8.34□□□□□ -1.07
UBE3C-206ENST00000474153 ERBB3P21860 1342 aa8.33□□□□□ -1.08
UBE3C-206ENST00000474153 KAT6BQ8WYB5 2073 aa8.33□□□□□ -1.08
UBE3C-206ENST00000474153 ZBTB7CA1YPR0 619 aa8.33□□□□□ -1.08
UBE3C-206ENST00000474153 EXOC5O00471 708 aa8.33□□□□□ -1.08
UBE3C-206ENST00000474153 FYB1O15117 783 aa8.33□□□□□ -1.08
UBE3C-206ENST00000474153 SGIP1Q9BQI5 828 aa8.33□□□□□ -1.08
UBE3C-206ENST00000474153 CARD10Q9BWT7 1032 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms