RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 NLRP6P59044 892 aa28.79■■■□□ 2.2
CCDC78-208ENST00000471861 DDB1Q16531 1140 aa28.79■■■□□ 2.2
CCDC78-208ENST00000471861 PROM2Q8N271 834 aa28.79■■■□□ 2.2
CCDC78-208ENST00000471861 BCL11BQ9C0K0 894 aaPredicted RBP28.78■■■□□ 2.2
CCDC78-208ENST00000471861 AXIN2Q9Y2T1 843 aa28.78■■■□□ 2.2
CCDC78-208ENST00000471861 BCL9O00512 1426 aa28.77■■■□□ 2.2
CCDC78-208ENST00000471861 MYOM1P52179 1685 aa28.77■■■□□ 2.2
CCDC78-208ENST00000471861 MARCH10Q8NA82 808 aaPredicted RBP28.77■■■□□ 2.2
CCDC78-208ENST00000471861 CABP1Q9NZU7 370 aa28.77■■■□□ 2.2
CCDC78-208ENST00000471861 CPSF1Q10570 1443 aaKnown RBP28.77■■■□□ 2.2
CCDC78-208ENST00000471861 TOM1L2Q6ZVM7 507 aa28.76■■■□□ 2.19
CCDC78-208ENST00000471861 WDR17Q8IZU2 1322 aa28.75■■■□□ 2.19
CCDC78-208ENST00000471861 AKAP12Q02952 1782 aa28.75■■■□□ 2.19
CCDC78-208ENST00000471861 UTRNP46939 3433 aa28.72■■■□□ 2.19
CCDC78-208ENST00000471861 PTGER2P43116 358 aa28.72■■■□□ 2.19
CCDC78-208ENST00000471861 ZBTB7AO95365 584 aa28.71■■■□□ 2.19
CCDC78-208ENST00000471861 RGPD5Q99666 1765 aa28.7■■■□□ 2.19
CCDC78-208ENST00000471861 ARHGEF25Q86VW2 580 aa28.69■■■□□ 2.18
CCDC78-208ENST00000471861 DCAF8L1A6NGE4 600 aa28.68■■■□□ 2.18
CCDC78-208ENST00000471861 NFAT5O94916 1531 aa28.67■■■□□ 2.18
CCDC78-208ENST00000471861 CDCA7Q9BWT1 371 aaPredicted RBP28.66■■■□□ 2.18
CCDC78-208ENST00000471861 CARD10Q9BWT7 1032 aa28.65■■■□□ 2.18
CCDC78-208ENST00000471861 TRPM1Q7Z4N2 1603 aa28.65■■■□□ 2.18
CCDC78-208ENST00000471861 TXNRD1Q16881 649 aa28.64■■■□□ 2.18
CCDC78-208ENST00000471861 TTC21BQ7Z4L5 1316 aa28.64■■■□□ 2.17
CCDC78-208ENST00000471861 ATF5Q9Y2D1 282 aaPredicted RBP28.63■■■□□ 2.17
CCDC78-208ENST00000471861 TNS2Q63HR2 1409 aa28.62■■■□□ 2.17
CCDC78-208ENST00000471861 SLC15A2Q16348 729 aa28.61■■■□□ 2.17
CCDC78-208ENST00000471861 NHSQ6T4R5 1651 aa28.61■■■□□ 2.17
CCDC78-208ENST00000471861 SOX12O15370 315 aa28.6■■■□□ 2.17
CCDC78-208ENST00000471861 STK32BQ9NY57 414 aa28.6■■■□□ 2.17
CCDC78-208ENST00000471861 PAPPAQ13219 1627 aa28.6■■■□□ 2.17
CCDC78-208ENST00000471861 KCNH5Q8NCM2 988 aa28.59■■■□□ 2.17
CCDC78-208ENST00000471861 SGIP1Q9BQI5 828 aa28.59■■■□□ 2.17
CCDC78-208ENST00000471861 EVC2Q86UK5 1308 aa28.59■■■□□ 2.17
CCDC78-208ENST00000471861 ABCC6O95255 1503 aa28.59■■■□□ 2.17
CCDC78-208ENST00000471861 CSB-PGBD3P0DP91 1061 aa28.58■■■□□ 2.17
CCDC78-208ENST00000471861 ZNF784Q8NCA9 323 aaPredicted RBP28.58■■■□□ 2.17
CCDC78-208ENST00000471861 FHDC1Q9C0D6 1143 aaPredicted RBP28.58■■■□□ 2.17
CCDC78-208ENST00000471861 CCDC7Q96M83 1385 aa28.57■■■□□ 2.16
CCDC78-208ENST00000471861 SYT17Q9BSW7 474 aa28.56■■■□□ 2.16
CCDC78-208ENST00000471861 TTC21AQ8NDW8 1320 aa28.55■■■□□ 2.16
CCDC78-208ENST00000471861 EXOC5O00471 708 aa28.55■■■□□ 2.16
CCDC78-208ENST00000471861 MTFR1LQ9H019 292 aa28.55■■■□□ 2.16
CCDC78-208ENST00000471861 ZNF692Q9BU19 519 aaPredicted RBP28.53■■■□□ 2.16
CCDC78-208ENST00000471861 MON2Q7Z3U7 1717 aa28.52■■■□□ 2.16
CCDC78-208ENST00000471861 L3MBTL2Q969R5 705 aa28.52■■■□□ 2.16
CCDC78-208ENST00000471861 USP54Q70EL1 1684 aa28.51■■■□□ 2.15
CCDC78-208ENST00000471861 ACSBG1Q96GR2 724 aa28.5■■■□□ 2.15
CCDC78-208ENST00000471861 KTN1Q86UP2 1357 aaKnown RBP28.49■■■□□ 2.15
CCDC78-208ENST00000471861 BTAF1O14981 1849 aa28.48■■■□□ 2.15
CCDC78-208ENST00000471861 ERBB3P21860 1342 aa28.47■■■□□ 2.15
CCDC78-208ENST00000471861 ZNF827Q17R98 1081 aa28.45■■■□□ 2.14
CCDC78-208ENST00000471861 USP31Q70CQ4 1352 aa28.45■■■□□ 2.14
CCDC78-208ENST00000471861 MAP3K5Q99683 1374 aa28.45■■■□□ 2.14
CCDC78-208ENST00000471861 CHD4Q14839 1912 aa28.45■■■□□ 2.14
CCDC78-208ENST00000471861 ROCK2O75116 1388 aaKnown RBP28.44■■■□□ 2.14
CCDC78-208ENST00000471861 CD163L1Q9NR16 1453 aa28.44■■■□□ 2.14
CCDC78-208ENST00000471861 LTN1O94822 1766 aa28.43■■■□□ 2.14
CCDC78-208ENST00000471861 ARXQ96QS3 562 aa28.43■■■□□ 2.14
CCDC78-208ENST00000471861 LRRC4BQ9NT99 713 aa28.42■■■□□ 2.14
CCDC78-208ENST00000471861 SBNO2Q9Y2G9 1366 aa28.4■■■□□ 2.14
CCDC78-208ENST00000471861 IL2RBP14784 551 aa28.4■■■□□ 2.14
CCDC78-208ENST00000471861 NME9Q86XW9 330 aa28.4■■■□□ 2.14
CCDC78-208ENST00000471861 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.4■■■□□ 2.14
CCDC78-208ENST00000471861 NLRP2Q9NX02 1062 aa28.4■■■□□ 2.14
CCDC78-208ENST00000471861 SIN3AQ96ST3 1273 aa28.37■■■□□ 2.13
CCDC78-208ENST00000471861 ANKRD24Q8TF21 1146 aa28.36■■■□□ 2.13
CCDC78-208ENST00000471861 COL24A1Q17RW2 1714 aa28.35■■■□□ 2.13
CCDC78-208ENST00000471861 QSER1Q2KHR3 1735 aa28.35■■■□□ 2.13
CCDC78-208ENST00000471861 C1QTNF8P60827 252 aa28.34■■■□□ 2.13
CCDC78-208ENST00000471861 AKT1S1Q96B36 256 aa28.34■■■□□ 2.13
CCDC78-208ENST00000471861 GOLGB1Q14789 3259 aaKnown RBP28.33■■■□□ 2.13
CCDC78-208ENST00000471861 SENP3-EIF4A1A0A087X0R7 540 aa28.33■■■□□ 2.13
CCDC78-208ENST00000471861 TUBGCP6Q96RT7 1819 aa28.33■■■□□ 2.13
CCDC78-208ENST00000471861 PNPLA7Q6ZV29 1317 aa28.29■■■□□ 2.12
CCDC78-208ENST00000471861 EDC4Q6P2E9 1401 aaKnown RBP28.28■■■□□ 2.12
CCDC78-208ENST00000471861 GPR162Q16538 588 aa28.26■■■□□ 2.11
CCDC78-208ENST00000471861 KCNQ4P56696 695 aa28.25■■■□□ 2.11
CCDC78-208ENST00000471861 SLC27A3Q5K4L6 730 aa28.25■■■□□ 2.11
CCDC78-208ENST00000471861 SLC12A5Q9H2X9 1139 aa28.25■■■□□ 2.11
CCDC78-208ENST00000471861 DOT1LQ8TEK3 1739 aa28.25■■■□□ 2.11
CCDC78-208ENST00000471861 FAM208AQ9UK61 1670 aaKnown RBP28.25■■■□□ 2.11
CCDC78-208ENST00000471861 KAT6BQ8WYB5 2073 aa28.25■■■□□ 2.11
CCDC78-208ENST00000471861 A0A1W2PP64 1363 aa28.24■■■□□ 2.11
CCDC78-208ENST00000471861 NSD2O96028 1365 aa28.24■■■□□ 2.11
CCDC78-208ENST00000471861 SLC16A10Q8TF71 515 aa28.24■■■□□ 2.11
CCDC78-208ENST00000471861 SHANK3Q9BYB0 1731 aa28.23■■■□□ 2.11
CCDC78-208ENST00000471861 NEUROD1Q13562 356 aa28.23■■■□□ 2.11
CCDC78-208ENST00000471861 KLHL34Q8N239 644 aa28.23■■■□□ 2.11
CCDC78-208ENST00000471861 LY75O60449 1722 aa28.23■■■□□ 2.11
CCDC78-208ENST00000471861 NLGN2Q8NFZ4 835 aa28.22■■■□□ 2.11
CCDC78-208ENST00000471861 DDX54Q8TDD1 881 aaKnown RBP28.22■■■□□ 2.11
CCDC78-208ENST00000471861 TMC1Q8TDI8 760 aa28.22■■■□□ 2.11
CCDC78-208ENST00000471861 HDGFL2Q7Z4V5 671 aaPredicted RBP28.21■■■□□ 2.11
CCDC78-208ENST00000471861 IP6K1Q92551 441 aa28.21■■■□□ 2.11
CCDC78-208ENST00000471861 ANKRD36BQ8N2N9 1353 aa28.2■■■□□ 2.1
CCDC78-208ENST00000471861 POLD1P28340 1107 aa28.19■■■□□ 2.1
CCDC78-208ENST00000471861 LTV1Q96GA3 475 aaPredicted RBP28.18■■■□□ 2.1
CCDC78-208ENST00000471861 PRIM1P49642 420 aaKnown RBP28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms