RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 PTF1AQ7RTS3 328 aa18.26■□□□□ 0.51
SHROOM3-204ENST00000473602 ZNF692Q9BU19 519 aaPredicted RBP18.26■□□□□ 0.51
SHROOM3-204ENST00000473602 LMO7Q8WWI1 1683 aa18.25■□□□□ 0.51
SHROOM3-204ENST00000473602 CRB1P82279 1406 aa18.25■□□□□ 0.51
SHROOM3-204ENST00000473602 CPSF1Q10570 1443 aaKnown RBP18.25■□□□□ 0.51
SHROOM3-204ENST00000473602 NLRP6P59044 892 aa18.25■□□□□ 0.51
SHROOM3-204ENST00000473602 DDB1Q16531 1140 aa18.25■□□□□ 0.51
SHROOM3-204ENST00000473602 ANO8Q9HCE9 1232 aaPredicted RBP18.25■□□□□ 0.51
SHROOM3-204ENST00000473602 OVOS2A0A0G2JMS6 1433 aa18.24■□□□□ 0.51
SHROOM3-204ENST00000473602 OVOS2A0A0J9YW53 1432 aa18.24■□□□□ 0.51
SHROOM3-204ENST00000473602 OVOS2Q6IE36 1432 aa18.24■□□□□ 0.51
SHROOM3-204ENST00000473602 ST20-MTHFSA0A0A6YYL1 179 aa18.24■□□□□ 0.51
SHROOM3-204ENST00000473602 TOM1L2Q6ZVM7 507 aa18.24■□□□□ 0.51
SHROOM3-204ENST00000473602 TESK2Q96S53 571 aa18.24■□□□□ 0.51
SHROOM3-204ENST00000473602 BCL11BQ9C0K0 894 aaPredicted RBP18.24■□□□□ 0.51
SHROOM3-204ENST00000473602 PDGFDQ9GZP0 370 aaPredicted RBP18.24■□□□□ 0.51
SHROOM3-204ENST00000473602 USP47Q96K76 1375 aa18.24■□□□□ 0.51
SHROOM3-204ENST00000473602 PIK3C2AO00443 1686 aa18.24■□□□□ 0.51
SHROOM3-204ENST00000473602 PROM2Q8N271 834 aa18.23■□□□□ 0.51
SHROOM3-204ENST00000473602 AATKQ6ZMQ8 1374 aa18.22■□□□□ 0.51
SHROOM3-204ENST00000473602 ZBTB7AO95365 584 aa18.21■□□□□ 0.51
SHROOM3-204ENST00000473602 MARCH10Q8NA82 808 aaPredicted RBP18.21■□□□□ 0.51
SHROOM3-204ENST00000473602 AXIN2Q9Y2T1 843 aa18.21■□□□□ 0.51
SHROOM3-204ENST00000473602 SLIT3O75094 1523 aa18.21■□□□□ 0.51
SHROOM3-204ENST00000473602 TTC21AQ8NDW8 1320 aa18.21■□□□□ 0.51
SHROOM3-204ENST00000473602 UTRNP46939 3433 aa18.2■□□□□ 0.5
SHROOM3-204ENST00000473602 KTN1Q86UP2 1357 aaKnown RBP18.2■□□□□ 0.5
SHROOM3-204ENST00000473602 CD163L1Q9NR16 1453 aa18.19■□□□□ 0.5
SHROOM3-204ENST00000473602 USP54Q70EL1 1684 aa18.18■□□□□ 0.5
SHROOM3-204ENST00000473602 PARP4Q9UKK3 1724 aaKnown RBP18.18■□□□□ 0.5
SHROOM3-204ENST00000473602 ATF5Q9Y2D1 282 aaPredicted RBP18.18■□□□□ 0.5
SHROOM3-204ENST00000473602 TTC21BQ7Z4L5 1316 aa18.18■□□□□ 0.5
SHROOM3-204ENST00000473602 PTGER2P43116 358 aa18.17■□□□□ 0.5
SHROOM3-204ENST00000473602 WDR17Q8IZU2 1322 aa18.17■□□□□ 0.5
SHROOM3-204ENST00000473602 PEAK1Q9H792 1746 aa18.16■□□□□ 0.5
SHROOM3-204ENST00000473602 TMF1P82094 1093 aa18.16■□□□□ 0.5
SHROOM3-204ENST00000473602 HDGFL2Q7Z4V5 671 aaPredicted RBP18.16■□□□□ 0.5
SHROOM3-204ENST00000473602 TMC1Q8TDI8 760 aa18.16■□□□□ 0.5
SHROOM3-204ENST00000473602 CDCA7Q9BWT1 371 aaPredicted RBP18.16■□□□□ 0.5
SHROOM3-204ENST00000473602 TERF2IPQ9NYB0 399 aa18.16■□□□□ 0.5
SHROOM3-204ENST00000473602 EDC4Q6P2E9 1401 aaKnown RBP18.15■□□□□ 0.5
SHROOM3-204ENST00000473602 TXNRD1Q16881 649 aa18.15■□□□□ 0.5
SHROOM3-204ENST00000473602 ARHGEF25Q86VW2 580 aa18.15■□□□□ 0.5
SHROOM3-204ENST00000473602 STK32BQ9NY57 414 aa18.15■□□□□ 0.5
SHROOM3-204ENST00000473602 SOX12O15370 315 aa18.14■□□□□ 0.49
SHROOM3-204ENST00000473602 CSB-PGBD3P0DP91 1061 aa18.14■□□□□ 0.49
SHROOM3-204ENST00000473602 CDCA8Q53HL2 280 aa18.14■□□□□ 0.49
SHROOM3-204ENST00000473602 CARD10Q9BWT7 1032 aa18.14■□□□□ 0.49
SHROOM3-204ENST00000473602 SLC12A5Q9H2X9 1139 aa18.14■□□□□ 0.49
SHROOM3-204ENST00000473602 A0A1W2PP64 1363 aa18.14■□□□□ 0.49
SHROOM3-204ENST00000473602 EXOC5O00471 708 aa18.13■□□□□ 0.49
SHROOM3-204ENST00000473602 SLC15A2Q16348 729 aa18.13■□□□□ 0.49
SHROOM3-204ENST00000473602 ZNF784Q8NCA9 323 aaPredicted RBP18.13■□□□□ 0.49
SHROOM3-204ENST00000473602 BCL9O00512 1426 aa18.13■□□□□ 0.49
SHROOM3-204ENST00000473602 KCNH5Q8NCM2 988 aa18.12■□□□□ 0.49
SHROOM3-204ENST00000473602 SYT17Q9BSW7 474 aa18.12■□□□□ 0.49
SHROOM3-204ENST00000473602 USP31Q70CQ4 1352 aa18.12■□□□□ 0.49
SHROOM3-204ENST00000473602 LRRC37A3O60309 1634 aa18.12■□□□□ 0.49
SHROOM3-204ENST00000473602 FHDC1Q9C0D6 1143 aaPredicted RBP18.11■□□□□ 0.49
SHROOM3-204ENST00000473602 COL18A1P39060 1754 aa18.1■□□□□ 0.49
SHROOM3-204ENST00000473602 ANKRD36BQ8N2N9 1353 aa18.1■□□□□ 0.49
SHROOM3-204ENST00000473602 NFAT5O94916 1531 aa18.09■□□□□ 0.49
SHROOM3-204ENST00000473602 ABCC6O95255 1503 aa18.09■□□□□ 0.49
SHROOM3-204ENST00000473602 MTFR1LQ9H019 292 aa18.09■□□□□ 0.49
SHROOM3-204ENST00000473602 SBF2Q86WG5 1849 aa18.09■□□□□ 0.49
SHROOM3-204ENST00000473602 RGPD3A6NKT7 1758 aaPredicted RBP18.09■□□□□ 0.49
SHROOM3-204ENST00000473602 RGPD4Q7Z3J3 1758 aa18.09■□□□□ 0.49
SHROOM3-204ENST00000473602 CASZ1Q86V15 1759 aa18.09■□□□□ 0.49
SHROOM3-204ENST00000473602 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.08■□□□□ 0.48
SHROOM3-204ENST00000473602 MYOM1P52179 1685 aa18.08■□□□□ 0.48
SHROOM3-204ENST00000473602 SGIP1Q9BQI5 828 aa18.07■□□□□ 0.48
SHROOM3-204ENST00000473602 ACSBG1Q96GR2 724 aa18.06■□□□□ 0.48
SHROOM3-204ENST00000473602 LTN1O94822 1766 aa18.06■□□□□ 0.48
SHROOM3-204ENST00000473602 RGPD5Q99666 1765 aa18.05■□□□□ 0.48
SHROOM3-204ENST00000473602 EIF4G2P78344 907 aaKnown RBP eCLIP18.05■□□□□ 0.48
SHROOM3-204ENST00000473602 NME9Q86XW9 330 aa18.05■□□□□ 0.48
SHROOM3-204ENST00000473602 CCDC7Q96M83 1385 aa18.04■□□□□ 0.48
SHROOM3-204ENST00000473602 ARXQ96QS3 562 aa18.04■□□□□ 0.48
SHROOM3-204ENST00000473602 KIF20BQ96Q89 1820 aa18.02■□□□□ 0.48
SHROOM3-204ENST00000473602 NLRP2Q9NX02 1062 aa18.02■□□□□ 0.48
SHROOM3-204ENST00000473602 WNK3Q9BYP7 1800 aa18■□□□□ 0.47
SHROOM3-204ENST00000473602 TNS2Q63HR2 1409 aa18■□□□□ 0.47
SHROOM3-204ENST00000473602 SENP3-EIF4A1A0A087X0R7 540 aa18■□□□□ 0.47
SHROOM3-204ENST00000473602 HSPA5P11021 654 aaKnown RBP17.99■□□□□ 0.47
SHROOM3-204ENST00000473602 C1QTNF8P60827 252 aa17.99■□□□□ 0.47
SHROOM3-204ENST00000473602 IL2RBP14784 551 aa17.98■□□□□ 0.47
SHROOM3-204ENST00000473602 ZNF827Q17R98 1081 aa17.98■□□□□ 0.47
SHROOM3-204ENST00000473602 COG3Q96JB2 828 aa17.98■□□□□ 0.47
SHROOM3-204ENST00000473602 LRRC4BQ9NT99 713 aa17.98■□□□□ 0.47
SHROOM3-204ENST00000473602 ERBB3P21860 1342 aa17.98■□□□□ 0.47
SHROOM3-204ENST00000473602 GPR162Q16538 588 aa17.97■□□□□ 0.47
SHROOM3-204ENST00000473602 FAM208AQ9UK61 1670 aaKnown RBP17.96■□□□□ 0.47
SHROOM3-204ENST00000473602 MAP3K5Q99683 1374 aa17.95■□□□□ 0.46
SHROOM3-204ENST00000473602 ANKRD24Q8TF21 1146 aa17.95■□□□□ 0.46
SHROOM3-204ENST00000473602 KLHL34Q8N239 644 aa17.94■□□□□ 0.46
SHROOM3-204ENST00000473602 AKT1S1Q96B36 256 aa17.94■□□□□ 0.46
SHROOM3-204ENST00000473602 GOLGB1Q14789 3259 aaKnown RBP17.94■□□□□ 0.46
SHROOM3-204ENST00000473602 NSD3Q9BZ95 1437 aa17.93■□□□□ 0.46
SHROOM3-204ENST00000473602 FYB1O15117 783 aa17.93■□□□□ 0.46
SHROOM3-204ENST00000473602 DDX54Q8TDD1 881 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms