RNA–Protein interactions for RNA: ENST00000472305.1

SEC16A-209, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 3

Gene SEC16A, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-209ENST00000472305 SLIT2O94813 1529 aa17.47■□□□□ 0.39
SEC16A-209ENST00000472305 CAMTA1Q9Y6Y1 1673 aa17.46■□□□□ 0.39
SEC16A-209ENST00000472305 PARD3Q8TEW0 1356 aa17.46■□□□□ 0.39
SEC16A-209ENST00000472305 PPP2R1AP30153 589 aa17.46■□□□□ 0.39
SEC16A-209ENST00000472305 AMPHP49418 695 aa17.46■□□□□ 0.39
SEC16A-209ENST00000472305 HSP90AB2PQ58FF8 381 aa17.46■□□□□ 0.39
SEC16A-209ENST00000472305 IP6K1Q92551 441 aa17.46■□□□□ 0.39
SEC16A-209ENST00000472305 USP21Q9UK80 565 aa17.45■□□□□ 0.38
SEC16A-209ENST00000472305 COL18A1P39060 1754 aa17.45■□□□□ 0.38
SEC16A-209ENST00000472305 BCL9LQ86UU0 1499 aa17.44■□□□□ 0.38
SEC16A-209ENST00000472305 PEAK1Q9H792 1746 aa17.44■□□□□ 0.38
SEC16A-209ENST00000472305 MTHFSP49914 203 aa17.44■□□□□ 0.38
SEC16A-209ENST00000472305 LTV1Q96GA3 475 aaPredicted RBP17.44■□□□□ 0.38
SEC16A-209ENST00000472305 PRKRIP1Q9H875 184 aaPredicted RBP17.44■□□□□ 0.38
SEC16A-209ENST00000472305 STRN4Q9NRL3 753 aa17.44■□□□□ 0.38
SEC16A-209ENST00000472305 COL14A1Q05707 1796 aaKnown RBP17.43■□□□□ 0.38
SEC16A-209ENST00000472305 LMO7Q8WWI1 1683 aa17.43■□□□□ 0.38
SEC16A-209ENST00000472305 UNC5CLQ8IV45 518 aa17.43■□□□□ 0.38
SEC16A-209ENST00000472305 RGS12O14924 1447 aa17.43■□□□□ 0.38
SEC16A-209ENST00000472305 RALBP1Q15311 655 aa17.42■□□□□ 0.38
SEC16A-209ENST00000472305 LARP1Q6PKG0 1096 aaKnown RBP17.42■□□□□ 0.38
SEC16A-209ENST00000472305 ANKRD24Q8TF21 1146 aa17.42■□□□□ 0.38
SEC16A-209ENST00000472305 LTN1O94822 1766 aa17.41■□□□□ 0.38
SEC16A-209ENST00000472305 FLT4P35916 1363 aa17.4■□□□□ 0.38
SEC16A-209ENST00000472305 SMG6Q86US8 1419 aaKnown RBP17.4■□□□□ 0.38
SEC16A-209ENST00000472305 PLCH1Q4KWH8 1693 aa17.4■□□□□ 0.38
SEC16A-209ENST00000472305 COL5A2P05997 1499 aaPredicted RBP17.4■□□□□ 0.38
SEC16A-209ENST00000472305 EP400Q96L91 3159 aa17.4■□□□□ 0.38
SEC16A-209ENST00000472305 EVA1CP58658 441 aa17.4■□□□□ 0.38
SEC16A-209ENST00000472305 MAP2P11137 1827 aaKnown RBP17.4■□□□□ 0.38
SEC16A-209ENST00000472305 RTL1A6NKG5 1358 aa17.4■□□□□ 0.38
SEC16A-209ENST00000472305 INSRP06213 1382 aa17.39■□□□□ 0.37
SEC16A-209ENST00000472305 ANP32CO43423 234 aa17.38■□□□□ 0.37
SEC16A-209ENST00000472305 CSB-PGBD3P0DP91 1061 aa17.38■□□□□ 0.37
SEC16A-209ENST00000472305 EIF4A2Q14240 407 aaKnown RBP17.38■□□□□ 0.37
SEC16A-209ENST00000472305 QTRT2Q9H974 415 aaKnown RBP17.38■□□□□ 0.37
SEC16A-209ENST00000472305 ERBB3P21860 1342 aa17.38■□□□□ 0.37
SEC16A-209ENST00000472305 KIF24Q5T7B8 1368 aa17.38■□□□□ 0.37
SEC16A-209ENST00000472305 NRAPQ86VF7 1730 aa17.38■□□□□ 0.37
SEC16A-209ENST00000472305 RGPD5Q99666 1765 aa17.38■□□□□ 0.37
SEC16A-209ENST00000472305 RBM6P78332 1123 aaKnown RBP17.37■□□□□ 0.37
SEC16A-209ENST00000472305 VPS72Q15906 364 aa17.37■□□□□ 0.37
SEC16A-209ENST00000472305 DIEXFQ68CQ4 756 aaKnown RBP17.37■□□□□ 0.37
SEC16A-209ENST00000472305 ATRNO75882 1429 aa17.37■□□□□ 0.37
SEC16A-209ENST00000472305 BLMP54132 1417 aaPredicted RBP17.37■□□□□ 0.37
SEC16A-209ENST00000472305 TOM1L2Q6ZVM7 507 aa17.36■□□□□ 0.37
SEC16A-209ENST00000472305 USP35Q9P2H5 1018 aa17.36■□□□□ 0.37
SEC16A-209ENST00000472305 TRPC5Q9UL62 973 aaPredicted RBP17.36■□□□□ 0.37
SEC16A-209ENST00000472305 CCDC9Q9Y3X0 531 aaKnown RBP17.36■□□□□ 0.37
SEC16A-209ENST00000472305 WDR17Q8IZU2 1322 aa17.36■□□□□ 0.37
SEC16A-209ENST00000472305 MYBBP1AQ9BQG0 1328 aaKnown RBP17.36■□□□□ 0.37
SEC16A-209ENST00000472305 ABCC6O95255 1503 aa17.36■□□□□ 0.37
SEC16A-209ENST00000472305 IL13P35225 146 aa17.35■□□□□ 0.37
SEC16A-209ENST00000472305 CCDC184Q52MB2 194 aa17.35■□□□□ 0.37
SEC16A-209ENST00000472305 NBPF6Q5VWK0 638 aa17.35■□□□□ 0.37
SEC16A-209ENST00000472305 USHBP1Q8N6Y0 703 aa17.35■□□□□ 0.37
SEC16A-209ENST00000472305 NBPF4Q96M43 638 aa17.35■□□□□ 0.37
SEC16A-209ENST00000472305 NLRP2Q9NX02 1062 aa17.35■□□□□ 0.37
SEC16A-209ENST00000472305 SPATA31A5Q5VU36 1347 aa17.34■□□□□ 0.37
SEC16A-209ENST00000472305 SPATA31A7Q8IWB4 1347 aa17.34■□□□□ 0.37
SEC16A-209ENST00000472305 NWD2Q9ULI1 1742 aa17.34■□□□□ 0.37
SEC16A-209ENST00000472305 COL3A1P02461 1466 aaPredicted RBP17.33■□□□□ 0.37
SEC16A-209ENST00000472305 SPATA31A1Q5TZJ5 1347 aa17.33■□□□□ 0.36
SEC16A-209ENST00000472305 GJD4Q96KN9 370 aaPredicted RBP17.33■□□□□ 0.36
SEC16A-209ENST00000472305 EYA1Q99502 592 aa17.33■□□□□ 0.36
SEC16A-209ENST00000472305 CARD10Q9BWT7 1032 aa17.32■□□□□ 0.36
SEC16A-209ENST00000472305 CRB1P82279 1406 aa17.31■□□□□ 0.36
SEC16A-209ENST00000472305 DIAPH1O60610 1272 aaKnown RBP17.31■□□□□ 0.36
SEC16A-209ENST00000472305 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.3■□□□□ 0.36
SEC16A-209ENST00000472305 GLI3P10071 1580 aa17.3■□□□□ 0.36
SEC16A-209ENST00000472305 FAM98CQ17RN3 349 aaKnown RBP17.29■□□□□ 0.36
SEC16A-209ENST00000472305 AEBP1Q8IUX7 1158 aa17.29■□□□□ 0.36
SEC16A-209ENST00000472305 TCP11L2Q8N4U5 519 aa17.29■□□□□ 0.36
SEC16A-209ENST00000472305 CFAP53Q96M91 514 aa17.29■□□□□ 0.36
SEC16A-209ENST00000472305 RGPD2P0DJD1 1756 aa17.28■□□□□ 0.36
SEC16A-209ENST00000472305 U2SURPO15042 1029 aaKnown RBP17.27■□□□□ 0.36
SEC16A-209ENST00000472305 MIER1Q8N108 512 aa17.27■□□□□ 0.36
SEC16A-209ENST00000472305 IGSF1Q8N6C5 1336 aa17.26■□□□□ 0.35
SEC16A-209ENST00000472305 HMOX1P09601 288 aa17.26■□□□□ 0.35
SEC16A-209ENST00000472305 SULT6B1Q6IMI4 303 aa17.25■□□□□ 0.35
SEC16A-209ENST00000472305 BARGINQ6ZT62 677 aa17.25■□□□□ 0.35
SEC16A-209ENST00000472305 ONECUT3O60422 494 aaPredicted RBP17.24■□□□□ 0.35
SEC16A-209ENST00000472305 THRAP3Q9Y2W1 955 aaKnown RBP17.24■□□□□ 0.35
SEC16A-209ENST00000472305 FAM208AQ9UK61 1670 aaKnown RBP17.23■□□□□ 0.35
SEC16A-209ENST00000472305 DISP2A7MBM2 1401 aa17.23■□□□□ 0.35
SEC16A-209ENST00000472305 NCAPD2Q15021 1401 aa17.23■□□□□ 0.35
SEC16A-209ENST00000472305 CCDC125Q86Z20 511 aa17.23■□□□□ 0.35
SEC16A-209ENST00000472305 SEPT12Q8IYM1 358 aa17.23■□□□□ 0.35
SEC16A-209ENST00000472305 MEGF6O75095 1541 aa17.22■□□□□ 0.35
SEC16A-209ENST00000472305 U2AF1L5P0DN76 240 aaPredicted RBP17.22■□□□□ 0.35
SEC16A-209ENST00000472305 IL2RBP14784 551 aa17.22■□□□□ 0.35
SEC16A-209ENST00000472305 U2AF1Q01081 240 aaKnown RBP eCLIP17.22■□□□□ 0.35
SEC16A-209ENST00000472305 MRS2Q9HD23 443 aa17.22■□□□□ 0.35
SEC16A-209ENST00000472305 NUDCQ9Y266 331 aa17.22■□□□□ 0.35
SEC16A-209ENST00000472305 A0A0G2JS52 829 aa17.21■□□□□ 0.35
SEC16A-209ENST00000472305 MYT1Q01538 1121 aa17.21■□□□□ 0.35
SEC16A-209ENST00000472305 RGPD1P0DJD0 1748 aa17.21■□□□□ 0.35
SEC16A-209ENST00000472305 LRP5O75197 1615 aa17.21■□□□□ 0.35
SEC16A-209ENST00000472305 KDRP35968 1356 aa17.19■□□□□ 0.34
SEC16A-209ENST00000472305 TATP17735 454 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms