RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 FANCIQ9NVI1 1328 aa8.44□□□□□ -1.06
SPEN-204ENST00000471538 LTKP29376 864 aa8.44□□□□□ -1.06
SPEN-204ENST00000471538 SAFB2Q14151 953 aaKnown RBP eCLIP8.44□□□□□ -1.06
SPEN-204ENST00000471538 ARHGAP23Q9P227 1491 aa8.43□□□□□ -1.06
SPEN-204ENST00000471538 METP08581 1390 aa8.43□□□□□ -1.06
SPEN-204ENST00000471538 MTHFSP49914 203 aa8.43□□□□□ -1.06
SPEN-204ENST00000471538 HDGFP51858 240 aaKnown RBP8.43□□□□□ -1.06
SPEN-204ENST00000471538 SRPK2P78362 688 aaKnown RBP8.43□□□□□ -1.06
SPEN-204ENST00000471538 IFNL1Q8IU54 200 aa8.43□□□□□ -1.06
SPEN-204ENST00000471538 POGKQ9P215 609 aa8.43□□□□□ -1.06
SPEN-204ENST00000471538 ROBO1Q9Y6N7 1651 aa8.42□□□□□ -1.06
SPEN-204ENST00000471538 CDC42BPGQ6DT37 1551 aa8.42□□□□□ -1.06
SPEN-204ENST00000471538 E9PSI1 815 aa8.42□□□□□ -1.06
SPEN-204ENST00000471538 PLIN1O60240 522 aa8.42□□□□□ -1.06
SPEN-204ENST00000471538 NUBP1P53384 320 aa8.42□□□□□ -1.06
SPEN-204ENST00000471538 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.42□□□□□ -1.06
SPEN-204ENST00000471538 RUNDC1Q96C34 613 aa8.42□□□□□ -1.06
SPEN-204ENST00000471538 SIRT1Q96EB6 747 aa8.42□□□□□ -1.06
SPEN-204ENST00000471538 CRBNQ96SW2 442 aa8.42□□□□□ -1.06
SPEN-204ENST00000471538 CDK19Q9BWU1 502 aa8.42□□□□□ -1.06
SPEN-204ENST00000471538 SLIT1O75093 1534 aa8.42□□□□□ -1.06
SPEN-204ENST00000471538 CPSF1Q10570 1443 aaKnown RBP8.41□□□□□ -1.06
SPEN-204ENST00000471538 ADAMTS13Q76LX8 1427 aa8.41□□□□□ -1.06
SPEN-204ENST00000471538 PNPLA6Q8IY17 1366 aa8.41□□□□□ -1.06
SPEN-204ENST00000471538 TMEM2Q9UHN6 1383 aa8.41□□□□□ -1.06
SPEN-204ENST00000471538 MON2Q7Z3U7 1717 aa8.41□□□□□ -1.06
SPEN-204ENST00000471538 FYB1O15117 783 aa8.41□□□□□ -1.06
SPEN-204ENST00000471538 CCDC27Q2M243 656 aa8.41□□□□□ -1.06
SPEN-204ENST00000471538 C20orf194Q5TEA3 1177 aa8.41□□□□□ -1.06
SPEN-204ENST00000471538 WWC1Q8IX03 1113 aa8.41□□□□□ -1.06
SPEN-204ENST00000471538 TERF2IPQ9NYB0 399 aa8.41□□□□□ -1.06
SPEN-204ENST00000471538 TNNT2P45379 298 aaPredicted RBP8.4□□□□□ -1.06
SPEN-204ENST00000471538 WAPLQ7Z5K2 1190 aa8.4□□□□□ -1.06
SPEN-204ENST00000471538 RBM33Q96EV2 1170 aaKnown RBP8.4□□□□□ -1.06
SPEN-204ENST00000471538 CFAP53Q96M91 514 aa8.4□□□□□ -1.06
SPEN-204ENST00000471538 AKAP12Q02952 1782 aa8.4□□□□□ -1.06
SPEN-204ENST00000471538 PLCG2P16885 1265 aa8.39□□□□□ -1.07
SPEN-204ENST00000471538 TMEM106CQ9BVX2 250 aa8.39□□□□□ -1.07
SPEN-204ENST00000471538 ZBTB47Q9UFB7 747 aaPredicted RBP8.39□□□□□ -1.07
SPEN-204ENST00000471538 TOPAZ1Q8N9V7 1692 aa8.39□□□□□ -1.07
SPEN-204ENST00000471538 TMEM94Q12767 1356 aa8.39□□□□□ -1.07
SPEN-204ENST00000471538 KDM2BQ8NHM5 1336 aa8.39□□□□□ -1.07
SPEN-204ENST00000471538 HDGFL2Q7Z4V5 671 aaPredicted RBP8.38□□□□□ -1.07
SPEN-204ENST00000471538 WDR63Q8IWG1 891 aa8.38□□□□□ -1.07
SPEN-204ENST00000471538 TCP11L2Q8N4U5 519 aa8.38□□□□□ -1.07
SPEN-204ENST00000471538 UPF1Q92900 1129 aaKnown RBP eCLIP8.38□□□□□ -1.074e-7■■■□□ 15.4
SPEN-204ENST00000471538 PLEKHF1Q96S99 279 aa8.38□□□□□ -1.07
SPEN-204ENST00000471538 GGNBP2Q9H3C7 697 aa8.38□□□□□ -1.07
SPEN-204ENST00000471538 CABP1Q9NZU7 370 aa8.38□□□□□ -1.07
SPEN-204ENST00000471538 EID1Q9Y6B2 187 aa8.38□□□□□ -1.07
SPEN-204ENST00000471538 LRP6O75581 1613 aa8.38□□□□□ -1.07
SPEN-204ENST00000471538 EDC4Q6P2E9 1401 aaKnown RBP8.38□□□□□ -1.07
SPEN-204ENST00000471538 NRKQ7Z2Y5 1582 aa8.38□□□□□ -1.07
SPEN-204ENST00000471538 PLEKHG1Q9ULL1 1385 aa8.38□□□□□ -1.07
SPEN-204ENST00000471538 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.38□□□□□ -1.07
SPEN-204ENST00000471538 WASLO00401 505 aaPredicted RBP8.37□□□□□ -1.07
SPEN-204ENST00000471538 TXNDC2Q86VQ3 553 aa8.37□□□□□ -1.07
SPEN-204ENST00000471538 PPIP5K1Q6PFW1 1433 aa8.37□□□□□ -1.07
SPEN-204ENST00000471538 PHLPP1O60346 1717 aa8.37□□□□□ -1.07
SPEN-204ENST00000471538 ITSN1Q15811 1721 aa8.37□□□□□ -1.07
SPEN-204ENST00000471538 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.37□□□□□ -1.07
SPEN-204ENST00000471538 MARVELD3Q96A59 401 aa8.37□□□□□ -1.07
SPEN-204ENST00000471538 ROBO2Q9HCK4 1378 aa8.36□□□□□ -1.07
SPEN-204ENST00000471538 COL16A1Q07092 1604 aaPredicted RBP8.36□□□□□ -1.07
SPEN-204ENST00000471538 TCERG1O14776 1098 aaKnown RBP8.36□□□□□ -1.07
SPEN-204ENST00000471538 BCAR3O75815 825 aa8.36□□□□□ -1.07
SPEN-204ENST00000471538 RRP7AQ9Y3A4 280 aaKnown RBP8.36□□□□□ -1.07
SPEN-204ENST00000471538 NWD1Q149M9 1564 aa8.35□□□□□ -1.07
SPEN-204ENST00000471538 PTPRUQ92729 1446 aa8.35□□□□□ -1.07
SPEN-204ENST00000471538 SNPHO15079 494 aa8.35□□□□□ -1.07
SPEN-204ENST00000471538 U2AF1L5P0DN76 240 aaPredicted RBP8.35□□□□□ -1.07
SPEN-204ENST00000471538 MS4A1P11836 297 aa8.35□□□□□ -1.07
SPEN-204ENST00000471538 U2AF1Q01081 240 aaKnown RBP eCLIP8.35□□□□□ -1.07
SPEN-204ENST00000471538 FAM212AQ96EL1 285 aa8.35□□□□□ -1.07
SPEN-204ENST00000471538 OCEL1Q9H607 264 aa8.35□□□□□ -1.07
SPEN-204ENST00000471538 AATKQ6ZMQ8 1374 aa8.35□□□□□ -1.07
SPEN-204ENST00000471538 CDK12Q9NYV4 1490 aaPredicted RBP8.35□□□□□ -1.07
SPEN-204ENST00000471538 MAP2P11137 1827 aaKnown RBP8.34□□□□□ -1.07
SPEN-204ENST00000471538 DIP2AQ14689 1571 aa8.34□□□□□ -1.07
SPEN-204ENST00000471538 PRR36Q9H6K5 1346 aa8.34□□□□□ -1.07
SPEN-204ENST00000471538 KCNA6P17658 529 aa8.34□□□□□ -1.07
SPEN-204ENST00000471538 PDE3AQ14432 1141 aa8.34□□□□□ -1.07
SPEN-204ENST00000471538 ANP32EQ9BTT0 268 aa8.34□□□□□ -1.07
SPEN-204ENST00000471538 PTCH1Q13635 1447 aa8.33□□□□□ -1.08
SPEN-204ENST00000471538 NALCNQ8IZF0 1738 aa8.33□□□□□ -1.08
SPEN-204ENST00000471538 XRN1Q8IZH2 1706 aaKnown RBP8.33□□□□□ -1.08
SPEN-204ENST00000471538 DIAPH1O60610 1272 aaKnown RBP8.33□□□□□ -1.08
SPEN-204ENST00000471538 TMPOP42166 694 aaKnown RBP8.33□□□□□ -1.08
SPEN-204ENST00000471538 RARSP54136 660 aaKnown RBP8.33□□□□□ -1.08
SPEN-204ENST00000471538 CENPQQ7L2Z9 268 aaPredicted RBP8.33□□□□□ -1.08
SPEN-204ENST00000471538 NUDT16Q96DE0 195 aaKnown RBP8.33□□□□□ -1.08
SPEN-204ENST00000471538 SLC26A8Q96RN1 970 aa8.33□□□□□ -1.08
SPEN-204ENST00000471538 KRTAP3-3Q9BYR6 98 aa8.33□□□□□ -1.08
SPEN-204ENST00000471538 KRTAP3-2Q9BYR7 98 aa8.33□□□□□ -1.08
SPEN-204ENST00000471538 POLKQ9UBT6 870 aa8.33□□□□□ -1.08
SPEN-204ENST00000471538 JCADQ9P266 1359 aa8.33□□□□□ -1.08
SPEN-204ENST00000471538 NEUROD2Q15784 382 aa8.32□□□□□ -1.08
SPEN-204ENST00000471538 PROSER2Q86WR7 435 aaPredicted RBP8.32□□□□□ -1.08
SPEN-204ENST00000471538 IL16Q14005 1332 aa8.32□□□□□ -1.08
SPEN-204ENST00000471538 POTEB3A0JP26 581 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms