RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 KIF20BQ96Q89 1820 aa16.05■□□□□ 0.16
CPNE1-222ENST00000473373 SPATA31A1Q5TZJ5 1347 aa16.05■□□□□ 0.16
CPNE1-222ENST00000473373 NME9Q86XW9 330 aa16.05■□□□□ 0.16
CPNE1-222ENST00000473373 EZH2Q15910 746 aaKnown RBP16.04■□□□□ 0.16
CPNE1-222ENST00000473373 LARP1Q6PKG0 1096 aaKnown RBP16.04■□□□□ 0.16
CPNE1-222ENST00000473373 TOM1L2Q6ZVM7 507 aa16.04■□□□□ 0.16
CPNE1-222ENST00000473373 CD163L1Q9NR16 1453 aa16.03■□□□□ 0.16
CPNE1-222ENST00000473373 USP54Q70EL1 1684 aa16.03■□□□□ 0.16
CPNE1-222ENST00000473373 THSD7AQ9UPZ6 1657 aa16.03■□□□□ 0.16
CPNE1-222ENST00000473373 COL5A2P05997 1499 aaPredicted RBP16.03■□□□□ 0.16
CPNE1-222ENST00000473373 AATKQ6ZMQ8 1374 aa16.02■□□□□ 0.16
CPNE1-222ENST00000473373 EIF4G2P78344 907 aaKnown RBP eCLIP16.02■□□□□ 0.16
CPNE1-222ENST00000473373 PDE3BQ13370 1112 aa16.02■□□□□ 0.16
CPNE1-222ENST00000473373 TCP11L2Q8N4U5 519 aa16.02■□□□□ 0.16
CPNE1-222ENST00000473373 WNK3Q9BYP7 1800 aa16.02■□□□□ 0.16
CPNE1-222ENST00000473373 COL18A1P39060 1754 aa16.02■□□□□ 0.15
CPNE1-222ENST00000473373 RGPD1P0DJD0 1748 aa16.02■□□□□ 0.15
CPNE1-222ENST00000473373 KAT6BQ8WYB5 2073 aa16.01■□□□□ 0.15
CPNE1-222ENST00000473373 TRIM37O94972 964 aa16.01■□□□□ 0.15
CPNE1-222ENST00000473373 COG3Q96JB2 828 aa16.01■□□□□ 0.15
CPNE1-222ENST00000473373 CRB1P82279 1406 aa16.01■□□□□ 0.15
CPNE1-222ENST00000473373 ANKRD36BQ8N2N9 1353 aa16■□□□□ 0.15
CPNE1-222ENST00000473373 MYOM1P52179 1685 aa16■□□□□ 0.15
CPNE1-222ENST00000473373 ADRA2BP18089 450 aa16■□□□□ 0.15
CPNE1-222ENST00000473373 NFAT5O94916 1531 aa15.99■□□□□ 0.15
CPNE1-222ENST00000473373 THRAP3Q9Y2W1 955 aaKnown RBP15.99■□□□□ 0.15
CPNE1-222ENST00000473373 APBA3O96018 575 aa15.98■□□□□ 0.15
CPNE1-222ENST00000473373 ARHGEF25Q86VW2 580 aa15.98■□□□□ 0.15
CPNE1-222ENST00000473373 CAMKK2Q96RR4 588 aa15.98■□□□□ 0.15
CPNE1-222ENST00000473373 PARP4Q9UKK3 1724 aaKnown RBP15.98■□□□□ 0.15
CPNE1-222ENST00000473373 USP31Q70CQ4 1352 aa15.98■□□□□ 0.15
CPNE1-222ENST00000473373 FAM196AQ6ZSG2 479 aa15.97■□□□□ 0.15
CPNE1-222ENST00000473373 BARGINQ6ZT62 677 aa15.97■□□□□ 0.15
CPNE1-222ENST00000473373 WDR17Q8IZU2 1322 aa15.96■□□□□ 0.15
CPNE1-222ENST00000473373 ABCC6O95255 1503 aa15.96■□□□□ 0.15
CPNE1-222ENST00000473373 HSPA5P11021 654 aaKnown RBP15.95■□□□□ 0.14
CPNE1-222ENST00000473373 AXIN2Q9Y2T1 843 aa15.95■□□□□ 0.14
CPNE1-222ENST00000473373 OVOS2A0A0J9YW53 1432 aa15.94■□□□□ 0.14
CPNE1-222ENST00000473373 DISP2A7MBM2 1401 aa15.94■□□□□ 0.14
CPNE1-222ENST00000473373 OVOS2Q6IE36 1432 aa15.94■□□□□ 0.14
CPNE1-222ENST00000473373 TNS1Q9HBL0 1735 aaKnown RBP15.94■□□□□ 0.14
CPNE1-222ENST00000473373 AMPHP49418 695 aa15.94■□□□□ 0.14
CPNE1-222ENST00000473373 LTV1Q96GA3 475 aaPredicted RBP15.94■□□□□ 0.14
CPNE1-222ENST00000473373 GGNBP2Q9H3C7 697 aa15.94■□□□□ 0.14
CPNE1-222ENST00000473373 NLRP2Q9NX02 1062 aa15.94■□□□□ 0.14
CPNE1-222ENST00000473373 FAM208AQ9UK61 1670 aaKnown RBP15.94■□□□□ 0.14
CPNE1-222ENST00000473373 LRRC37A3O60309 1634 aa15.94■□□□□ 0.14
CPNE1-222ENST00000473373 DDB1Q16531 1140 aa15.93■□□□□ 0.14
CPNE1-222ENST00000473373 NSD3Q9BZ95 1437 aa15.92■□□□□ 0.14
CPNE1-222ENST00000473373 CCDC7Q96M83 1385 aa15.91■□□□□ 0.14
CPNE1-222ENST00000473373 RGPD2P0DJD1 1756 aa15.91■□□□□ 0.14
CPNE1-222ENST00000473373 ANKRD24Q8TF21 1146 aa15.91■□□□□ 0.14
CPNE1-222ENST00000473373 CARD10Q9BWT7 1032 aa15.91■□□□□ 0.14
CPNE1-222ENST00000473373 MAP2P11137 1827 aaKnown RBP15.91■□□□□ 0.14
CPNE1-222ENST00000473373 SBF2Q86WG5 1849 aa15.9■□□□□ 0.14
CPNE1-222ENST00000473373 CDCA7Q9BWT1 371 aaPredicted RBP15.9■□□□□ 0.14
CPNE1-222ENST00000473373 NBPF14Q5TI25 921 aa15.89■□□□□ 0.13
CPNE1-222ENST00000473373 ERBB3P21860 1342 aa15.89■□□□□ 0.13
CPNE1-222ENST00000473373 ANKRD26Q9UPS8 1709 aa15.88■□□□□ 0.13
CPNE1-222ENST00000473373 OVOS2A0A0G2JMS6 1433 aa15.88■□□□□ 0.13
CPNE1-222ENST00000473373 SMG6Q86US8 1419 aaKnown RBP15.88■□□□□ 0.13
CPNE1-222ENST00000473373 FYB1O15117 783 aa15.88■□□□□ 0.13
CPNE1-222ENST00000473373 CGNL1Q0VF96 1302 aa15.88■□□□□ 0.13
CPNE1-222ENST00000473373 PARD3Q8TEW0 1356 aa15.87■□□□□ 0.13
CPNE1-222ENST00000473373 C11orf95C9JLR9 678 aaPredicted RBP15.87■□□□□ 0.13
CPNE1-222ENST00000473373 EXOC5O00471 708 aa15.87■□□□□ 0.13
CPNE1-222ENST00000473373 RRS1Q15050 365 aaKnown RBP15.87■□□□□ 0.13
CPNE1-222ENST00000473373 IP6K1Q92551 441 aa15.87■□□□□ 0.13
CPNE1-222ENST00000473373 MAP3K19Q56UN5 1328 aa15.87■□□□□ 0.13
CPNE1-222ENST00000473373 PPM1GO15355 546 aaPredicted RBP15.86■□□□□ 0.13
CPNE1-222ENST00000473373 FBLN1P23142 703 aa15.86■□□□□ 0.13
CPNE1-222ENST00000473373 YY1P25490 414 aa15.85■□□□□ 0.13
CPNE1-222ENST00000473373 HOXC9P31274 260 aa15.85■□□□□ 0.13
CPNE1-222ENST00000473373 PPP1R1BQ9UD71 204 aaPredicted RBP15.85■□□□□ 0.13
CPNE1-222ENST00000473373 IL2RBP14784 551 aa15.84■□□□□ 0.13
CPNE1-222ENST00000473373 RTL1A6NKG5 1358 aa15.84■□□□□ 0.13
CPNE1-222ENST00000473373 CARD14Q9BXL6 1004 aa15.83■□□□□ 0.12
CPNE1-222ENST00000473373 TNNT2P45379 298 aaPredicted RBP15.82■□□□□ 0.12
CPNE1-222ENST00000473373 PIAS4Q8N2W9 510 aaPredicted RBP15.82■□□□□ 0.12
CPNE1-222ENST00000473373 SPON1Q9HCB6 807 aa15.82■□□□□ 0.12
CPNE1-222ENST00000473373 TNS2Q63HR2 1409 aa15.82■□□□□ 0.12
CPNE1-222ENST00000473373 RREB1Q92766 1687 aa15.82■□□□□ 0.12
CPNE1-222ENST00000473373 NUP188Q5SRE5 1749 aa15.82■□□□□ 0.12
CPNE1-222ENST00000473373 PEAK1Q9H792 1746 aa15.82■□□□□ 0.12
CPNE1-222ENST00000473373 KCNQ2O43526 872 aa15.81■□□□□ 0.12
CPNE1-222ENST00000473373 PANK3Q9H999 370 aa15.81■□□□□ 0.12
CPNE1-222ENST00000473373 FLT4P35916 1363 aa15.8■□□□□ 0.12
CPNE1-222ENST00000473373 KNSTRNQ9Y448 316 aa15.8■□□□□ 0.12
CPNE1-222ENST00000473373 MARCH10Q8NA82 808 aaPredicted RBP15.79■□□□□ 0.12
CPNE1-222ENST00000473373 DCAF8L1A6NGE4 600 aa15.78■□□□□ 0.12
CPNE1-222ENST00000473373 PTF1AQ7RTS3 328 aa15.78■□□□□ 0.12
CPNE1-222ENST00000473373 DDX54Q8TDD1 881 aaKnown RBP15.78■□□□□ 0.12
CPNE1-222ENST00000473373 USHBP1Q8N6Y0 703 aa15.77■□□□□ 0.12
CPNE1-222ENST00000473373 RAPGEF4Q8WZA2 1011 aa15.77■□□□□ 0.12
CPNE1-222ENST00000473373 ACSBG1Q96GR2 724 aa15.77■□□□□ 0.12
CPNE1-222ENST00000473373 EMILIN1Q9Y6C2 1016 aa15.77■□□□□ 0.12
CPNE1-222ENST00000473373 NHSQ6T4R5 1651 aa15.76■□□□□ 0.11
CPNE1-222ENST00000473373 HSP90AB2PQ58FF8 381 aa15.76■□□□□ 0.11
CPNE1-222ENST00000473373 RGPD3A6NKT7 1758 aaPredicted RBP15.76■□□□□ 0.11
CPNE1-222ENST00000473373 RGPD4Q7Z3J3 1758 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms