RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 GPBP1L1Q9HC44 474 aaPredicted RBP5.18□□□□□ -1.58
COMMD3-209ENST00000471350 MAGEB6P1A0A0J9YX57 407 aa5.17□□□□□ -1.58
COMMD3-209ENST00000471350 MAN1A2O60476 641 aa5.17□□□□□ -1.58
COMMD3-209ENST00000471350 BMP2P12643 396 aa5.17□□□□□ -1.58
COMMD3-209ENST00000471350 CBLBQ13191 982 aa5.17□□□□□ -1.58
COMMD3-209ENST00000471350 SH3D19Q5HYK7 790 aa5.17□□□□□ -1.58
COMMD3-209ENST00000471350 PDXDC2PQ6P474 469 aa5.17□□□□□ -1.58
COMMD3-209ENST00000471350 EPS8L1Q8TE68 723 aa5.17□□□□□ -1.58
COMMD3-209ENST00000471350 FAM117AQ9C073 453 aa5.17□□□□□ -1.58
COMMD3-209ENST00000471350 SPINT1O43278 529 aa5.16□□□□□ -1.58
COMMD3-209ENST00000471350 NR6A1Q15406 480 aa5.16□□□□□ -1.58
COMMD3-209ENST00000471350 SKIV2LQ15477 1246 aaKnown RBP5.16□□□□□ -1.58
COMMD3-209ENST00000471350 KDF1Q8NAX2 398 aaPredicted RBP5.16□□□□□ -1.58
COMMD3-209ENST00000471350 TSEN34Q9BSV6 310 aaKnown RBP5.16□□□□□ -1.58
COMMD3-209ENST00000471350 CARD14Q9BXL6 1004 aa5.16□□□□□ -1.58
COMMD3-209ENST00000471350 RSPH6AQ9H0K4 717 aa5.16□□□□□ -1.58
COMMD3-209ENST00000471350 HMX1Q9NP08 348 aaPredicted RBP5.16□□□□□ -1.58
COMMD3-209ENST00000471350 FKBPLQ9UIM3 349 aa5.16□□□□□ -1.58
COMMD3-209ENST00000471350 EMILIN1Q9Y6C2 1016 aa5.16□□□□□ -1.58
COMMD3-209ENST00000471350 PTSQ03393 145 aa5.15□□□□□ -1.59
COMMD3-209ENST00000471350 INTS6LQ5JSJ4 861 aaKnown RBP5.15□□□□□ -1.59
COMMD3-209ENST00000471350 RNFT1Q5M7Z0 435 aa5.14□□□□□ -1.59
COMMD3-209ENST00000471350 NANOS1Q8WY41 292 aaKnown RBP5.14□□□□□ -1.59
COMMD3-209ENST00000471350 KCTD15Q96SI1 283 aaPredicted RBP5.14□□□□□ -1.59
COMMD3-209ENST00000471350 KDM4CQ9H3R0 1056 aa5.14□□□□□ -1.59
COMMD3-209ENST00000471350 SENP3-EIF4A1A0A087X0R7 540 aa5.13□□□□□ -1.59
COMMD3-209ENST00000471350 SLC35F4A4IF30 521 aa5.13□□□□□ -1.59
COMMD3-209ENST00000471350 FAM181BA6NEQ2 426 aa5.13□□□□□ -1.59
COMMD3-209ENST00000471350 TTLL8A6PVC2 850 aa5.13□□□□□ -1.59
COMMD3-209ENST00000471350 CTSOP43234 321 aaPredicted RBP5.13□□□□□ -1.59
COMMD3-209ENST00000471350 ARHGAP9Q9BRR9 750 aa5.13□□□□□ -1.59
COMMD3-209ENST00000471350 ZC3H4Q9UPT8 1303 aaKnown RBP5.13□□□□□ -1.59
COMMD3-209ENST00000471350 ESPNB1AK53 854 aa5.12□□□□□ -1.59
COMMD3-209ENST00000471350 LILRA1O75019 489 aa5.12□□□□□ -1.59
COMMD3-209ENST00000471350 ADD1P35611 737 aaKnown RBP5.12□□□□□ -1.59
COMMD3-209ENST00000471350 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.12□□□□□ -1.59
COMMD3-209ENST00000471350 ADAM32Q8TC27 787 aa5.12□□□□□ -1.59
COMMD3-209ENST00000471350 AGBL1Q96MI9 1066 aa5.12□□□□□ -1.59
COMMD3-209ENST00000471350 TMPRSS4Q9NRS4 437 aa5.12□□□□□ -1.59
COMMD3-209ENST00000471350 FIGNL2A6NMB9 653 aa5.11□□□□□ -1.59
COMMD3-209ENST00000471350 UPP2O95045 317 aa5.11□□□□□ -1.59
COMMD3-209ENST00000471350 KCNMA1Q12791 1236 aa5.11□□□□□ -1.59
COMMD3-209ENST00000471350 CCDC155Q8N6L0 562 aa5.11□□□□□ -1.59
COMMD3-209ENST00000471350 RNF217Q8TC41 542 aa5.11□□□□□ -1.59
COMMD3-209ENST00000471350 TRIM34Q9BYJ4 488 aa5.11□□□□□ -1.59
COMMD3-209ENST00000471350 CDV3Q9UKY7 258 aaKnown RBP5.11□□□□□ -1.59
COMMD3-209ENST00000471350 GPSM3Q9Y4H4 160 aa5.11□□□□□ -1.59
COMMD3-209ENST00000471350 FOXD4L5Q5VV16 416 aaPredicted RBP5.1□□□□□ -1.59
COMMD3-209ENST00000471350 SLC10A4Q96EP9 437 aa5.1□□□□□ -1.59
COMMD3-209ENST00000471350 INSM2Q96T92 566 aaPredicted RBP5.1□□□□□ -1.59
COMMD3-209ENST00000471350 COL25A1Q9BXS0 654 aaPredicted RBP5.1□□□□□ -1.59
COMMD3-209ENST00000471350 PGPEP1Q9NXJ5 209 aa5.1□□□□□ -1.59
COMMD3-209ENST00000471350 GPR37L1O60883 481 aa5.09□□□□□ -1.59
COMMD3-209ENST00000471350 USP17L8P0C7I0 530 aa5.09□□□□□ -1.59
COMMD3-209ENST00000471350 SLURP2P0DP57 97 aa5.09□□□□□ -1.59
COMMD3-209ENST00000471350 ZNF385CQ66K41 422 aaPredicted RBP5.09□□□□□ -1.59
COMMD3-209ENST00000471350 ZNF784Q8NCA9 323 aaPredicted RBP5.09□□□□□ -1.59
COMMD3-209ENST00000471350 WHAMMQ8TF30 809 aa5.09□□□□□ -1.59
COMMD3-209ENST00000471350 CNTNAP3BQ96NU0 1288 aa5.09□□□□□ -1.59
COMMD3-209ENST00000471350 CNTNAP3Q9BZ76 1288 aa5.09□□□□□ -1.59
COMMD3-209ENST00000471350 ERVH48-1M5A8F1 160 aa5.08□□□□□ -1.6
COMMD3-209ENST00000471350 AP1G2O75843 785 aa5.08□□□□□ -1.6
COMMD3-209ENST00000471350 ARHGEF15O94989 841 aa5.08□□□□□ -1.6
COMMD3-209ENST00000471350 ITGA6P23229 1130 aa5.08□□□□□ -1.6
COMMD3-209ENST00000471350 RFC5P40937 340 aa5.08□□□□□ -1.6
COMMD3-209ENST00000471350 RELBQ01201 579 aa5.08□□□□□ -1.6
COMMD3-209ENST00000471350 PTK2Q05397 1052 aa5.08□□□□□ -1.6
COMMD3-209ENST00000471350 DHX9Q08211 1270 aaKnown RBP5.08□□□□□ -1.6
COMMD3-209ENST00000471350 ZBTB33Q86T24 672 aa5.08□□□□□ -1.6
COMMD3-209ENST00000471350 DDRGK1Q96HY6 314 aa5.08□□□□□ -1.6
COMMD3-209ENST00000471350 GJD4Q96KN9 370 aaPredicted RBP5.08□□□□□ -1.6
COMMD3-209ENST00000471350 CUEDC1Q9NWM3 386 aaPredicted RBP5.08□□□□□ -1.6
COMMD3-209ENST00000471350 ADH1AP07327 375 aa5.07□□□□□ -1.6
COMMD3-209ENST00000471350 ZNF395Q9H8N7 513 aaPredicted RBP5.07□□□□□ -1.6
COMMD3-209ENST00000471350 ADAMTS8Q9UP79 889 aa5.07□□□□□ -1.6
COMMD3-209ENST00000471350 GAS6Q14393 721 aa5.06□□□□□ -1.6
COMMD3-209ENST00000471350 VWA5B2Q8N398 1253 aa5.06□□□□□ -1.6
COMMD3-209ENST00000471350 PTGIRP43119 386 aa5.05□□□□□ -1.6
COMMD3-209ENST00000471350 NBPF20Q3BBV1 942 aa5.05□□□□□ -1.6
COMMD3-209ENST00000471350 BCANQ96GW7 911 aa5.05□□□□□ -1.6
COMMD3-209ENST00000471350 KCTD17Q8N5Z5 321 aa5.04□□□□□ -1.6
COMMD3-209ENST00000471350 GOPCQ9HD26 462 aa5.04□□□□□ -1.6
COMMD3-209ENST00000471350 FBXO45P0C2W1 286 aa5.03□□□□□ -1.6
COMMD3-209ENST00000471350 RAB15P59190 212 aa5.03□□□□□ -1.6
COMMD3-209ENST00000471350 RASSF7Q02833 373 aa5.03□□□□□ -1.6
COMMD3-209ENST00000471350 SEPT12Q8IYM1 358 aa5.03□□□□□ -1.6
COMMD3-209ENST00000471350 POLMQ9NP87 494 aaPredicted RBP5.03□□□□□ -1.6
COMMD3-209ENST00000471350 GIGYF1O75420 1035 aaPredicted RBP5.02□□□□□ -1.61
COMMD3-209ENST00000471350 RNF144AP50876 292 aaPredicted RBP5.02□□□□□ -1.61
COMMD3-209ENST00000471350 LYPD4Q6UWN0 246 aa5.02□□□□□ -1.61
COMMD3-209ENST00000471350 SV2AQ7L0J3 742 aa5.02□□□□□ -1.61
COMMD3-209ENST00000471350 DZIP3Q86Y13 1208 aaKnown RBP5.02□□□□□ -1.61
COMMD3-209ENST00000471350 CYLDQ9NQC7 956 aa5.02□□□□□ -1.61
COMMD3-209ENST00000471350 ATP1B4Q9UN42 357 aaPredicted RBP5.02□□□□□ -1.61
COMMD3-209ENST00000471350 THBS1P07996 1170 aa5.01□□□□□ -1.61
COMMD3-209ENST00000471350 SCTRP47872 440 aa5.01□□□□□ -1.61
COMMD3-209ENST00000471350 ERVK-9P63128 1117 aa5.01□□□□□ -1.61
COMMD3-209ENST00000471350 SUZ12Q15022 739 aaKnown RBP5.01□□□□□ -1.61
COMMD3-209ENST00000471350 ZNF837Q96EG3 531 aaPredicted RBP5.01□□□□□ -1.61
COMMD3-209ENST00000471350 CDC14CA4D256 554 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms