RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 CSB-PGBD3P0DP91 1061 aa14.38□□□□□ -0.11
SMARCD3-208ENST00000472789 TNNT2P45379 298 aaPredicted RBP14.38□□□□□ -0.11
SMARCD3-208ENST00000472789 NFAT5O94916 1531 aa14.37□□□□□ -0.11
SMARCD3-208ENST00000472789 AMPHP49418 695 aa14.37□□□□□ -0.11
SMARCD3-208ENST00000472789 RRS1Q15050 365 aaKnown RBP14.37□□□□□ -0.11
SMARCD3-208ENST00000472789 GLI3P10071 1580 aa14.37□□□□□ -0.11
SMARCD3-208ENST00000472789 AATKQ6ZMQ8 1374 aa14.36□□□□□ -0.11
SMARCD3-208ENST00000472789 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.36□□□□□ -0.11
SMARCD3-208ENST00000472789 A0A0G2JS52 829 aa14.36□□□□□ -0.11
SMARCD3-208ENST00000472789 PPM1GO15355 546 aaPredicted RBP14.36□□□□□ -0.11
SMARCD3-208ENST00000472789 ANP32CO43423 234 aa14.36□□□□□ -0.11
SMARCD3-208ENST00000472789 MYT1Q01538 1121 aa14.36□□□□□ -0.11
SMARCD3-208ENST00000472789 VPS72Q15906 364 aa14.36□□□□□ -0.11
SMARCD3-208ENST00000472789 CC2D1BQ5T0F9 858 aaKnown RBP14.36□□□□□ -0.11
SMARCD3-208ENST00000472789 MORC1Q86VD1 984 aa14.36□□□□□ -0.11
SMARCD3-208ENST00000472789 USP35Q9P2H5 1018 aa14.36□□□□□ -0.11
SMARCD3-208ENST00000472789 USP54Q70EL1 1684 aa14.36□□□□□ -0.11
SMARCD3-208ENST00000472789 NWD2Q9ULI1 1742 aa14.35□□□□□ -0.11
SMARCD3-208ENST00000472789 AXIN2Q9Y2T1 843 aa14.35□□□□□ -0.11
SMARCD3-208ENST00000472789 MAP3K19Q56UN5 1328 aa14.35□□□□□ -0.11
SMARCD3-208ENST00000472789 CAMTA1Q9Y6Y1 1673 aa14.34□□□□□ -0.11
SMARCD3-208ENST00000472789 LARP1Q6PKG0 1096 aaKnown RBP14.34□□□□□ -0.11
SMARCD3-208ENST00000472789 LTV1Q96GA3 475 aaPredicted RBP14.34□□□□□ -0.11
SMARCD3-208ENST00000472789 BRWD3Q6RI45 1802 aa14.34□□□□□ -0.11
SMARCD3-208ENST00000472789 NSD2O96028 1365 aa14.34□□□□□ -0.11
SMARCD3-208ENST00000472789 BLMP54132 1417 aaPredicted RBP14.33□□□□□ -0.11
SMARCD3-208ENST00000472789 TOM1L2Q6ZVM7 507 aa14.33□□□□□ -0.12
SMARCD3-208ENST00000472789 DEFB132Q7Z7B7 95 aa14.33□□□□□ -0.12
SMARCD3-208ENST00000472789 PER1O15534 1290 aaPredicted RBP14.32□□□□□ -0.12
SMARCD3-208ENST00000472789 AMER1Q5JTC6 1135 aaPredicted RBP14.32□□□□□ -0.12
SMARCD3-208ENST00000472789 NRAPQ86VF7 1730 aa14.32□□□□□ -0.12
SMARCD3-208ENST00000472789 LTN1O94822 1766 aa14.32□□□□□ -0.12
SMARCD3-208ENST00000472789 COL5A2P05997 1499 aaPredicted RBP14.31□□□□□ -0.12
SMARCD3-208ENST00000472789 LMO7Q8WWI1 1683 aa14.31□□□□□ -0.12
SMARCD3-208ENST00000472789 HOXC9P31274 260 aa14.31□□□□□ -0.12
SMARCD3-208ENST00000472789 FAM98CQ17RN3 349 aaKnown RBP14.31□□□□□ -0.12
SMARCD3-208ENST00000472789 ANKRD24Q8TF21 1146 aa14.31□□□□□ -0.12
SMARCD3-208ENST00000472789 IP6K1Q92551 441 aa14.31□□□□□ -0.12
SMARCD3-208ENST00000472789 NLRP2Q9NX02 1062 aa14.31□□□□□ -0.12
SMARCD3-208ENST00000472789 EMILIN1Q9Y6C2 1016 aa14.31□□□□□ -0.12
SMARCD3-208ENST00000472789 SPATA31A5Q5VU36 1347 aa14.31□□□□□ -0.12
SMARCD3-208ENST00000472789 SPATA31A7Q8IWB4 1347 aa14.31□□□□□ -0.12
SMARCD3-208ENST00000472789 SPATA31A1Q5TZJ5 1347 aa14.3□□□□□ -0.12
SMARCD3-208ENST00000472789 SEPT12Q8IYM1 358 aa14.29□□□□□ -0.12
SMARCD3-208ENST00000472789 TCP11L2Q8N4U5 519 aa14.29□□□□□ -0.12
SMARCD3-208ENST00000472789 WDR17Q8IZU2 1322 aa14.29□□□□□ -0.12
SMARCD3-208ENST00000472789 ANKRD26Q9UPS8 1709 aa14.29□□□□□ -0.12
SMARCD3-208ENST00000472789 COL18A1P39060 1754 aa14.29□□□□□ -0.12
SMARCD3-208ENST00000472789 RTL1A6NKG5 1358 aa14.28□□□□□ -0.12
SMARCD3-208ENST00000472789 ERBB3P21860 1342 aa14.28□□□□□ -0.12
SMARCD3-208ENST00000472789 CRB1P82279 1406 aa14.28□□□□□ -0.12
SMARCD3-208ENST00000472789 RGPD5Q99666 1765 aa14.27□□□□□ -0.12
SMARCD3-208ENST00000472789 ABCC6O95255 1503 aa14.27□□□□□ -0.12
SMARCD3-208ENST00000472789 FLT4P35916 1363 aa14.27□□□□□ -0.12
SMARCD3-208ENST00000472789 ONECUT3O60422 494 aaPredicted RBP14.27□□□□□ -0.13
SMARCD3-208ENST00000472789 HSP90AB2PQ58FF8 381 aa14.27□□□□□ -0.13
SMARCD3-208ENST00000472789 POLKQ9UBT6 870 aa14.27□□□□□ -0.13
SMARCD3-208ENST00000472789 SMG6Q86US8 1419 aaKnown RBP14.26□□□□□ -0.13
SMARCD3-208ENST00000472789 MIER1Q8N108 512 aa14.26□□□□□ -0.13
SMARCD3-208ENST00000472789 LRP5O75197 1615 aa14.26□□□□□ -0.13
SMARCD3-208ENST00000472789 NPC1L1Q9UHC9 1359 aa14.25□□□□□ -0.13
SMARCD3-208ENST00000472789 CARD10Q9BWT7 1032 aa14.25□□□□□ -0.13
SMARCD3-208ENST00000472789 KIF24Q5T7B8 1368 aa14.24□□□□□ -0.13
SMARCD3-208ENST00000472789 THRAP3Q9Y2W1 955 aaKnown RBP14.24□□□□□ -0.13
SMARCD3-208ENST00000472789 MAP2P11137 1827 aaKnown RBP14.24□□□□□ -0.13
SMARCD3-208ENST00000472789 INSRP06213 1382 aa14.23□□□□□ -0.13
SMARCD3-208ENST00000472789 SF3B2Q13435 895 aaKnown RBP14.23□□□□□ -0.13
SMARCD3-208ENST00000472789 RALBP1Q15311 655 aa14.23□□□□□ -0.13
SMARCD3-208ENST00000472789 BARGINQ6ZT62 677 aa14.23□□□□□ -0.13
SMARCD3-208ENST00000472789 KRT27Q7Z3Y8 459 aa14.23□□□□□ -0.13
SMARCD3-208ENST00000472789 PEAK1Q9H792 1746 aa14.23□□□□□ -0.13
SMARCD3-208ENST00000472789 CCER2I3L3R5 266 aa14.22□□□□□ -0.13
SMARCD3-208ENST00000472789 MTHFSP49914 203 aa14.22□□□□□ -0.13
SMARCD3-208ENST00000472789 USHBP1Q8N6Y0 703 aa14.22□□□□□ -0.13
SMARCD3-208ENST00000472789 PSDA5PKW4 1024 aaPredicted RBP14.21□□□□□ -0.13
SMARCD3-208ENST00000472789 PDE3BQ13370 1112 aa14.21□□□□□ -0.13
SMARCD3-208ENST00000472789 PRKRIP1Q9H875 184 aaPredicted RBP14.21□□□□□ -0.13
SMARCD3-208ENST00000472789 NBPF6Q5VWK0 638 aa14.2□□□□□ -0.14
SMARCD3-208ENST00000472789 NBPF4Q96M43 638 aa14.2□□□□□ -0.14
SMARCD3-208ENST00000472789 IL2RBP14784 551 aa14.19□□□□□ -0.14
SMARCD3-208ENST00000472789 EIF4A2Q14240 407 aaKnown RBP14.19□□□□□ -0.14
SMARCD3-208ENST00000472789 DDB1Q16531 1140 aa14.19□□□□□ -0.14
SMARCD3-208ENST00000472789 CDCA7Q9BWT1 371 aaPredicted RBP14.19□□□□□ -0.14
SMARCD3-208ENST00000472789 FAM182BQ5T319 152 aa14.18□□□□□ -0.14
SMARCD3-208ENST00000472789 EXOC5O00471 708 aa14.17□□□□□ -0.14
SMARCD3-208ENST00000472789 PPP2R1AP30153 589 aa14.17□□□□□ -0.14
SMARCD3-208ENST00000472789 BAG6P46379 1132 aa14.17□□□□□ -0.14
SMARCD3-208ENST00000472789 RAPGEF4Q8WZA2 1011 aa14.17□□□□□ -0.14
SMARCD3-208ENST00000472789 CFAP53Q96M91 514 aa14.17□□□□□ -0.14
SMARCD3-208ENST00000472789 EYA1Q99502 592 aa14.17□□□□□ -0.14
SMARCD3-208ENST00000472789 FAM208AQ9UK61 1670 aaKnown RBP14.17□□□□□ -0.14
SMARCD3-208ENST00000472789 THSD7AQ9UPZ6 1657 aa14.17□□□□□ -0.14
SMARCD3-208ENST00000472789 RGPD2P0DJD1 1756 aa14.16□□□□□ -0.14
SMARCD3-208ENST00000472789 DIAPH1O60610 1272 aaKnown RBP14.15□□□□□ -0.14
SMARCD3-208ENST00000472789 TATP17735 454 aaPredicted RBP14.15□□□□□ -0.14
SMARCD3-208ENST00000472789 EN1Q05925 392 aaPredicted RBP14.15□□□□□ -0.14
SMARCD3-208ENST00000472789 PARD3Q8TEW0 1356 aa14.14□□□□□ -0.15
SMARCD3-208ENST00000472789 DISP2A7MBM2 1401 aa14.14□□□□□ -0.15
SMARCD3-208ENST00000472789 MYBBP1AQ9BQG0 1328 aaKnown RBP14.14□□□□□ -0.15
SMARCD3-208ENST00000472789 U2SURPO15042 1029 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms