RNA–Protein interactions for RNA: ENST00000473182.2

RAPGEF4-210, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 4

Gene RAPGEF4, Length 599 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-210ENST00000473182 SOX12O15370 315 aa11.31□□□□□ -0.6
RAPGEF4-210ENST00000473182 CACNB1Q02641 598 aaPredicted RBP11.31□□□□□ -0.6
RAPGEF4-210ENST00000473182 NBPF1Q3BBV0 1214 aa11.31□□□□□ -0.6
RAPGEF4-210ENST00000473182 MARCH10Q8NA82 808 aaPredicted RBP11.31□□□□□ -0.6
RAPGEF4-210ENST00000473182 CABP1Q9NZU7 370 aa11.31□□□□□ -0.6
RAPGEF4-210ENST00000473182 RGPD3A6NKT7 1758 aaPredicted RBP11.31□□□□□ -0.6
RAPGEF4-210ENST00000473182 RGPD4Q7Z3J3 1758 aa11.31□□□□□ -0.6
RAPGEF4-210ENST00000473182 PROM2Q8N271 834 aa11.3□□□□□ -0.6
RAPGEF4-210ENST00000473182 ZNF784Q8NCA9 323 aaPredicted RBP11.3□□□□□ -0.6
RAPGEF4-210ENST00000473182 CDCA7Q9BWT1 371 aaPredicted RBP11.3□□□□□ -0.6
RAPGEF4-210ENST00000473182 AXIN2Q9Y2T1 843 aa11.3□□□□□ -0.6
RAPGEF4-210ENST00000473182 WDR17Q8IZU2 1322 aa11.3□□□□□ -0.6
RAPGEF4-210ENST00000473182 SBF2Q86WG5 1849 aa11.3□□□□□ -0.6
RAPGEF4-210ENST00000473182 MYOM1P52179 1685 aa11.3□□□□□ -0.6
RAPGEF4-210ENST00000473182 BRD4O60885 1362 aaPredicted RBP11.29□□□□□ -0.6
RAPGEF4-210ENST00000473182 CASZ1Q86V15 1759 aa11.29□□□□□ -0.6
RAPGEF4-210ENST00000473182 USP6P35125 1406 aa11.29□□□□□ -0.6
RAPGEF4-210ENST00000473182 PTGER2P43116 358 aa11.29□□□□□ -0.6
RAPGEF4-210ENST00000473182 SLC15A2Q16348 729 aa11.29□□□□□ -0.6
RAPGEF4-210ENST00000473182 TXNRD1Q16881 649 aa11.29□□□□□ -0.6
RAPGEF4-210ENST00000473182 FHDC1Q9C0D6 1143 aaPredicted RBP11.29□□□□□ -0.6
RAPGEF4-210ENST00000473182 EXOC5O00471 708 aa11.28□□□□□ -0.6
RAPGEF4-210ENST00000473182 SYT17Q9BSW7 474 aa11.28□□□□□ -0.6
RAPGEF4-210ENST00000473182 SLIT3O75094 1523 aa11.28□□□□□ -0.6
RAPGEF4-210ENST00000473182 KIAA1210Q9ULL0 1709 aa11.27□□□□□ -0.61
RAPGEF4-210ENST00000473182 AKAP12Q02952 1782 aa11.27□□□□□ -0.61
RAPGEF4-210ENST00000473182 SENP3-EIF4A1A0A087X0R7 540 aa11.27□□□□□ -0.61
RAPGEF4-210ENST00000473182 CPSF1Q10570 1443 aaKnown RBP11.26□□□□□ -0.61
RAPGEF4-210ENST00000473182 KCNH5Q8NCM2 988 aa11.26□□□□□ -0.61
RAPGEF4-210ENST00000473182 ACSBG1Q96GR2 724 aa11.26□□□□□ -0.61
RAPGEF4-210ENST00000473182 CARD10Q9BWT7 1032 aa11.26□□□□□ -0.61
RAPGEF4-210ENST00000473182 MTFR1LQ9H019 292 aa11.26□□□□□ -0.61
RAPGEF4-210ENST00000473182 WNK3Q9BYP7 1800 aa11.25□□□□□ -0.61
RAPGEF4-210ENST00000473182 PIK3C2AO00443 1686 aa11.25□□□□□ -0.61
RAPGEF4-210ENST00000473182 QRICH2Q9H0J4 1663 aa11.25□□□□□ -0.61
RAPGEF4-210ENST00000473182 ARHGEF25Q86VW2 580 aa11.25□□□□□ -0.61
RAPGEF4-210ENST00000473182 BCL9O00512 1426 aa11.25□□□□□ -0.61
RAPGEF4-210ENST00000473182 COL18A1P39060 1754 aa11.24□□□□□ -0.61
RAPGEF4-210ENST00000473182 KLHL34Q8N239 644 aa11.24□□□□□ -0.61
RAPGEF4-210ENST00000473182 ARXQ96QS3 562 aa11.24□□□□□ -0.61
RAPGEF4-210ENST00000473182 TTC21BQ7Z4L5 1316 aa11.24□□□□□ -0.61
RAPGEF4-210ENST00000473182 EVC2Q86UK5 1308 aa11.24□□□□□ -0.61
RAPGEF4-210ENST00000473182 GPR162Q16538 588 aa11.23□□□□□ -0.61
RAPGEF4-210ENST00000473182 CCDC7Q96M83 1385 aa11.23□□□□□ -0.61
RAPGEF4-210ENST00000473182 C1QTNF8P60827 252 aa11.22□□□□□ -0.61
RAPGEF4-210ENST00000473182 TNS2Q63HR2 1409 aa11.22□□□□□ -0.61
RAPGEF4-210ENST00000473182 PELP1Q8IZL8 1130 aaKnown RBP11.22□□□□□ -0.61
RAPGEF4-210ENST00000473182 RGPD5Q99666 1765 aa11.22□□□□□ -0.61
RAPGEF4-210ENST00000473182 ZNF692Q9BU19 519 aaPredicted RBP11.22□□□□□ -0.61
RAPGEF4-210ENST00000473182 SGIP1Q9BQI5 828 aa11.21□□□□□ -0.61
RAPGEF4-210ENST00000473182 NLRP2Q9NX02 1062 aa11.21□□□□□ -0.61
RAPGEF4-210ENST00000473182 KTN1Q86UP2 1357 aaKnown RBP11.2□□□□□ -0.62
RAPGEF4-210ENST00000473182 TTC21AQ8NDW8 1320 aa11.2□□□□□ -0.62
RAPGEF4-210ENST00000473182 UTRNP46939 3433 aa11.19□□□□□ -0.62
RAPGEF4-210ENST00000473182 CHD4Q14839 1912 aa11.19□□□□□ -0.62
RAPGEF4-210ENST00000473182 ZNF827Q17R98 1081 aa11.19□□□□□ -0.62
RAPGEF4-210ENST00000473182 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.19□□□□□ -0.62
RAPGEF4-210ENST00000473182 NHSQ6T4R5 1651 aa11.19□□□□□ -0.62
RAPGEF4-210ENST00000473182 TRPM1Q7Z4N2 1603 aa11.19□□□□□ -0.62
RAPGEF4-210ENST00000473182 GIGYF1O75420 1035 aaPredicted RBP11.18□□□□□ -0.62
RAPGEF4-210ENST00000473182 IL2RBP14784 551 aa11.18□□□□□ -0.62
RAPGEF4-210ENST00000473182 POLD1P28340 1107 aa11.18□□□□□ -0.62
RAPGEF4-210ENST00000473182 NFAT5O94916 1531 aa11.18□□□□□ -0.62
RAPGEF4-210ENST00000473182 ERBB3P21860 1342 aa11.17□□□□□ -0.62
RAPGEF4-210ENST00000473182 ABCC6O95255 1503 aa11.17□□□□□ -0.62
RAPGEF4-210ENST00000473182 KAT6BQ8WYB5 2073 aa11.16□□□□□ -0.62
RAPGEF4-210ENST00000473182 MAP3K5Q99683 1374 aa11.16□□□□□ -0.62
RAPGEF4-210ENST00000473182 DDX54Q8TDD1 881 aaKnown RBP11.16□□□□□ -0.62
RAPGEF4-210ENST00000473182 ANKRD24Q8TF21 1146 aa11.16□□□□□ -0.62
RAPGEF4-210ENST00000473182 L3MBTL2Q969R5 705 aa11.16□□□□□ -0.62
RAPGEF4-210ENST00000473182 LRRC4BQ9NT99 713 aa11.16□□□□□ -0.62
RAPGEF4-210ENST00000473182 TFCP2L1Q9NZI6 479 aa11.16□□□□□ -0.62
RAPGEF4-210ENST00000473182 PAPPAQ13219 1627 aa11.16□□□□□ -0.62
RAPGEF4-210ENST00000473182 ROCK2O75116 1388 aaKnown RBP11.16□□□□□ -0.62
RAPGEF4-210ENST00000473182 BTAF1O14981 1849 aa11.15□□□□□ -0.62
RAPGEF4-210ENST00000473182 NME9Q86XW9 330 aa11.15□□□□□ -0.62
RAPGEF4-210ENST00000473182 TMC1Q8TDI8 760 aa11.15□□□□□ -0.62
RAPGEF4-210ENST00000473182 SYTL4Q96C24 671 aaPredicted RBP11.15□□□□□ -0.62
RAPGEF4-210ENST00000473182 SLC16A10Q8TF71 515 aa11.14□□□□□ -0.63
RAPGEF4-210ENST00000473182 AKT1S1Q96B36 256 aa11.14□□□□□ -0.63
RAPGEF4-210ENST00000473182 KCNQ4P56696 695 aa11.13□□□□□ -0.63
RAPGEF4-210ENST00000473182 SLC27A3Q5K4L6 730 aa11.13□□□□□ -0.63
RAPGEF4-210ENST00000473182 LTV1Q96GA3 475 aaPredicted RBP11.13□□□□□ -0.63
RAPGEF4-210ENST00000473182 USP31Q70CQ4 1352 aa11.13□□□□□ -0.63
RAPGEF4-210ENST00000473182 PNPLA7Q6ZV29 1317 aa11.12□□□□□ -0.63
RAPGEF4-210ENST00000473182 HDGFL2Q7Z4V5 671 aaPredicted RBP11.12□□□□□ -0.63
RAPGEF4-210ENST00000473182 NLGN2Q8NFZ4 835 aa11.12□□□□□ -0.63
RAPGEF4-210ENST00000473182 LTN1O94822 1766 aa11.11□□□□□ -0.63
RAPGEF4-210ENST00000473182 NEUROD1Q13562 356 aa11.11□□□□□ -0.63
RAPGEF4-210ENST00000473182 MON2Q7Z3U7 1717 aa11.11□□□□□ -0.63
RAPGEF4-210ENST00000473182 GRIN3BO60391 1043 aa11.1□□□□□ -0.63
RAPGEF4-210ENST00000473182 PRIM1P49642 420 aaKnown RBP11.1□□□□□ -0.63
RAPGEF4-210ENST00000473182 IFFO2Q5TF58 517 aa11.1□□□□□ -0.63
RAPGEF4-210ENST00000473182 SIN3AQ96ST3 1273 aa11.1□□□□□ -0.63
RAPGEF4-210ENST00000473182 SBNO2Q9Y2G9 1366 aa11.09□□□□□ -0.63
RAPGEF4-210ENST00000473182 CCNL1Q9UK58 526 aaPredicted RBP11.09□□□□□ -0.63
RAPGEF4-210ENST00000473182 YBX3P16989 372 aaKnown RBP eCLIP11.08□□□□□ -0.64
RAPGEF4-210ENST00000473182 MSL1Q68DK7 614 aa11.08□□□□□ -0.64
RAPGEF4-210ENST00000473182 IP6K1Q92551 441 aa11.08□□□□□ -0.64
RAPGEF4-210ENST00000473182 SLC12A5Q9H2X9 1139 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms