RNA–Protein interactions for RNA: ENST00000470672.1

IMP4-212, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-212ENST00000470672 RGPD5Q99666 1765 aa26.68■■□□□ 1.86
IMP4-212ENST00000470672 KNSTRNQ9Y448 316 aa26.66■■□□□ 1.86
IMP4-212ENST00000470672 PER1O15534 1290 aaPredicted RBP26.65■■□□□ 1.86
IMP4-212ENST00000470672 ZBTB7CA1YPR0 619 aa26.63■■□□□ 1.85
IMP4-212ENST00000470672 AXIN2Q9Y2T1 843 aa26.63■■□□□ 1.85
IMP4-212ENST00000470672 SPATA31A5Q5VU36 1347 aa26.63■■□□□ 1.85
IMP4-212ENST00000470672 SPATA31A7Q8IWB4 1347 aa26.63■■□□□ 1.85
IMP4-212ENST00000470672 AMER1Q5JTC6 1135 aaPredicted RBP26.62■■□□□ 1.85
IMP4-212ENST00000470672 BLMP54132 1417 aaPredicted RBP26.62■■□□□ 1.85
IMP4-212ENST00000470672 MAP3K19Q56UN5 1328 aa26.62■■□□□ 1.85
IMP4-212ENST00000470672 RTL1A6NKG5 1358 aa26.61■■□□□ 1.85
IMP4-212ENST00000470672 KIF24Q5T7B8 1368 aa26.61■■□□□ 1.85
IMP4-212ENST00000470672 EVA1CP58658 441 aa26.61■■□□□ 1.85
IMP4-212ENST00000470672 RGS12O14924 1447 aa26.61■■□□□ 1.85
IMP4-212ENST00000470672 NPC1L1Q9UHC9 1359 aa26.6■■□□□ 1.85
IMP4-212ENST00000470672 STRN4Q9NRL3 753 aa26.6■■□□□ 1.85
IMP4-212ENST00000470672 IP6K1Q92551 441 aa26.59■■□□□ 1.85
IMP4-212ENST00000470672 CCDC9Q9Y3X0 531 aaKnown RBP26.59■■□□□ 1.85
IMP4-212ENST00000470672 MAP2P11137 1827 aaKnown RBP26.59■■□□□ 1.85
IMP4-212ENST00000470672 SPATA31A1Q5TZJ5 1347 aa26.59■■□□□ 1.85
IMP4-212ENST00000470672 WDR17Q8IZU2 1322 aa26.59■■□□□ 1.85
IMP4-212ENST00000470672 CRB1P82279 1406 aa26.58■■□□□ 1.85
IMP4-212ENST00000470672 ONECUT3O60422 494 aaPredicted RBP26.58■■□□□ 1.85
IMP4-212ENST00000470672 FBLN1P23142 703 aa26.57■■□□□ 1.84
IMP4-212ENST00000470672 LARP1Q6PKG0 1096 aaKnown RBP26.57■■□□□ 1.84
IMP4-212ENST00000470672 ERBB3P21860 1342 aa26.56■■□□□ 1.84
IMP4-212ENST00000470672 FAM208AQ9UK61 1670 aaKnown RBP26.56■■□□□ 1.84
IMP4-212ENST00000470672 PEAK1Q9H792 1746 aa26.56■■□□□ 1.84
IMP4-212ENST00000470672 RRS1Q15050 365 aaKnown RBP26.55■■□□□ 1.84
IMP4-212ENST00000470672 THSD7AQ9UPZ6 1657 aa26.54■■□□□ 1.84
IMP4-212ENST00000470672 HOXC9P31274 260 aa26.54■■□□□ 1.84
IMP4-212ENST00000470672 AMPHP49418 695 aa26.54■■□□□ 1.84
IMP4-212ENST00000470672 THRAP3Q9Y2W1 955 aaKnown RBP26.53■■□□□ 1.84
IMP4-212ENST00000470672 FLT4P35916 1363 aa26.53■■□□□ 1.84
IMP4-212ENST00000470672 BARGINQ6ZT62 677 aa26.52■■□□□ 1.84
IMP4-212ENST00000470672 WNK3Q9BYP7 1800 aa26.51■■□□□ 1.83
IMP4-212ENST00000470672 SMG6Q86US8 1419 aaKnown RBP26.5■■□□□ 1.83
IMP4-212ENST00000470672 INSRP06213 1382 aa26.5■■□□□ 1.83
IMP4-212ENST00000470672 TOM1L2Q6ZVM7 507 aa26.5■■□□□ 1.83
IMP4-212ENST00000470672 MORC1Q86VD1 984 aa26.5■■□□□ 1.83
IMP4-212ENST00000470672 TCP11L2Q8N4U5 519 aa26.5■■□□□ 1.83
IMP4-212ENST00000470672 CARD10Q9BWT7 1032 aa26.5■■□□□ 1.83
IMP4-212ENST00000470672 BRWD3Q6RI45 1802 aa26.5■■□□□ 1.83
IMP4-212ENST00000470672 FAM98CQ17RN3 349 aaKnown RBP26.49■■□□□ 1.83
IMP4-212ENST00000470672 ANKRD24Q8TF21 1146 aa26.49■■□□□ 1.83
IMP4-212ENST00000470672 CSB-PGBD3P0DP91 1061 aa26.48■■□□□ 1.83
IMP4-212ENST00000470672 POLKQ9UBT6 870 aa26.48■■□□□ 1.83
IMP4-212ENST00000470672 EMILIN1Q9Y6C2 1016 aa26.48■■□□□ 1.83
IMP4-212ENST00000470672 SEPT12Q8IYM1 358 aa26.47■■□□□ 1.83
IMP4-212ENST00000470672 PARP4Q9UKK3 1724 aaKnown RBP26.47■■□□□ 1.83
IMP4-212ENST00000470672 USP35Q9P2H5 1018 aa26.46■■□□□ 1.83
IMP4-212ENST00000470672 TNNT2P45379 298 aaPredicted RBP26.44■■□□□ 1.82
IMP4-212ENST00000470672 HSP90AB2PQ58FF8 381 aa26.43■■□□□ 1.82
IMP4-212ENST00000470672 CC2D1BQ5T0F9 858 aaKnown RBP26.43■■□□□ 1.82
IMP4-212ENST00000470672 RGPD2P0DJD1 1756 aa26.43■■□□□ 1.82
IMP4-212ENST00000470672 DISP2A7MBM2 1401 aa26.42■■□□□ 1.82
IMP4-212ENST00000470672 SOCS7O14512 581 aa26.42■■□□□ 1.82
IMP4-212ENST00000470672 CDCA7Q9BWT1 371 aaPredicted RBP26.41■■□□□ 1.82
IMP4-212ENST00000470672 NLRP2Q9NX02 1062 aa26.41■■□□□ 1.82
IMP4-212ENST00000470672 LTV1Q96GA3 475 aaPredicted RBP26.39■■□□□ 1.82
IMP4-212ENST00000470672 A0A0G2JS52 829 aa26.38■■□□□ 1.81
IMP4-212ENST00000470672 PPM1GO15355 546 aaPredicted RBP26.38■■□□□ 1.81
IMP4-212ENST00000470672 MYT1Q01538 1121 aa26.38■■□□□ 1.81
IMP4-212ENST00000470672 LRRC37A3O60309 1634 aa26.38■■□□□ 1.81
IMP4-212ENST00000470672 KRT27Q7Z3Y8 459 aa26.37■■□□□ 1.81
IMP4-212ENST00000470672 DDX10Q13206 875 aaKnown RBP26.36■■□□□ 1.81
IMP4-212ENST00000470672 NCAPD2Q15021 1401 aa26.36■■□□□ 1.81
IMP4-212ENST00000470672 ZNF316A6NFI3 1004 aaPredicted RBP26.34■■□□□ 1.81
IMP4-212ENST00000470672 NBPF6Q5VWK0 638 aa26.32■■□□□ 1.8
IMP4-212ENST00000470672 NBPF4Q96M43 638 aa26.32■■□□□ 1.8
IMP4-212ENST00000470672 IL2RBP14784 551 aa26.31■■□□□ 1.8
IMP4-212ENST00000470672 MTHFSP49914 203 aa26.31■■□□□ 1.8
IMP4-212ENST00000470672 TNS2Q63HR2 1409 aa26.31■■□□□ 1.8
IMP4-212ENST00000470672 EIF4A2Q14240 407 aaKnown RBP26.3■■□□□ 1.8
IMP4-212ENST00000470672 DDB1Q16531 1140 aa26.3■■□□□ 1.8
IMP4-212ENST00000470672 EP400Q96L91 3159 aa26.3■■□□□ 1.8
IMP4-212ENST00000470672 PARD3Q8TEW0 1356 aa26.3■■□□□ 1.8
IMP4-212ENST00000470672 PDE3BQ13370 1112 aa26.28■■□□□ 1.8
IMP4-212ENST00000470672 RGPD1P0DJD0 1748 aa26.27■■□□□ 1.8
IMP4-212ENST00000470672 MEGF6O75095 1541 aa26.26■■□□□ 1.79
IMP4-212ENST00000470672 CNGB1Q14028 1251 aaPredicted RBP26.26■■□□□ 1.79
IMP4-212ENST00000470672 EYA1Q99502 592 aa26.26■■□□□ 1.79
IMP4-212ENST00000470672 OVOS2A0A0G2JMS6 1433 aa26.25■■□□□ 1.79
IMP4-212ENST00000470672 EXOC5O00471 708 aa26.25■■□□□ 1.79
IMP4-212ENST00000470672 UPF1Q92900 1129 aaKnown RBP eCLIP26.25■■□□□ 1.79
IMP4-212ENST00000470672 COL3A1P02461 1466 aaPredicted RBP26.24■■□□□ 1.79
IMP4-212ENST00000470672 PLEKHG2Q9H7P9 1386 aa26.24■■□□□ 1.79
IMP4-212ENST00000470672 IGSF1Q8N6C5 1336 aa26.24■■□□□ 1.79
IMP4-212ENST00000470672 BCL9O00512 1426 aa26.23■■□□□ 1.79
IMP4-212ENST00000470672 PPP2R1AP30153 589 aa26.23■■□□□ 1.79
IMP4-212ENST00000470672 USHBP1Q8N6Y0 703 aa26.23■■□□□ 1.79
IMP4-212ENST00000470672 SHANK3Q9BYB0 1731 aa26.22■■□□□ 1.79
IMP4-212ENST00000470672 IL13P35225 146 aa26.22■■□□□ 1.79
IMP4-212ENST00000470672 FAM196AQ6ZSG2 479 aa26.22■■□□□ 1.79
IMP4-212ENST00000470672 RAPGEF4Q8WZA2 1011 aa26.21■■□□□ 1.79
IMP4-212ENST00000470672 PKD1L3Q7Z443 1732 aa26.2■■□□□ 1.79
IMP4-212ENST00000470672 RALBP1Q15311 655 aa26.2■■□□□ 1.78
IMP4-212ENST00000470672 CCDC125Q86Z20 511 aa26.2■■□□□ 1.78
IMP4-212ENST00000470672 MARCH10Q8NA82 808 aaPredicted RBP26.19■■□□□ 1.78
IMP4-212ENST00000470672 SBF2Q86WG5 1849 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms