RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TESK2Q96S53 571 aa11.52□□□□□ -0.57
USP48-207ENST00000471752 AATKQ6ZMQ8 1374 aa11.52□□□□□ -0.57
USP48-207ENST00000471752 KTN1Q86UP2 1357 aaKnown RBP11.52□□□□□ -0.57
USP48-207ENST00000471752 MARCH10Q8NA82 808 aaPredicted RBP11.51□□□□□ -0.57
USP48-207ENST00000471752 ZNF692Q9BU19 519 aaPredicted RBP11.51□□□□□ -0.57
USP48-207ENST00000471752 PIK3C2AO00443 1686 aa11.51□□□□□ -0.57
USP48-207ENST00000471752 SLIT3O75094 1523 aa11.5□□□□□ -0.57
USP48-207ENST00000471752 TRIM26Q12899 539 aaPredicted RBP11.5□□□□□ -0.57
USP48-207ENST00000471752 TOM1L2Q6ZVM7 507 aa11.5□□□□□ -0.57
USP48-207ENST00000471752 SBNO2Q9Y2G9 1366 aa11.5□□□□□ -0.57
USP48-207ENST00000471752 PROM2Q8N271 834 aa11.49□□□□□ -0.57
USP48-207ENST00000471752 TONSLQ96HA7 1378 aa11.49□□□□□ -0.57
USP48-207ENST00000471752 COL18A1P39060 1754 aa11.49□□□□□ -0.57
USP48-207ENST00000471752 BRD4O60885 1362 aaPredicted RBP11.48□□□□□ -0.57
USP48-207ENST00000471752 CRB1P82279 1406 aa11.48□□□□□ -0.57
USP48-207ENST00000471752 WDR17Q8IZU2 1322 aa11.47□□□□□ -0.57
USP48-207ENST00000471752 PDGFDQ9GZP0 370 aaPredicted RBP11.47□□□□□ -0.57
USP48-207ENST00000471752 THRAP3Q9Y2W1 955 aaKnown RBP11.47□□□□□ -0.57
USP48-207ENST00000471752 NFAT5O94916 1531 aa11.46□□□□□ -0.57
USP48-207ENST00000471752 TTC21AQ8NDW8 1320 aa11.46□□□□□ -0.57
USP48-207ENST00000471752 KCNQ2O43526 872 aa11.46□□□□□ -0.57
USP48-207ENST00000471752 CSB-PGBD3P0DP91 1061 aa11.46□□□□□ -0.57
USP48-207ENST00000471752 DDB1Q16531 1140 aa11.46□□□□□ -0.57
USP48-207ENST00000471752 DISP2A7MBM2 1401 aa11.45□□□□□ -0.58
USP48-207ENST00000471752 A0A1W2PP64 1363 aa11.45□□□□□ -0.58
USP48-207ENST00000471752 USP31Q70CQ4 1352 aa11.45□□□□□ -0.58
USP48-207ENST00000471752 KCNH5Q8NCM2 988 aa11.45□□□□□ -0.58
USP48-207ENST00000471752 CARD10Q9BWT7 1032 aa11.45□□□□□ -0.58
USP48-207ENST00000471752 TNS1Q9HBL0 1735 aaKnown RBP11.45□□□□□ -0.58
USP48-207ENST00000471752 ANO8Q9HCE9 1232 aaPredicted RBP11.44□□□□□ -0.58
USP48-207ENST00000471752 LTV1Q96GA3 475 aaPredicted RBP11.43□□□□□ -0.58
USP48-207ENST00000471752 PCGF6Q9BYE7 350 aa11.43□□□□□ -0.58
USP48-207ENST00000471752 NLRP2Q9NX02 1062 aa11.43□□□□□ -0.58
USP48-207ENST00000471752 AKAP12Q02952 1782 aa11.43□□□□□ -0.58
USP48-207ENST00000471752 RGPD5Q99666 1765 aa11.42□□□□□ -0.58
USP48-207ENST00000471752 NPM3O75607 178 aaKnown RBP11.42□□□□□ -0.58
USP48-207ENST00000471752 HDGFL2Q7Z4V5 671 aaPredicted RBP11.42□□□□□ -0.58
USP48-207ENST00000471752 ANKRD24Q8TF21 1146 aa11.42□□□□□ -0.58
USP48-207ENST00000471752 ACSBG1Q96GR2 724 aa11.42□□□□□ -0.58
USP48-207ENST00000471752 EXOC5O00471 708 aa11.41□□□□□ -0.58
USP48-207ENST00000471752 BCL11BQ9C0K0 894 aaPredicted RBP11.41□□□□□ -0.58
USP48-207ENST00000471752 RGPD1P0DJD0 1748 aa11.4□□□□□ -0.58
USP48-207ENST00000471752 PEAK1Q9H792 1746 aa11.4□□□□□ -0.58
USP48-207ENST00000471752 ERBB3P21860 1342 aa11.4□□□□□ -0.58
USP48-207ENST00000471752 CARD14Q9BXL6 1004 aa11.4□□□□□ -0.58
USP48-207ENST00000471752 GGNBP2Q9H3C7 697 aa11.4□□□□□ -0.58
USP48-207ENST00000471752 TERF2IPQ9NYB0 399 aa11.4□□□□□ -0.58
USP48-207ENST00000471752 MAP3K19Q56UN5 1328 aa11.39□□□□□ -0.59
USP48-207ENST00000471752 OVOS2A0A0G2JMS6 1433 aa11.39□□□□□ -0.59
USP48-207ENST00000471752 OVOS2A0A0J9YW53 1432 aa11.39□□□□□ -0.59
USP48-207ENST00000471752 FYB1O15117 783 aa11.39□□□□□ -0.59
USP48-207ENST00000471752 RRS1Q15050 365 aaKnown RBP11.39□□□□□ -0.59
USP48-207ENST00000471752 OVOS2Q6IE36 1432 aa11.39□□□□□ -0.59
USP48-207ENST00000471752 EDC4Q6P2E9 1401 aaKnown RBP11.39□□□□□ -0.59
USP48-207ENST00000471752 IP6K1Q92551 441 aa11.39□□□□□ -0.59
USP48-207ENST00000471752 PUS7Q96PZ0 661 aaKnown RBP11.39□□□□□ -0.59
USP48-207ENST00000471752 PARP4Q9UKK3 1724 aaKnown RBP11.39□□□□□ -0.59
USP48-207ENST00000471752 LRRC37A3O60309 1634 aa11.38□□□□□ -0.59
USP48-207ENST00000471752 MON2Q7Z3U7 1717 aa11.38□□□□□ -0.59
USP48-207ENST00000471752 PLSCR1O15162 318 aa11.38□□□□□ -0.59
USP48-207ENST00000471752 USP47Q96K76 1375 aa11.38□□□□□ -0.59
USP48-207ENST00000471752 KCNQ4P56696 695 aa11.37□□□□□ -0.59
USP48-207ENST00000471752 USHBP1Q8N6Y0 703 aa11.37□□□□□ -0.59
USP48-207ENST00000471752 IL2RBP14784 551 aa11.36□□□□□ -0.59
USP48-207ENST00000471752 HOXC9P31274 260 aa11.36□□□□□ -0.59
USP48-207ENST00000471752 TXNRD1Q16881 649 aa11.36□□□□□ -0.59
USP48-207ENST00000471752 NBPF6Q5VWK0 638 aa11.36□□□□□ -0.59
USP48-207ENST00000471752 DDX54Q8TDD1 881 aaKnown RBP11.36□□□□□ -0.59
USP48-207ENST00000471752 COG3Q96JB2 828 aa11.36□□□□□ -0.59
USP48-207ENST00000471752 NBPF4Q96M43 638 aa11.36□□□□□ -0.59
USP48-207ENST00000471752 CDCA7Q9BWT1 371 aaPredicted RBP11.36□□□□□ -0.59
USP48-207ENST00000471752 UTRNP46939 3433 aa11.36□□□□□ -0.59
USP48-207ENST00000471752 ZBTB7AO95365 584 aa11.35□□□□□ -0.59
USP48-207ENST00000471752 NBPF14Q5TI25 921 aa11.35□□□□□ -0.59
USP48-207ENST00000471752 LRRC4BQ9NT99 713 aa11.35□□□□□ -0.59
USP48-207ENST00000471752 PARD3Q8TEW0 1356 aa11.35□□□□□ -0.59
USP48-207ENST00000471752 CCDC7Q96M83 1385 aa11.35□□□□□ -0.59
USP48-207ENST00000471752 NUP188Q5SRE5 1749 aa11.35□□□□□ -0.59
USP48-207ENST00000471752 TMF1P82094 1093 aa11.34□□□□□ -0.59
USP48-207ENST00000471752 HSP90AB2PQ58FF8 381 aa11.34□□□□□ -0.59
USP48-207ENST00000471752 ATF5Q9Y2D1 282 aaPredicted RBP11.34□□□□□ -0.59
USP48-207ENST00000471752 RREB1Q92766 1687 aa11.33□□□□□ -0.6
USP48-207ENST00000471752 SBF2Q86WG5 1849 aa11.33□□□□□ -0.6
USP48-207ENST00000471752 AMPHP49418 695 aa11.33□□□□□ -0.6
USP48-207ENST00000471752 LRP5O75197 1615 aa11.33□□□□□ -0.6
USP48-207ENST00000471752 BCL9O00512 1426 aa11.33□□□□□ -0.6
USP48-207ENST00000471752 ANKRD36BQ8N2N9 1353 aa11.32□□□□□ -0.6
USP48-207ENST00000471752 C11orf95C9JLR9 678 aaPredicted RBP11.32□□□□□ -0.6
USP48-207ENST00000471752 ZNF827Q17R98 1081 aa11.32□□□□□ -0.6
USP48-207ENST00000471752 EMILIN1Q9Y6C2 1016 aa11.32□□□□□ -0.6
USP48-207ENST00000471752 TNS2Q63HR2 1409 aa11.32□□□□□ -0.6
USP48-207ENST00000471752 USP54Q70EL1 1684 aa11.31□□□□□ -0.6
USP48-207ENST00000471752 PTGER2P43116 358 aa11.31□□□□□ -0.6
USP48-207ENST00000471752 PRIM1P49642 420 aaKnown RBP11.31□□□□□ -0.6
USP48-207ENST00000471752 SLC15A2Q16348 729 aa11.31□□□□□ -0.6
USP48-207ENST00000471752 POLR3GLQ9BT43 218 aa11.3□□□□□ -0.6
USP48-207ENST00000471752 SPON1Q9HCB6 807 aa11.3□□□□□ -0.6
USP48-207ENST00000471752 LTN1O94822 1766 aa11.3□□□□□ -0.6
USP48-207ENST00000471752 WNK3Q9BYP7 1800 aa11.3□□□□□ -0.6
USP48-207ENST00000471752 MEGF6O75095 1541 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms