RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 RGL4Q8IZJ4 473 aa8.94□□□□□ -0.98
NF1-208ENST00000471572 CHIC2Q9UKJ5 165 aa8.94□□□□□ -0.98
NF1-208ENST00000471572 LGR5O75473 907 aa8.93□□□□□ -0.98
NF1-208ENST00000471572 LYPD8Q6UX82 237 aa8.93□□□□□ -0.98
NF1-208ENST00000471572 ZSCAN29Q8IWY8 852 aaPredicted RBP8.93□□□□□ -0.98
NF1-208ENST00000471572 DESI1Q6ICB0 168 aa8.93□□□□□ -0.98
NF1-208ENST00000471572 RETREG3Q86VR2 466 aa8.93□□□□□ -0.98
NF1-208ENST00000471572 NT5DC4Q86YG4 428 aa8.93□□□□□ -0.98
NF1-208ENST00000471572 DNAAF2Q9NVR5 837 aaKnown RBP8.93□□□□□ -0.98
NF1-208ENST00000471572 ZBTB7BO15156 539 aaPredicted RBP8.92□□□□□ -0.98
NF1-208ENST00000471572 DHX38Q92620 1227 aaKnown RBP8.92□□□□□ -0.98
NF1-208ENST00000471572 FAM161BQ96MY7 647 aa8.92□□□□□ -0.98
NF1-208ENST00000471572 OCSTAMPQ9BR26 566 aa8.92□□□□□ -0.98
NF1-208ENST00000471572 ARSIQ5FYB1 569 aa8.92□□□□□ -0.98
NF1-208ENST00000471572 SIX5Q8N196 739 aa8.92□□□□□ -0.98
NF1-208ENST00000471572 EML3Q32P44 896 aa8.9□□□□□ -0.98
NF1-208ENST00000471572 NOP9Q86U38 636 aaKnown RBP8.9□□□□□ -0.98
NF1-208ENST00000471572 MKNK1Q9BUB5 465 aa8.9□□□□□ -0.98
NF1-208ENST00000471572 RNF19AQ9NV58 838 aa8.9□□□□□ -0.98
NF1-208ENST00000471572 MAP10Q9P2G4 905 aa8.9□□□□□ -0.98
NF1-208ENST00000471572 F12P00748 615 aaPredicted RBP8.9□□□□□ -0.99
NF1-208ENST00000471572 LARGE2Q8N3Y3 721 aa8.9□□□□□ -0.99
NF1-208ENST00000471572 PRKAG2Q9UGJ0 569 aa8.9□□□□□ -0.99
NF1-208ENST00000471572 FKBP4Q02790 459 aaKnown RBP eCLIP8.89□□□□□ -0.99
NF1-208ENST00000471572 GRIPAP1Q4V328 841 aa8.89□□□□□ -0.99
NF1-208ENST00000471572 PTPREP23469 700 aa8.88□□□□□ -0.99
NF1-208ENST00000471572 ATP6V1AP38606 617 aa8.88□□□□□ -0.99
NF1-208ENST00000471572 TMC7Q7Z402 723 aa8.88□□□□□ -0.99
NF1-208ENST00000471572 PURBQ96QR8 312 aaKnown RBP8.88□□□□□ -0.99
NF1-208ENST00000471572 SFI1A8K8P3 1242 aa8.88□□□□□ -0.99
NF1-208ENST00000471572 FMNL1O95466 1100 aaPredicted RBP8.88□□□□□ -0.99
NF1-208ENST00000471572 CFHP08603 1231 aa8.88□□□□□ -0.99
NF1-208ENST00000471572 CUEDC1Q9NWM3 386 aaPredicted RBP8.88□□□□□ -0.99
NF1-208ENST00000471572 LHX6Q9UPM6 363 aa8.88□□□□□ -0.99
NF1-208ENST00000471572 FANCCQ00597 558 aa8.87□□□□□ -0.99
NF1-208ENST00000471572 GPATCH3Q96I76 525 aa8.87□□□□□ -0.99
NF1-208ENST00000471572 SBNO2Q9Y2G9 1366 aa8.87□□□□□ -0.99
NF1-208ENST00000471572 ATP1A2P50993 1020 aa8.87□□□□□ -0.99
NF1-208ENST00000471572 SEC13P55735 322 aa8.87□□□□□ -0.99
NF1-208ENST00000471572 CCDC144BQ3MJ40 725 aa8.87□□□□□ -0.99
NF1-208ENST00000471572 TRIM50Q86XT4 487 aa8.87□□□□□ -0.99
NF1-208ENST00000471572 CERS3Q8IU89 383 aa8.87□□□□□ -0.99
NF1-208ENST00000471572 PIF1Q9H611 641 aa8.87□□□□□ -0.99
NF1-208ENST00000471572 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.87□□□□□ -0.99
NF1-208ENST00000471572 IQSEC3Q9UPP2 1182 aaPredicted RBP8.87□□□□□ -0.99
NF1-208ENST00000471572 EVX2Q03828 476 aa8.86□□□□□ -0.99
NF1-208ENST00000471572 MAP7D1Q3KQU3 841 aa8.86□□□□□ -0.99
NF1-208ENST00000471572 PPP4R3BQ5MIZ7 849 aa8.86□□□□□ -0.99
NF1-208ENST00000471572 TMEM87AQ8NBN3 555 aa8.86□□□□□ -0.99
NF1-208ENST00000471572 TMA7Q9Y2S6 64 aaKnown RBP8.86□□□□□ -0.99
NF1-208ENST00000471572 PCDHB9Q9Y5E1 797 aa8.86□□□□□ -0.99
NF1-208ENST00000471572 MARCH6O60337 910 aa8.85□□□□□ -0.99
NF1-208ENST00000471572 TNNI2P48788 182 aa8.85□□□□□ -0.99
NF1-208ENST00000471572 SF3B2Q13435 895 aaKnown RBP8.85□□□□□ -0.99
NF1-208ENST00000471572 FKBP5Q13451 457 aaPredicted RBP8.85□□□□□ -0.99
NF1-208ENST00000471572 NOD1Q9Y239 953 aa8.85□□□□□ -0.99
NF1-208ENST00000471572 TLDC2A0PJX2 215 aa8.85□□□□□ -0.99
NF1-208ENST00000471572 FMR1Q06787 632 aaKnown RBP eCLIP8.85□□□□□ -0.99
NF1-208ENST00000471572 GPR153Q6NV75 609 aa8.85□□□□□ -0.99
NF1-208ENST00000471572 NLGN1Q8N2Q7 840 aa8.85□□□□□ -0.99
NF1-208ENST00000471572 BCL11AQ9H165 835 aa8.85□□□□□ -0.99
NF1-208ENST00000471572 KIAA1468Q9P260 1216 aa8.85□□□□□ -0.99
NF1-208ENST00000471572 SLC27A5Q9Y2P5 690 aa8.85□□□□□ -0.99
NF1-208ENST00000471572 GTF2F1P35269 517 aaKnown RBP eCLIP8.84□□□□□ -0.99
NF1-208ENST00000471572 CCDC102BQ68D86 513 aa8.84□□□□□ -0.99
NF1-208ENST00000471572 TPCN2Q8NHX9 752 aa8.84□□□□□ -0.99
NF1-208ENST00000471572 GAS2L2Q8NHY3 880 aa8.84□□□□□ -0.99
NF1-208ENST00000471572 CCDC85AQ96PX6 553 aaPredicted RBP8.84□□□□□ -0.99
NF1-208ENST00000471572 RBCK1Q9BYM8 510 aa8.84□□□□□ -0.99
NF1-208ENST00000471572 ACBD3Q9H3P7 528 aa8.84□□□□□ -0.99
NF1-208ENST00000471572 CAPN10Q9HC96 672 aa8.84□□□□□ -0.99
NF1-208ENST00000471572 TBX22Q9Y458 520 aa8.84□□□□□ -0.99
NF1-208ENST00000471572 TREHO43280 583 aa8.83□□□□□ -1
NF1-208ENST00000471572 RAB11FIP3O75154 756 aa8.83□□□□□ -1
NF1-208ENST00000471572 GTF2IP78347 998 aa8.83□□□□□ -1
NF1-208ENST00000471572 PUS10Q3MIT2 529 aaKnown RBP8.83□□□□□ -1
NF1-208ENST00000471572 EGFLAMQ63HQ2 1017 aa8.83□□□□□ -1
NF1-208ENST00000471572 RNF19BQ6ZMZ0 732 aa8.83□□□□□ -1
NF1-208ENST00000471572 SLC43A3Q8NBI5 491 aa8.83□□□□□ -1
NF1-208ENST00000471572 TGIF2Q9GZN2 237 aa8.83□□□□□ -1
NF1-208ENST00000471572 PARP2Q9UGN5 583 aa8.83□□□□□ -1
NF1-208ENST00000471572 MORN1Q5T089 497 aa8.83□□□□□ -1
NF1-208ENST00000471572 ARID4BQ4LE39 1312 aaPredicted RBP8.82□□□□□ -1
NF1-208ENST00000471572 CLCN6P51797 869 aa8.82□□□□□ -1
NF1-208ENST00000471572 MICAL1Q8TDZ2 1067 aa8.82□□□□□ -1
NF1-208ENST00000471572 HOXB3P14651 431 aaPredicted RBP8.81□□□□□ -1
NF1-208ENST00000471572 ATP2B1P20020 1258 aa8.81□□□□□ -1
NF1-208ENST00000471572 WEE1P30291 646 aa8.81□□□□□ -1
NF1-208ENST00000471572 NOL8Q76FK4 1167 aaKnown RBP8.81□□□□□ -1
NF1-208ENST00000471572 SEPT9Q9UHD8 586 aaPredicted RBP8.81□□□□□ -1
NF1-208ENST00000471572 SDE2Q6IQ49 451 aa8.81□□□□□ -1
NF1-208ENST00000471572 DUSP9Q99956 384 aaKnown RBP8.81□□□□□ -1
NF1-208ENST00000471572 CCSER2Q9H7U1 834 aa8.81□□□□□ -1
NF1-208ENST00000471572 BRD2P25440 801 aaKnown RBP8.8□□□□□ -1
NF1-208ENST00000471572 NAA30Q147X3 362 aaPredicted RBP8.8□□□□□ -1
NF1-208ENST00000471572 BLOC1S3Q6QNY0 202 aa8.8□□□□□ -1
NF1-208ENST00000471572 DSC3Q14574 896 aa8.8□□□□□ -1
NF1-208ENST00000471572 OXLD1Q5BKU9 147 aa8.8□□□□□ -1
NF1-208ENST00000471572 TMC4Q7Z404 712 aa8.8□□□□□ -1
NF1-208ENST00000471572 HELQQ8TDG4 1101 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms