RNA–Protein interactions for RNA: ENST00000471995.5

RBM5-215, Transcript of RNA binding motif protein 5, human

TSL 3

Gene RBM5, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM5-215	ENST00000471995	C4orf48	Q5BLP8	95 aa		11.97	□□□□□ -0.49
RBM5-215	ENST00000471995	TRMT44	Q8IYL2	757 aa	Known RBP	11.97	□□□□□ -0.49
RBM5-215	ENST00000471995	PPEF1	O14829	653 aa	Predicted RBP	11.96	□□□□□ -0.49
RBM5-215	ENST00000471995	RPIA	P49247	311 aa		11.96	□□□□□ -0.49
RBM5-215	ENST00000471995	WNT7B	P56706	349 aa		11.96	□□□□□ -0.49
RBM5-215	ENST00000471995	LINC01559	Q495D7	138 aa		11.96	□□□□□ -0.49
RBM5-215	ENST00000471995	RNF20	Q5VTR2	975 aa		11.96	□□□□□ -0.49
RBM5-215	ENST00000471995	PLPP7	Q8NBV4	271 aa		11.96	□□□□□ -0.49
RBM5-215	ENST00000471995	CARD14	Q9BXL6	1004 aa		11.96	□□□□□ -0.49
RBM5-215	ENST00000471995	ZBTB7C	A1YPR0	619 aa		11.95	□□□□□ -0.5
RBM5-215	ENST00000471995	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.95	□□□□□ -0.5
RBM5-215	ENST00000471995	TRIM32	Q13049	653 aa		11.94	□□□□□ -0.5
RBM5-215	ENST00000471995	NBPF20	Q3BBV1	942 aa		11.93	□□□□□ -0.5
RBM5-215	ENST00000471995	TRAF7	Q6Q0C0	670 aa		11.93	□□□□□ -0.5
RBM5-215	ENST00000471995	SEPT12	Q8IYM1	358 aa		11.93	□□□□□ -0.5
RBM5-215	ENST00000471995	SLC10A4	Q96EP9	437 aa		11.93	□□□□□ -0.5
RBM5-215	ENST00000471995	ESPN	B1AK53	854 aa		11.92	□□□□□ -0.5
RBM5-215	ENST00000471995	ATP5J2-PTCD1	G3V325	749 aa		11.92	□□□□□ -0.5
RBM5-215	ENST00000471995	VARS	P26640	1264 aa	Known RBP	11.92	□□□□□ -0.5
RBM5-215	ENST00000471995	CDCA8	Q53HL2	280 aa		11.92	□□□□□ -0.5
RBM5-215	ENST00000471995	IFFO2	Q5TF58	517 aa		11.92	□□□□□ -0.5
RBM5-215	ENST00000471995	PPP1R18	Q6NYC8	613 aa		11.92	□□□□□ -0.5
RBM5-215	ENST00000471995	MKRN1	Q9UHC7	482 aa	Known RBP	11.92	□□□□□ -0.5
RBM5-215	ENST00000471995	FAM196B	A6NMK8	535 aa		11.91	□□□□□ -0.5
RBM5-215	ENST00000471995	NCOA4	Q13772	614 aa		11.91	□□□□□ -0.5
RBM5-215	ENST00000471995	EML3	Q32P44	896 aa		11.91	□□□□□ -0.5
RBM5-215	ENST00000471995	PLA2G2C	Q5R387	149 aa		11.91	□□□□□ -0.5
RBM5-215	ENST00000471995	GIGYF1	O75420	1035 aa	Predicted RBP	11.9	□□□□□ -0.5
RBM5-215	ENST00000471995	CD2BP2	O95400	341 aa	Known RBP	11.9	□□□□□ -0.5
RBM5-215	ENST00000471995	PATL2	C9JE40	543 aa	Known RBP	11.89	□□□□□ -0.51
RBM5-215	ENST00000471995	DEPDC4	Q8N2C3	294 aa		11.89	□□□□□ -0.51
RBM5-215	ENST00000471995	PODXL2	Q9NZ53	605 aa		11.89	□□□□□ -0.51
RBM5-215	ENST00000471995	MAP4K5	Q9Y4K4	846 aa		11.89	□□□□□ -0.51
RBM5-215	ENST00000471995	TMEM88B	A6NKF7	163 aa		11.88	□□□□□ -0.51
RBM5-215	ENST00000471995	BRD1	O95696	1058 aa		11.88	□□□□□ -0.51
RBM5-215	ENST00000471995	LARP1	Q6PKG0	1096 aa	Known RBP	11.88	□□□□□ -0.51
RBM5-215	ENST00000471995	TRIM50	Q86XT4	487 aa		11.88	□□□□□ -0.51
RBM5-215	ENST00000471995	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.88	□□□□□ -0.51
RBM5-215	ENST00000471995	SKOR1	P84550	965 aa		11.87	□□□□□ -0.51
RBM5-215	ENST00000471995	TSGA10IP	Q3SY00	556 aa		11.87	□□□□□ -0.51
RBM5-215	ENST00000471995	DOLK	Q9UPQ8	538 aa		11.87	□□□□□ -0.51
RBM5-215	ENST00000471995	NOD1	Q9Y239	953 aa		11.87	□□□□□ -0.51
RBM5-215	ENST00000471995	ATP1A2	P50993	1020 aa		11.86	□□□□□ -0.51
RBM5-215	ENST00000471995	SIRT1	Q96EB6	747 aa		11.86	□□□□□ -0.51
RBM5-215	ENST00000471995	RASA1	P20936	1047 aa		11.85	□□□□□ -0.51
RBM5-215	ENST00000471995	PTK7	Q13308	1070 aa		11.85	□□□□□ -0.51
RBM5-215	ENST00000471995	MPND	Q8N594	471 aa		11.85	□□□□□ -0.51
RBM5-215	ENST00000471995	NOVA2	Q9UNW9	492 aa	Known RBP	11.85	□□□□□ -0.51
RBM5-215	ENST00000471995	USP17L15	C9J2P7	530 aa		11.84	□□□□□ -0.51
RBM5-215	ENST00000471995	USP17L10	C9JJH3	530 aa		11.84	□□□□□ -0.51
RBM5-215	ENST00000471995	USP17L13	C9JLJ4	530 aa		11.84	□□□□□ -0.51
RBM5-215	ENST00000471995	USP17L12	C9JPN9	530 aa		11.84	□□□□□ -0.51
RBM5-215	ENST00000471995	USP17L11	C9JVI0	530 aa		11.84	□□□□□ -0.51
RBM5-215	ENST00000471995	USP17L21	D6R901	530 aa		11.84	□□□□□ -0.51
RBM5-215	ENST00000471995	USP17L18	D6R9N7	530 aa		11.84	□□□□□ -0.51
RBM5-215	ENST00000471995	USP17L22	D6RA61	530 aa		11.84	□□□□□ -0.51
RBM5-215	ENST00000471995	USP17L17	D6RBQ6	530 aa		11.84	□□□□□ -0.51
RBM5-215	ENST00000471995	USP17L19	D6RCP7	530 aa		11.84	□□□□□ -0.51
RBM5-215	ENST00000471995	USP17L20	D6RJB6	530 aa		11.84	□□□□□ -0.51
RBM5-215	ENST00000471995	USP17L24	Q0WX57	530 aa		11.84	□□□□□ -0.51
RBM5-215	ENST00000471995	AEBP1	Q8IUX7	1158 aa		11.84	□□□□□ -0.51
RBM5-215	ENST00000471995	KCTD15	Q96SI1	283 aa	Predicted RBP	11.84	□□□□□ -0.51
RBM5-215	ENST00000471995	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.84	□□□□□ -0.51
RBM5-215	ENST00000471995	ZMIZ1	Q9ULJ6	1067 aa		11.84	□□□□□ -0.51
RBM5-215	ENST00000471995	USP4	Q13107	963 aa		11.83	□□□□□ -0.52
RBM5-215	ENST00000471995	CRTC2	Q53ET0	693 aa	Predicted RBP	11.83	□□□□□ -0.52
RBM5-215	ENST00000471995	LARGE2	Q8N3Y3	721 aa		11.83	□□□□□ -0.52
RBM5-215	ENST00000471995	OGFOD1	Q8N543	542 aa		11.83	□□□□□ -0.52
RBM5-215	ENST00000471995	TRIM52	Q96A61	297 aa		11.83	□□□□□ -0.52
RBM5-215	ENST00000471995	CDK15	Q96Q40	435 aa		11.83	□□□□□ -0.52
RBM5-215	ENST00000471995	KCNA1	Q09470	495 aa		11.82	□□□□□ -0.52
RBM5-215	ENST00000471995	MMRN1	Q13201	1228 aa		11.82	□□□□□ -0.52
RBM5-215	ENST00000471995	RC3H1	Q5TC82	1133 aa	Known RBP	11.81	□□□□□ -0.52
RBM5-215	ENST00000471995	ANKMY2	Q8IV38	441 aa		11.81	□□□□□ -0.52
RBM5-215	ENST00000471995	FAM200A	Q8TCP9	573 aa		11.81	□□□□□ -0.52
RBM5-215	ENST00000471995	DNAAF2	Q9NVR5	837 aa	Known RBP	11.81	□□□□□ -0.52
RBM5-215	ENST00000471995	TMEM164	Q5U3C3	297 aa		11.8	□□□□□ -0.52
RBM5-215	ENST00000471995	B4GALNT3	Q6L9W6	998 aa		11.8	□□□□□ -0.52
RBM5-215	ENST00000471995	LIAT1	Q6ZQX7	453 aa		11.8	□□□□□ -0.52
RBM5-215	ENST00000471995	VASH1	Q7L8A9	365 aa	Predicted RBP	11.8	□□□□□ -0.52
RBM5-215	ENST00000471995	EHBP1	Q8NDI1	1231 aa		11.8	□□□□□ -0.52
RBM5-215	ENST00000471995	ZBTB7B	O15156	539 aa	Predicted RBP	11.79	□□□□□ -0.52
RBM5-215	ENST00000471995	CLDN10	P78369	228 aa		11.79	□□□□□ -0.52
RBM5-215	ENST00000471995	OXLD1	Q5BKU9	147 aa		11.79	□□□□□ -0.52
RBM5-215	ENST00000471995	SIX5	Q8N196	739 aa		11.79	□□□□□ -0.52
RBM5-215	ENST00000471995	PCDHB11	Q9Y5F2	797 aa		11.79	□□□□□ -0.52
RBM5-215	ENST00000471995	STK32A	Q8WU08	396 aa		11.78	□□□□□ -0.52
RBM5-215	ENST00000471995	SIAH2	O43255	324 aa		11.77	□□□□□ -0.53
RBM5-215	ENST00000471995	GTF2I	P78347	998 aa		11.77	□□□□□ -0.53
RBM5-215	ENST00000471995	INTS6L	Q5JSJ4	861 aa	Known RBP	11.77	□□□□□ -0.53
RBM5-215	ENST00000471995	EMID1	Q96A84	441 aa	Predicted RBP	11.77	□□□□□ -0.53
RBM5-215	ENST00000471995	PCDHGA11	Q9Y5H2	935 aa		11.77	□□□□□ -0.53
RBM5-215	ENST00000471995	DKK1	O94907	266 aa		11.76	□□□□□ -0.53
RBM5-215	ENST00000471995	SLC19A1	P41440	591 aa		11.76	□□□□□ -0.53
RBM5-215	ENST00000471995	FAM69C	Q0P6D2	419 aa		11.76	□□□□□ -0.53
RBM5-215	ENST00000471995	SWI5	Q1ZZU3	235 aa		11.76	□□□□□ -0.53
RBM5-215	ENST00000471995	CARNS1	A5YM72	827 aa		11.75	□□□□□ -0.53
RBM5-215	ENST00000471995	WNT7A	O00755	349 aa		11.75	□□□□□ -0.53
RBM5-215	ENST00000471995	GRM5	P41594	1212 aa		11.75	□□□□□ -0.53
RBM5-215	ENST00000471995	DHX9	Q08211	1270 aa	Known RBP	11.75	□□□□□ -0.53

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