RNA–Protein interactions for RNA: ENST00000473820.1

PPP2R1A-208, Transcript of protein phosphatase 2 scaffold subunit Aalpha, human

TSL 2

Gene PPP2R1A, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP2R1A-208	ENST00000473820	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.98	□□□□□ -0.17
PPP2R1A-208	ENST00000473820	CABP2	Q9NPB3	220 aa		13.98	□□□□□ -0.17
PPP2R1A-208	ENST00000473820	SENP3-EIF4A1	A0A087X0R7	540 aa		13.97	□□□□□ -0.17
PPP2R1A-208	ENST00000473820	PTF1A	Q7RTS3	328 aa		13.97	□□□□□ -0.17
PPP2R1A-208	ENST00000473820	SYT17	Q9BSW7	474 aa		13.97	□□□□□ -0.17
PPP2R1A-208	ENST00000473820	COL5A2	P05997	1499 aa	Predicted RBP	13.97	□□□□□ -0.17
PPP2R1A-208	ENST00000473820	UTRN	P46939	3433 aa		13.96	□□□□□ -0.17
PPP2R1A-208	ENST00000473820	EXOC5	O00471	708 aa		13.96	□□□□□ -0.17
PPP2R1A-208	ENST00000473820	TXNRD1	Q16881	649 aa		13.96	□□□□□ -0.17
PPP2R1A-208	ENST00000473820	PROM2	Q8N271	834 aa		13.96	□□□□□ -0.17
PPP2R1A-208	ENST00000473820	MARCH10	Q8NA82	808 aa	Predicted RBP	13.96	□□□□□ -0.17
PPP2R1A-208	ENST00000473820	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.96	□□□□□ -0.17
PPP2R1A-208	ENST00000473820	TRPM1	Q7Z4N2	1603 aa		13.96	□□□□□ -0.17
PPP2R1A-208	ENST00000473820	PPIP5K1	Q6PFW1	1433 aa		13.96	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	NRK	Q7Z2Y5	1582 aa		13.96	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	SOX12	O15370	315 aa		13.95	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	SLC15A2	Q16348	729 aa		13.95	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	CABP1	Q9NZU7	370 aa		13.95	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	AATK	Q6ZMQ8	1374 aa		13.95	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	PTGER2	P43116	358 aa		13.94	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	DIEXF	Q68CQ4	756 aa	Known RBP	13.94	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.94	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	PARP4	Q9UKK3	1724 aa	Known RBP	13.94	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	EVC2	Q86UK5	1308 aa		13.93	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	WDR17	Q8IZU2	1322 aa		13.93	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	MTFR1L	Q9H019	292 aa		13.93	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	AXIN2	Q9Y2T1	843 aa		13.93	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	LMO7	Q8WWI1	1683 aa		13.93	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	BRD4	O60885	1362 aa	Predicted RBP	13.93	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	ST20-MTHFS	A0A0A6YYL1	179 aa		13.92	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	C1QTNF8	P60827	252 aa		13.91	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	GPR162	Q16538	588 aa		13.91	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	KCNH5	Q8NCM2	988 aa		13.91	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	ARX	Q96QS3	562 aa		13.91	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	CARD10	Q9BWT7	1032 aa		13.91	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	KLHL34	Q8N239	644 aa		13.9	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	SBF2	Q86WG5	1849 aa		13.9	□□□□□ -0.18
PPP2R1A-208	ENST00000473820	ACSBG1	Q96GR2	724 aa		13.89	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	TOPAZ1	Q8N9V7	1692 aa		13.88	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	PEAK1	Q9H792	1746 aa		13.88	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	ARHGEF25	Q86VW2	580 aa		13.88	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	PELP1	Q8IZL8	1130 aa	Known RBP	13.88	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	ZNF692	Q9BU19	519 aa	Predicted RBP	13.88	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.88	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	RGPD4	Q7Z3J3	1758 aa		13.88	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	USP6	P35125	1406 aa		13.88	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	CASZ1	Q86V15	1759 aa		13.87	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	MYOM1	P52179	1685 aa		13.87	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	LRRC37A3	O60309	1634 aa		13.86	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	KAT6B	Q8WYB5	2073 aa		13.86	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	BCL9	O00512	1426 aa		13.86	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	USP47	Q96K76	1375 aa		13.85	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	TMC1	Q8TDI8	760 aa		13.85	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	TESK2	Q96S53	571 aa		13.85	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	NLRP2	Q9NX02	1062 aa		13.85	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	TTC21B	Q7Z4L5	1316 aa		13.85	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	QRICH2	Q9H0J4	1663 aa		13.85	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	CCDC7	Q96M83	1385 aa		13.84	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	SLC24A1	O60721	1099 aa		13.84	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	GIGYF1	O75420	1035 aa	Predicted RBP	13.84	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	POLD1	P28340	1107 aa		13.84	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	SGIP1	Q9BQI5	828 aa		13.84	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	CHD4	Q14839	1912 aa		13.84	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	SBNO2	Q9Y2G9	1366 aa		13.83	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	AKAP12	Q02952	1782 aa		13.83	□□□□□ -0.19
PPP2R1A-208	ENST00000473820	CPSF1	Q10570	1443 aa	Known RBP	13.83	□□□□□ -0.2
PPP2R1A-208	ENST00000473820	SLIT3	O75094	1523 aa		13.83	□□□□□ -0.2
PPP2R1A-208	ENST00000473820	TMF1	P82094	1093 aa		13.82	□□□□□ -0.2
PPP2R1A-208	ENST00000473820	IL2RB	P14784	551 aa		13.81	□□□□□ -0.2
PPP2R1A-208	ENST00000473820	SLC12A5	Q9H2X9	1139 aa		13.81	□□□□□ -0.2
PPP2R1A-208	ENST00000473820	TTC21A	Q8NDW8	1320 aa		13.81	□□□□□ -0.2
PPP2R1A-208	ENST00000473820	COL18A1	P39060	1754 aa		13.81	□□□□□ -0.2
PPP2R1A-208	ENST00000473820	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
PPP2R1A-208	ENST00000473820	IFFO2	Q5TF58	517 aa		13.8	□□□□□ -0.2
PPP2R1A-208	ENST00000473820	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
PPP2R1A-208	ENST00000473820	SLC16A10	Q8TF71	515 aa		13.8	□□□□□ -0.2
PPP2R1A-208	ENST00000473820	TFCP2L1	Q9NZI6	479 aa		13.8	□□□□□ -0.2
PPP2R1A-208	ENST00000473820	ZNF827	Q17R98	1081 aa		13.79	□□□□□ -0.2
PPP2R1A-208	ENST00000473820	DDX54	Q8TDD1	881 aa	Known RBP	13.79	□□□□□ -0.2
PPP2R1A-208	ENST00000473820	PUS7	Q96PZ0	661 aa	Known RBP	13.79	□□□□□ -0.2
PPP2R1A-208	ENST00000473820	RGPD5	Q99666	1765 aa		13.78	□□□□□ -0.2
PPP2R1A-208	ENST00000473820	MSH5	O43196	834 aa		13.78	□□□□□ -0.2
PPP2R1A-208	ENST00000473820	HSPA5	P11021	654 aa	Known RBP	13.78	□□□□□ -0.2
PPP2R1A-208	ENST00000473820	SYTL4	Q96C24	671 aa	Predicted RBP	13.78	□□□□□ -0.2
PPP2R1A-208	ENST00000473820	KTN1	Q86UP2	1357 aa	Known RBP	13.78	□□□□□ -0.2
PPP2R1A-208	ENST00000473820	PIK3C2A	O00443	1686 aa		13.77	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	CDCA8	Q53HL2	280 aa		13.77	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	SLC27A3	Q5K4L6	730 aa		13.77	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	TNS2	Q63HR2	1409 aa		13.77	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.77	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	MAP3K5	Q99683	1374 aa		13.77	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	POLR3GL	Q9BT43	218 aa		13.77	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	WNK3	Q9BYP7	1800 aa		13.77	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	LRRC4B	Q9NT99	713 aa		13.77	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	TERF2IP	Q9NYB0	399 aa		13.77	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	GRIN3B	O60391	1043 aa		13.76	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	ANKRD24	Q8TF21	1146 aa		13.76	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	ERBB3	P21860	1342 aa		13.75	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	AKT1S1	Q96B36	256 aa		13.75	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	GOLGB1	Q14789	3259 aa	Known RBP	13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms