RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 BRD4O60885 1362 aaPredicted RBP29.23■■■□□ 2.27
APP-215ENST00000474136 SLIT3O75094 1523 aa29.23■■■□□ 2.27
APP-215ENST00000474136 KIAA1210Q9ULL0 1709 aa29.22■■■□□ 2.27
APP-215ENST00000474136 SBF2Q86WG5 1849 aa29.22■■■□□ 2.27
APP-215ENST00000474136 RGPD3A6NKT7 1758 aaPredicted RBP29.21■■■□□ 2.27
APP-215ENST00000474136 RGPD4Q7Z3J3 1758 aa29.21■■■□□ 2.27
APP-215ENST00000474136 CASZ1Q86V15 1759 aa29.2■■■□□ 2.27
APP-215ENST00000474136 WDR17Q8IZU2 1322 aa29.2■■■□□ 2.26
APP-215ENST00000474136 PTGER2P43116 358 aa29.18■■■□□ 2.26
APP-215ENST00000474136 ATF5Q9Y2D1 282 aaPredicted RBP29.18■■■□□ 2.26
APP-215ENST00000474136 COL18A1P39060 1754 aa29.17■■■□□ 2.26
APP-215ENST00000474136 SOX12O15370 315 aa29.14■■■□□ 2.25
APP-215ENST00000474136 TXNRD1Q16881 649 aa29.14■■■□□ 2.25
APP-215ENST00000474136 ARHGEF25Q86VW2 580 aa29.14■■■□□ 2.25
APP-215ENST00000474136 CDCA7Q9BWT1 371 aaPredicted RBP29.14■■■□□ 2.25
APP-215ENST00000474136 BCL9O00512 1426 aa29.14■■■□□ 2.25
APP-215ENST00000474136 CPSF1Q10570 1443 aaKnown RBP29.14■■■□□ 2.25
APP-215ENST00000474136 PIK3C2AO00443 1686 aa29.13■■■□□ 2.25
APP-215ENST00000474136 MYOM1P52179 1685 aa29.12■■■□□ 2.25
APP-215ENST00000474136 STK32BQ9NY57 414 aa29.12■■■□□ 2.25
APP-215ENST00000474136 CSB-PGBD3P0DP91 1061 aa29.11■■■□□ 2.25
APP-215ENST00000474136 CARD10Q9BWT7 1032 aa29.11■■■□□ 2.25
APP-215ENST00000474136 PCGF6Q9BYE7 350 aa29.11■■■□□ 2.25
APP-215ENST00000474136 QRICH2Q9H0J4 1663 aa29.11■■■□□ 2.25
APP-215ENST00000474136 SLC15A2Q16348 729 aa29.1■■■□□ 2.25
APP-215ENST00000474136 WNK3Q9BYP7 1800 aa29.1■■■□□ 2.25
APP-215ENST00000474136 ZNF784Q8NCA9 323 aaPredicted RBP29.09■■■□□ 2.25
APP-215ENST00000474136 TTC21BQ7Z4L5 1316 aa29.08■■■□□ 2.25
APP-215ENST00000474136 FHDC1Q9C0D6 1143 aaPredicted RBP29.08■■■□□ 2.25
APP-215ENST00000474136 UTRNP46939 3433 aa29.08■■■□□ 2.25
APP-215ENST00000474136 EXOC5O00471 708 aa29.07■■■□□ 2.24
APP-215ENST00000474136 SYT17Q9BSW7 474 aa29.07■■■□□ 2.24
APP-215ENST00000474136 KCNH5Q8NCM2 988 aa29.06■■■□□ 2.24
APP-215ENST00000474136 AKAP12Q02952 1782 aa29.05■■■□□ 2.24
APP-215ENST00000474136 EVC2Q86UK5 1308 aa29.05■■■□□ 2.24
APP-215ENST00000474136 RGPD5Q99666 1765 aa29.03■■■□□ 2.24
APP-215ENST00000474136 SGIP1Q9BQI5 828 aa29.02■■■□□ 2.24
APP-215ENST00000474136 MTFR1LQ9H019 292 aa29.02■■■□□ 2.24
APP-215ENST00000474136 ACSBG1Q96GR2 724 aa29.01■■■□□ 2.23
APP-215ENST00000474136 ZNF692Q9BU19 519 aaPredicted RBP29.01■■■□□ 2.23
APP-215ENST00000474136 CCDC7Q96M83 1385 aa28.99■■■□□ 2.23
APP-215ENST00000474136 TNS2Q63HR2 1409 aa28.99■■■□□ 2.23
APP-215ENST00000474136 NFAT5O94916 1531 aa28.99■■■□□ 2.23
APP-215ENST00000474136 TTC21AQ8NDW8 1320 aa28.98■■■□□ 2.23
APP-215ENST00000474136 L3MBTL2Q969R5 705 aa28.96■■■□□ 2.23
APP-215ENST00000474136 TRPM1Q7Z4N2 1603 aa28.95■■■□□ 2.22
APP-215ENST00000474136 ARXQ96QS3 562 aa28.94■■■□□ 2.22
APP-215ENST00000474136 KTN1Q86UP2 1357 aaKnown RBP28.93■■■□□ 2.22
APP-215ENST00000474136 ZNF827Q17R98 1081 aa28.92■■■□□ 2.22
APP-215ENST00000474136 NLRP2Q9NX02 1062 aa28.92■■■□□ 2.22
APP-215ENST00000474136 NHSQ6T4R5 1651 aa28.91■■■□□ 2.22
APP-215ENST00000474136 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.91■■■□□ 2.22
APP-215ENST00000474136 ERBB3P21860 1342 aa28.89■■■□□ 2.22
APP-215ENST00000474136 ABCC6O95255 1503 aa28.88■■■□□ 2.21
APP-215ENST00000474136 PAPPAQ13219 1627 aa28.88■■■□□ 2.21
APP-215ENST00000474136 SENP3-EIF4A1A0A087X0R7 540 aa28.88■■■□□ 2.21
APP-215ENST00000474136 LRRC4BQ9NT99 713 aa28.88■■■□□ 2.21
APP-215ENST00000474136 IL2RBP14784 551 aa28.87■■■□□ 2.21
APP-215ENST00000474136 NME9Q86XW9 330 aa28.86■■■□□ 2.21
APP-215ENST00000474136 ROCK2O75116 1388 aaKnown RBP28.86■■■□□ 2.21
APP-215ENST00000474136 C1QTNF8P60827 252 aa28.85■■■□□ 2.21
APP-215ENST00000474136 MAP3K5Q99683 1374 aa28.85■■■□□ 2.21
APP-215ENST00000474136 USP31Q70CQ4 1352 aa28.84■■■□□ 2.21
APP-215ENST00000474136 ANKRD24Q8TF21 1146 aa28.83■■■□□ 2.21
APP-215ENST00000474136 SIN3AQ96ST3 1273 aa28.83■■■□□ 2.21
APP-215ENST00000474136 BTAF1O14981 1849 aa28.81■■■□□ 2.2
APP-215ENST00000474136 GPR162Q16538 588 aa28.81■■■□□ 2.2
APP-215ENST00000474136 CHD4Q14839 1912 aa28.81■■■□□ 2.2
APP-215ENST00000474136 KLHL34Q8N239 644 aa28.8■■■□□ 2.2
APP-215ENST00000474136 AKT1S1Q96B36 256 aa28.8■■■□□ 2.2
APP-215ENST00000474136 SBNO2Q9Y2G9 1366 aa28.79■■■□□ 2.2
APP-215ENST00000474136 MON2Q7Z3U7 1717 aa28.78■■■□□ 2.2
APP-215ENST00000474136 CD163L1Q9NR16 1453 aa28.77■■■□□ 2.2
APP-215ENST00000474136 KCNQ4P56696 695 aa28.75■■■□□ 2.19
APP-215ENST00000474136 DDX54Q8TDD1 881 aaKnown RBP28.75■■■□□ 2.19
APP-215ENST00000474136 KAT6BQ8WYB5 2073 aa28.75■■■□□ 2.19
APP-215ENST00000474136 NEUROD1Q13562 356 aa28.74■■■□□ 2.19
APP-215ENST00000474136 PELP1Q8IZL8 1130 aaKnown RBP28.74■■■□□ 2.19
APP-215ENST00000474136 TMC1Q8TDI8 760 aa28.74■■■□□ 2.19
APP-215ENST00000474136 PNPLA7Q6ZV29 1317 aa28.74■■■□□ 2.19
APP-215ENST00000474136 USP54Q70EL1 1684 aa28.73■■■□□ 2.19
APP-215ENST00000474136 SLC27A3Q5K4L6 730 aa28.72■■■□□ 2.19
APP-215ENST00000474136 SLC16A10Q8TF71 515 aa28.72■■■□□ 2.19
APP-215ENST00000474136 SLC12A5Q9H2X9 1139 aa28.72■■■□□ 2.19
APP-215ENST00000474136 LTN1O94822 1766 aa28.72■■■□□ 2.19
APP-215ENST00000474136 POLD1P28340 1107 aa28.71■■■□□ 2.19
APP-215ENST00000474136 NLGN2Q8NFZ4 835 aa28.7■■■□□ 2.19
APP-215ENST00000474136 LTV1Q96GA3 475 aaPredicted RBP28.7■■■□□ 2.19
APP-215ENST00000474136 GOLGB1Q14789 3259 aaKnown RBP28.7■■■□□ 2.18
APP-215ENST00000474136 HDGFL2Q7Z4V5 671 aaPredicted RBP28.69■■■□□ 2.18
APP-215ENST00000474136 TFCP2L1Q9NZI6 479 aa28.69■■■□□ 2.18
APP-215ENST00000474136 GIGYF1O75420 1035 aaPredicted RBP28.68■■■□□ 2.18
APP-215ENST00000474136 SYTL4Q96C24 671 aaPredicted RBP28.68■■■□□ 2.18
APP-215ENST00000474136 PRIM1P49642 420 aaKnown RBP28.67■■■□□ 2.18
APP-215ENST00000474136 IP6K1Q92551 441 aa28.67■■■□□ 2.18
APP-215ENST00000474136 EDC4Q6P2E9 1401 aaKnown RBP28.66■■■□□ 2.18
APP-215ENST00000474136 A0A1W2PP64 1363 aa28.63■■■□□ 2.17
APP-215ENST00000474136 QSER1Q2KHR3 1735 aa28.62■■■□□ 2.17
APP-215ENST00000474136 CARD11Q9BXL7 1154 aa28.62■■■□□ 2.17
APP-215ENST00000474136 NSD2O96028 1365 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms