RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 C8orf37Q96NL8 207 aa14.1□□□□□ -0.15
UBE2F-220ENST00000472479 U2SURPO15042 1029 aaKnown RBP14.09□□□□□ -0.15
UBE2F-220ENST00000472479 DIAPH1O60610 1272 aaKnown RBP14.09□□□□□ -0.15
UBE2F-220ENST00000472479 WDR43Q15061 677 aaKnown RBP eCLIP14.09□□□□□ -0.15
UBE2F-220ENST00000472479 HSP90AB2PQ58FF8 381 aa14.09□□□□□ -0.15
UBE2F-220ENST00000472479 IP6K1Q92551 441 aa14.09□□□□□ -0.15
UBE2F-220ENST00000472479 FAM83GA6ND36 823 aa14.08□□□□□ -0.16
UBE2F-220ENST00000472479 CCER2I3L3R5 266 aa14.08□□□□□ -0.16
UBE2F-220ENST00000472479 HOXC9P31274 260 aa14.08□□□□□ -0.16
UBE2F-220ENST00000472479 STRN4Q9NRL3 753 aa14.08□□□□□ -0.16
UBE2F-220ENST00000472479 MED1Q15648 1581 aaPredicted RBP14.08□□□□□ -0.16
UBE2F-220ENST00000472479 ANKRD26Q9UPS8 1709 aa14.08□□□□□ -0.16
UBE2F-220ENST00000472479 FLT4P35916 1363 aa14.08□□□□□ -0.16
UBE2F-220ENST00000472479 SLIT3O75094 1523 aa14.07□□□□□ -0.16
UBE2F-220ENST00000472479 ANKRD24Q8TF21 1146 aa14.06□□□□□ -0.16
UBE2F-220ENST00000472479 BTG4Q9NY30 223 aa14.06□□□□□ -0.16
UBE2F-220ENST00000472479 CCDC9Q9Y3X0 531 aaKnown RBP14.06□□□□□ -0.16
UBE2F-220ENST00000472479 FAM9BQ8IZU0 186 aa14.06□□□□□ -0.16
UBE2F-220ENST00000472479 RNF39Q9H2S5 420 aa14.06□□□□□ -0.16
UBE2F-220ENST00000472479 SMG6Q86US8 1419 aaKnown RBP14.05□□□□□ -0.16
UBE2F-220ENST00000472479 CPDO75976 1380 aa14.05□□□□□ -0.16
UBE2F-220ENST00000472479 U2AF1L5P0DN76 240 aaPredicted RBP14.05□□□□□ -0.16
UBE2F-220ENST00000472479 U2AF1Q01081 240 aaKnown RBP eCLIP14.05□□□□□ -0.16
UBE2F-220ENST00000472479 TOM1L2Q6ZVM7 507 aa14.05□□□□□ -0.16
UBE2F-220ENST00000472479 NLRP2Q9NX02 1062 aa14.05□□□□□ -0.16
UBE2F-220ENST00000472479 KIF24Q5T7B8 1368 aa14.04□□□□□ -0.16
UBE2F-220ENST00000472479 CCDC184Q52MB2 194 aa14.04□□□□□ -0.16
UBE2F-220ENST00000472479 AXIN2Q9Y2T1 843 aa14.04□□□□□ -0.16
UBE2F-220ENST00000472479 RTL1A6NKG5 1358 aa14.04□□□□□ -0.16
UBE2F-220ENST00000472479 SHPRHQ149N8 1683 aa14.03□□□□□ -0.16
UBE2F-220ENST00000472479 PHRF1Q9P1Y6 1649 aaKnown RBP14.03□□□□□ -0.16
UBE2F-220ENST00000472479 NEFMP07197 916 aa14.03□□□□□ -0.16
UBE2F-220ENST00000472479 EIF4A2Q14240 407 aaKnown RBP14.03□□□□□ -0.16
UBE2F-220ENST00000472479 NFAT5O94916 1531 aa14.03□□□□□ -0.16
UBE2F-220ENST00000472479 INSRP06213 1382 aa14.03□□□□□ -0.16
UBE2F-220ENST00000472479 COL22A1Q8NFW1 1626 aaPredicted RBP14.03□□□□□ -0.16
UBE2F-220ENST00000472479 MAP2P11137 1827 aaKnown RBP14.02□□□□□ -0.16
UBE2F-220ENST00000472479 USP54Q70EL1 1684 aa14.02□□□□□ -0.17
UBE2F-220ENST00000472479 USP35Q9P2H5 1018 aa14.01□□□□□ -0.17
UBE2F-220ENST00000472479 USP21Q9UK80 565 aa14.01□□□□□ -0.17
UBE2F-220ENST00000472479 BLMP54132 1417 aaPredicted RBP14.01□□□□□ -0.17
UBE2F-220ENST00000472479 HMOX1P09601 288 aa14□□□□□ -0.17
UBE2F-220ENST00000472479 IL13P35225 146 aa14□□□□□ -0.17
UBE2F-220ENST00000472479 PNNQ9H307 717 aaKnown RBP14□□□□□ -0.17
UBE2F-220ENST00000472479 CDK12Q9NYV4 1490 aaPredicted RBP14□□□□□ -0.17
UBE2F-220ENST00000472479 MARF1Q9Y4F3 1742 aaKnown RBP14□□□□□ -0.17
UBE2F-220ENST00000472479 SULT6B1Q6IMI4 303 aa13.99□□□□□ -0.17
UBE2F-220ENST00000472479 UNC5CLQ8IV45 518 aa13.99□□□□□ -0.17
UBE2F-220ENST00000472479 AFF2P51816 1311 aa13.99□□□□□ -0.17
UBE2F-220ENST00000472479 LARP1Q6PKG0 1096 aaKnown RBP13.99□□□□□ -0.17
UBE2F-220ENST00000472479 USHBP1Q8N6Y0 703 aa13.99□□□□□ -0.17
UBE2F-220ENST00000472479 EYA1Q99502 592 aa13.99□□□□□ -0.17
UBE2F-220ENST00000472479 LTN1O94822 1766 aa13.98□□□□□ -0.17
UBE2F-220ENST00000472479 ERBB3P21860 1342 aa13.98□□□□□ -0.17
UBE2F-220ENST00000472479 PNISRQ8TF01 805 aaKnown RBP13.98□□□□□ -0.17
UBE2F-220ENST00000472479 ADAMTS8Q9UP79 889 aa13.98□□□□□ -0.17
UBE2F-220ENST00000472479 WDR17Q8IZU2 1322 aa13.97□□□□□ -0.17
UBE2F-220ENST00000472479 A0A0G2JS52 829 aa13.97□□□□□ -0.17
UBE2F-220ENST00000472479 MYT1Q01538 1121 aa13.97□□□□□ -0.17
UBE2F-220ENST00000472479 NBPF6Q5VWK0 638 aa13.97□□□□□ -0.17
UBE2F-220ENST00000472479 NBPF4Q96M43 638 aa13.97□□□□□ -0.17
UBE2F-220ENST00000472479 ABCA3Q99758 1704 aa13.97□□□□□ -0.17
UBE2F-220ENST00000472479 LRP6O75581 1613 aa13.96□□□□□ -0.17
UBE2F-220ENST00000472479 FNBP4Q8N3X1 1017 aaPredicted RBP13.96□□□□□ -0.17
UBE2F-220ENST00000472479 RAPGEF4Q8WZA2 1011 aa13.96□□□□□ -0.17
UBE2F-220ENST00000472479 CRYBG1Q9Y4K1 1723 aa13.96□□□□□ -0.17
UBE2F-220ENST00000472479 COL14A1Q05707 1796 aaKnown RBP13.96□□□□□ -0.17
UBE2F-220ENST00000472479 MAPK8IP3Q9UPT6 1336 aa13.96□□□□□ -0.18
UBE2F-220ENST00000472479 ZNF772Q68DY9 489 aaPredicted RBP13.95□□□□□ -0.18
UBE2F-220ENST00000472479 CCDC146Q8IYE0 955 aa13.95□□□□□ -0.18
UBE2F-220ENST00000472479 CARD10Q9BWT7 1032 aa13.95□□□□□ -0.18
UBE2F-220ENST00000472479 CAMTA1Q9Y6Y1 1673 aa13.95□□□□□ -0.18
UBE2F-220ENST00000472479 PEAK1Q9H792 1746 aa13.95□□□□□ -0.18
UBE2F-220ENST00000472479 FCHSD2O94868 740 aa13.94□□□□□ -0.18
UBE2F-220ENST00000472479 TATP17735 454 aaPredicted RBP13.94□□□□□ -0.18
UBE2F-220ENST00000472479 QTRT2Q9H974 415 aaKnown RBP13.94□□□□□ -0.18
UBE2F-220ENST00000472479 TRPC5Q9UL62 973 aaPredicted RBP13.94□□□□□ -0.18
UBE2F-220ENST00000472479 COL5A2P05997 1499 aaPredicted RBP13.94□□□□□ -0.18
UBE2F-220ENST00000472479 PRKAR2BP31323 418 aa13.93□□□□□ -0.18
UBE2F-220ENST00000472479 AEBP1Q8IUX7 1158 aa13.93□□□□□ -0.18
UBE2F-220ENST00000472479 VPS72Q15906 364 aa13.93□□□□□ -0.18
UBE2F-220ENST00000472479 TCP11L2Q8N4U5 519 aa13.93□□□□□ -0.18
UBE2F-220ENST00000472479 CRB1P82279 1406 aa13.92□□□□□ -0.18
UBE2F-220ENST00000472479 ABCC6O95255 1503 aa13.92□□□□□ -0.18
UBE2F-220ENST00000472479 CACNB1Q02641 598 aaPredicted RBP13.92□□□□□ -0.18
UBE2F-220ENST00000472479 RUNDC1Q96C34 613 aa13.92□□□□□ -0.18
UBE2F-220ENST00000472479 IGSF1Q8N6C5 1336 aa13.92□□□□□ -0.18
UBE2F-220ENST00000472479 COL3A1P02461 1466 aaPredicted RBP13.91□□□□□ -0.18
UBE2F-220ENST00000472479 SENP3-EIF4A1A0A087X0R7 540 aa13.91□□□□□ -0.18
UBE2F-220ENST00000472479 IL2RBP14784 551 aa13.91□□□□□ -0.18
UBE2F-220ENST00000472479 NEUROD2Q15784 382 aa13.91□□□□□ -0.18
UBE2F-220ENST00000472479 PLEKHO1Q53GL0 409 aaPredicted RBP13.91□□□□□ -0.18
UBE2F-220ENST00000472479 YTHDC1Q96MU7 727 aaKnown RBP13.91□□□□□ -0.18
UBE2F-220ENST00000472479 SALL2Q9Y467 1007 aaPredicted RBP13.91□□□□□ -0.18
UBE2F-220ENST00000472479 SLIT2O94813 1529 aa13.9□□□□□ -0.18
UBE2F-220ENST00000472479 RSPH6AQ9H0K4 717 aa13.9□□□□□ -0.18
UBE2F-220ENST00000472479 THRAP3Q9Y2W1 955 aaKnown RBP13.9□□□□□ -0.18
UBE2F-220ENST00000472479 SPATA31A1Q5TZJ5 1347 aa13.9□□□□□ -0.18
UBE2F-220ENST00000472479 COL18A1P39060 1754 aa13.9□□□□□ -0.18
UBE2F-220ENST00000472479 RGPD5Q99666 1765 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms