RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 PNISRQ8TF01 805 aaKnown RBP25.76■■□□□ 1.71
PSPC1-203ENST00000471658 INSRP06213 1382 aa25.76■■□□□ 1.71
PSPC1-203ENST00000471658 CPDO75976 1380 aa25.75■■□□□ 1.71
PSPC1-203ENST00000471658 FAM83GA6ND36 823 aa25.74■■□□□ 1.71
PSPC1-203ENST00000471658 DIAPH1O60610 1272 aaKnown RBP25.74■■□□□ 1.71
PSPC1-203ENST00000471658 ADAMTS2O95450 1211 aa25.74■■□□□ 1.71
PSPC1-203ENST00000471658 FAM9BQ8IZU0 186 aa25.74■■□□□ 1.71
PSPC1-203ENST00000471658 PRDM11Q9NQV5 511 aa25.74■■□□□ 1.71
PSPC1-203ENST00000471658 EIF4A2Q14240 407 aaKnown RBP25.73■■□□□ 1.71
PSPC1-203ENST00000471658 LTV1Q96GA3 475 aaPredicted RBP25.73■■□□□ 1.71
PSPC1-203ENST00000471658 KIF24Q5T7B8 1368 aa25.73■■□□□ 1.71
PSPC1-203ENST00000471658 IL13P35225 146 aa25.72■■□□□ 1.71
PSPC1-203ENST00000471658 RTL1A6NKG5 1358 aa25.72■■□□□ 1.71
PSPC1-203ENST00000471658 COL18A1P39060 1754 aa25.7■■□□□ 1.7
PSPC1-203ENST00000471658 U2SURPO15042 1029 aaKnown RBP25.69■■□□□ 1.7
PSPC1-203ENST00000471658 ADAMTS8Q9UP79 889 aa25.68■■□□□ 1.7
PSPC1-203ENST00000471658 SPATA31A6Q5VVP1 1343 aa25.67■■□□□ 1.7
PSPC1-203ENST00000471658 RGPD5Q99666 1765 aa25.67■■□□□ 1.7
PSPC1-203ENST00000471658 WDR43Q15061 677 aaKnown RBP eCLIP25.66■■□□□ 1.7
PSPC1-203ENST00000471658 ANKRD24Q8TF21 1146 aa25.66■■□□□ 1.7
PSPC1-203ENST00000471658 NUDCQ9Y266 331 aa25.66■■□□□ 1.7
PSPC1-203ENST00000471658 LRP6O75581 1613 aa25.65■■□□□ 1.7
PSPC1-203ENST00000471658 U2AF1L5P0DN76 240 aaPredicted RBP25.65■■□□□ 1.7
PSPC1-203ENST00000471658 U2AF1Q01081 240 aaKnown RBP eCLIP25.65■■□□□ 1.73e-8■□□□□ 10.5
PSPC1-203ENST00000471658 CAMTA1Q9Y6Y1 1673 aa25.65■■□□□ 1.7
PSPC1-203ENST00000471658 BLMP54132 1417 aaPredicted RBP25.64■■□□□ 1.7
PSPC1-203ENST00000471658 EYA1Q99502 592 aa25.63■■□□□ 1.69
PSPC1-203ENST00000471658 LMO7Q8WWI1 1683 aa25.63■■□□□ 1.69
PSPC1-203ENST00000471658 BTG4Q9NY30 223 aa25.62■■□□□ 1.69
PSPC1-203ENST00000471658 ERBB3P21860 1342 aa25.61■■□□□ 1.69
PSPC1-203ENST00000471658 HMOX1P09601 288 aa25.6■■□□□ 1.69
PSPC1-203ENST00000471658 NBPF6Q5VWK0 638 aa25.6■■□□□ 1.69
PSPC1-203ENST00000471658 NBPF4Q96M43 638 aa25.6■■□□□ 1.69
PSPC1-203ENST00000471658 ABCC6O95255 1503 aa25.6■■□□□ 1.69
PSPC1-203ENST00000471658 USHBP1Q8N6Y0 703 aa25.59■■□□□ 1.69
PSPC1-203ENST00000471658 COL14A1Q05707 1796 aaKnown RBP25.59■■□□□ 1.69
PSPC1-203ENST00000471658 CSB-PGBD3P0DP91 1061 aa25.59■■□□□ 1.69
PSPC1-203ENST00000471658 AEBP1Q8IUX7 1158 aa25.59■■□□□ 1.69
PSPC1-203ENST00000471658 C8orf37Q96NL8 207 aa25.59■■□□□ 1.69
PSPC1-203ENST00000471658 STRN4Q9NRL3 753 aa25.59■■□□□ 1.69
PSPC1-203ENST00000471658 SENP3-EIF4A1A0A087X0R7 540 aa25.57■■□□□ 1.68
PSPC1-203ENST00000471658 SULT6B1Q6IMI4 303 aa25.57■■□□□ 1.68
PSPC1-203ENST00000471658 CCDC146Q8IYE0 955 aa25.57■■□□□ 1.68
PSPC1-203ENST00000471658 COL5A2P05997 1499 aaPredicted RBP25.57■■□□□ 1.68
PSPC1-203ENST00000471658 IGSF1Q8N6C5 1336 aa25.56■■□□□ 1.68
PSPC1-203ENST00000471658 EVA1CP58658 441 aa25.56■■□□□ 1.68
PSPC1-203ENST00000471658 NGLY1Q96IV0 654 aa25.55■■□□□ 1.68
PSPC1-203ENST00000471658 NLRP2Q9NX02 1062 aa25.55■■□□□ 1.68
PSPC1-203ENST00000471658 RGPD2P0DJD1 1756 aa25.55■■□□□ 1.68
PSPC1-203ENST00000471658 RGPD1P0DJD0 1748 aa25.55■■□□□ 1.68
PSPC1-203ENST00000471658 MEX3CQ5U5Q3 659 aaKnown RBP25.55■■□□□ 1.68
PSPC1-203ENST00000471658 LARP1Q6PKG0 1096 aaKnown RBP25.55■■□□□ 1.68
PSPC1-203ENST00000471658 RSPH6AQ9H0K4 717 aa25.54■■□□□ 1.68
PSPC1-203ENST00000471658 WDR17Q8IZU2 1322 aa25.53■■□□□ 1.68
PSPC1-203ENST00000471658 PLCH1Q4KWH8 1693 aa25.53■■□□□ 1.68
PSPC1-203ENST00000471658 YTHDC1Q96MU7 727 aaKnown RBP25.52■■□□□ 1.68
PSPC1-203ENST00000471658 SLIT2O94813 1529 aa25.52■■□□□ 1.68
PSPC1-203ENST00000471658 FCHSD2O94868 740 aa25.52■■□□□ 1.68
PSPC1-203ENST00000471658 PRKAR2BP31323 418 aa25.51■■□□□ 1.67
PSPC1-203ENST00000471658 TOM1L2Q6ZVM7 507 aa25.51■■□□□ 1.67
PSPC1-203ENST00000471658 PLEKHF1Q96S99 279 aa25.51■■□□□ 1.67
PSPC1-203ENST00000471658 FNBP4Q8N3X1 1017 aaPredicted RBP25.48■■□□□ 1.67
PSPC1-203ENST00000471658 PHACTR3Q96KR7 559 aa25.48■■□□□ 1.67
PSPC1-203ENST00000471658 KDRP35968 1356 aa25.47■■□□□ 1.67
PSPC1-203ENST00000471658 RUNDC1Q96C34 613 aa25.47■■□□□ 1.67
PSPC1-203ENST00000471658 NCAPD2Q15021 1401 aa25.46■■□□□ 1.67
PSPC1-203ENST00000471658 UNC5CLQ8IV45 518 aa25.46■■□□□ 1.67
PSPC1-203ENST00000471658 CARD10Q9BWT7 1032 aa25.46■■□□□ 1.67
PSPC1-203ENST00000471658 USP35Q9P2H5 1018 aa25.46■■□□□ 1.67
PSPC1-203ENST00000471658 BCL9LQ86UU0 1499 aa25.46■■□□□ 1.67
PSPC1-203ENST00000471658 NRAPQ86VF7 1730 aa25.46■■□□□ 1.67
PSPC1-203ENST00000471658 AFF2P51816 1311 aa25.45■■□□□ 1.66
PSPC1-203ENST00000471658 APAF1O14727 1248 aa25.45■■□□□ 1.66
PSPC1-203ENST00000471658 USP21Q9UK80 565 aa25.45■■□□□ 1.66
PSPC1-203ENST00000471658 CRB1P82279 1406 aa25.44■■□□□ 1.66
PSPC1-203ENST00000471658 NWD2Q9ULI1 1742 aa25.44■■□□□ 1.66
PSPC1-203ENST00000471658 FAM208AQ9UK61 1670 aaKnown RBP25.43■■□□□ 1.66
PSPC1-203ENST00000471658 HNRNPUQ00839 825 aaKnown RBP eCLIP25.43■■□□□ 1.66
PSPC1-203ENST00000471658 PNNQ9H307 717 aaKnown RBP25.43■■□□□ 1.66
PSPC1-203ENST00000471658 SALL2Q9Y467 1007 aaPredicted RBP25.43■■□□□ 1.66
PSPC1-203ENST00000471658 ILDR1Q86SU0 546 aaPredicted RBP25.42■■□□□ 1.66
PSPC1-203ENST00000471658 TCP11L2Q8N4U5 519 aa25.42■■□□□ 1.66
PSPC1-203ENST00000471658 RRP7AQ9Y3A4 280 aaKnown RBP25.41■■□□□ 1.66
PSPC1-203ENST00000471658 MAPK8IP3Q9UPT6 1336 aa25.41■■□□□ 1.66
PSPC1-203ENST00000471658 CCDC9Q9Y3X0 531 aaKnown RBP25.41■■□□□ 1.66
PSPC1-203ENST00000471658 NEUROD2Q15784 382 aa25.39■■□□□ 1.66
PSPC1-203ENST00000471658 SPATA31A1Q5TZJ5 1347 aa25.38■■□□□ 1.65
PSPC1-203ENST00000471658 SPATA31A5Q5VU36 1347 aa25.38■■□□□ 1.65
PSPC1-203ENST00000471658 SPATA31A7Q8IWB4 1347 aa25.38■■□□□ 1.65
PSPC1-203ENST00000471658 VPS72Q15906 364 aa25.37■■□□□ 1.65
PSPC1-203ENST00000471658 RAPGEF4Q8WZA2 1011 aa25.37■■□□□ 1.65
PSPC1-203ENST00000471658 MEGF6O75095 1541 aa25.37■■□□□ 1.65
PSPC1-203ENST00000471658 MTHFSDQ2M296 383 aaKnown RBP25.37■■□□□ 1.65
PSPC1-203ENST00000471658 NEFMP07197 916 aa25.36■■□□□ 1.65
PSPC1-203ENST00000471658 TATP17735 454 aaPredicted RBP25.36■■□□□ 1.65
PSPC1-203ENST00000471658 TMPOP42166 694 aaKnown RBP25.36■■□□□ 1.65
PSPC1-203ENST00000471658 NFE2L2Q16236 605 aa25.34■■□□□ 1.65
PSPC1-203ENST00000471658 IL2RBP14784 551 aa25.33■■□□□ 1.65
PSPC1-203ENST00000471658 RIPK4P57078 832 aa25.32■■□□□ 1.64
PSPC1-203ENST00000471658 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms