RNA–Protein interactions for RNA: ENST00000470199.2

LMNA-211, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-211ENST00000470199 LARP1Q6PKG0 1096 aaKnown RBP24.61■■□□□ 1.53
LMNA-211ENST00000470199 COL5A2P05997 1499 aaPredicted RBP24.6■■□□□ 1.53
LMNA-211ENST00000470199 CGNL1Q0VF96 1302 aa24.6■■□□□ 1.53
LMNA-211ENST00000470199 SPATA31A5Q5VU36 1347 aa24.6■■□□□ 1.53
LMNA-211ENST00000470199 SPATA31A7Q8IWB4 1347 aa24.6■■□□□ 1.53
LMNA-211ENST00000470199 RRS1Q15050 365 aaKnown RBP24.58■■□□□ 1.53
LMNA-211ENST00000470199 MAP3K19Q56UN5 1328 aa24.58■■□□□ 1.52
LMNA-211ENST00000470199 CDK12Q9NYV4 1490 aaPredicted RBP24.58■■□□□ 1.52
LMNA-211ENST00000470199 USP35Q9P2H5 1018 aa24.56■■□□□ 1.52
LMNA-211ENST00000470199 LTN1O94822 1766 aa24.56■■□□□ 1.52
LMNA-211ENST00000470199 RGPD5Q99666 1765 aa24.56■■□□□ 1.52
LMNA-211ENST00000470199 SPATA31A1Q5TZJ5 1347 aa24.56■■□□□ 1.52
LMNA-211ENST00000470199 PER1O15534 1290 aaPredicted RBP24.55■■□□□ 1.52
LMNA-211ENST00000470199 FAM98CQ17RN3 349 aaKnown RBP24.55■■□□□ 1.52
LMNA-211ENST00000470199 KNSTRNQ9Y448 316 aa24.53■■□□□ 1.52
LMNA-211ENST00000470199 ONECUT3O60422 494 aaPredicted RBP24.52■■□□□ 1.52
LMNA-211ENST00000470199 TNNT2P45379 298 aaPredicted RBP24.52■■□□□ 1.52
LMNA-211ENST00000470199 AMER1Q5JTC6 1135 aaPredicted RBP24.52■■□□□ 1.52
LMNA-211ENST00000470199 SEPT12Q8IYM1 358 aa24.52■■□□□ 1.52
LMNA-211ENST00000470199 IP6K1Q92551 441 aa24.52■■□□□ 1.52
LMNA-211ENST00000470199 SOCS7O14512 581 aa24.51■■□□□ 1.51
LMNA-211ENST00000470199 HOXC9P31274 260 aa24.5■■□□□ 1.51
LMNA-211ENST00000470199 AMPHP49418 695 aa24.5■■□□□ 1.51
LMNA-211ENST00000470199 EMILIN1Q9Y6C2 1016 aa24.5■■□□□ 1.51
LMNA-211ENST00000470199 WDR17Q8IZU2 1322 aa24.5■■□□□ 1.51
LMNA-211ENST00000470199 CSB-PGBD3P0DP91 1061 aa24.49■■□□□ 1.51
LMNA-211ENST00000470199 TOM1L2Q6ZVM7 507 aa24.49■■□□□ 1.51
LMNA-211ENST00000470199 LTV1Q96GA3 475 aaPredicted RBP24.49■■□□□ 1.51
LMNA-211ENST00000470199 CRB1P82279 1406 aa24.49■■□□□ 1.51
LMNA-211ENST00000470199 ABCC6O95255 1503 aa24.49■■□□□ 1.51
LMNA-211ENST00000470199 ANKRD24Q8TF21 1146 aa24.48■■□□□ 1.51
LMNA-211ENST00000470199 PEAK1Q9H792 1746 aa24.47■■□□□ 1.51
LMNA-211ENST00000470199 ERBB3P21860 1342 aa24.47■■□□□ 1.51
LMNA-211ENST00000470199 A0A0G2JS52 829 aa24.47■■□□□ 1.51
LMNA-211ENST00000470199 MYT1Q01538 1121 aa24.47■■□□□ 1.51
LMNA-211ENST00000470199 CNGB1Q14028 1251 aaPredicted RBP24.47■■□□□ 1.51
LMNA-211ENST00000470199 ANKRD26Q9UPS8 1709 aa24.47■■□□□ 1.51
LMNA-211ENST00000470199 TCP11L2Q8N4U5 519 aa24.46■■□□□ 1.51
LMNA-211ENST00000470199 NSD2O96028 1365 aa24.45■■□□□ 1.5
LMNA-211ENST00000470199 HSP90AB2PQ58FF8 381 aa24.45■■□□□ 1.5
LMNA-211ENST00000470199 CC2D1BQ5T0F9 858 aaKnown RBP24.45■■□□□ 1.5
LMNA-211ENST00000470199 MORC1Q86VD1 984 aa24.45■■□□□ 1.5
LMNA-211ENST00000470199 BLMP54132 1417 aaPredicted RBP24.44■■□□□ 1.5
LMNA-211ENST00000470199 POLKQ9UBT6 870 aa24.44■■□□□ 1.5
LMNA-211ENST00000470199 THSD7AQ9UPZ6 1657 aa24.43■■□□□ 1.5
LMNA-211ENST00000470199 BRWD3Q6RI45 1802 aa24.43■■□□□ 1.5
LMNA-211ENST00000470199 PPM1GO15355 546 aaPredicted RBP24.43■■□□□ 1.5
LMNA-211ENST00000470199 BARGINQ6ZT62 677 aa24.43■■□□□ 1.5
LMNA-211ENST00000470199 CARD10Q9BWT7 1032 aa24.43■■□□□ 1.5
LMNA-211ENST00000470199 NLRP2Q9NX02 1062 aa24.43■■□□□ 1.5
LMNA-211ENST00000470199 RTL1A6NKG5 1358 aa24.42■■□□□ 1.5
LMNA-211ENST00000470199 FAM182BQ5T319 152 aa24.4■■□□□ 1.5
LMNA-211ENST00000470199 THRAP3Q9Y2W1 955 aaKnown RBP24.4■■□□□ 1.5
LMNA-211ENST00000470199 FLT4P35916 1363 aa24.4■■□□□ 1.5
LMNA-211ENST00000470199 KRT27Q7Z3Y8 459 aa24.38■■□□□ 1.49
LMNA-211ENST00000470199 INSRP06213 1382 aa24.38■■□□□ 1.49
LMNA-211ENST00000470199 MAP2P11137 1827 aaKnown RBP24.38■■□□□ 1.49
LMNA-211ENST00000470199 KIF24Q5T7B8 1368 aa24.36■■□□□ 1.49
LMNA-211ENST00000470199 DDX10Q13206 875 aaKnown RBP24.35■■□□□ 1.49
LMNA-211ENST00000470199 NBPF6Q5VWK0 638 aa24.35■■□□□ 1.49
LMNA-211ENST00000470199 USHBP1Q8N6Y0 703 aa24.35■■□□□ 1.49
LMNA-211ENST00000470199 UPF1Q92900 1129 aaKnown RBP eCLIP24.35■■□□□ 1.49
LMNA-211ENST00000470199 NBPF4Q96M43 638 aa24.35■■□□□ 1.49
LMNA-211ENST00000470199 DISP2A7MBM2 1401 aa24.35■■□□□ 1.49
LMNA-211ENST00000470199 RGPD2P0DJD1 1756 aa24.34■■□□□ 1.49
LMNA-211ENST00000470199 NPC1L1Q9UHC9 1359 aa24.34■■□□□ 1.49
LMNA-211ENST00000470199 SMG6Q86US8 1419 aaKnown RBP24.32■■□□□ 1.48
LMNA-211ENST00000470199 WNK3Q9BYP7 1800 aa24.31■■□□□ 1.48
LMNA-211ENST00000470199 PARP4Q9UKK3 1724 aaKnown RBP24.3■■□□□ 1.48
LMNA-211ENST00000470199 FAM208AQ9UK61 1670 aaKnown RBP24.3■■□□□ 1.48
LMNA-211ENST00000470199 LRRC37A3O60309 1634 aa24.29■■□□□ 1.48
LMNA-211ENST00000470199 EIF4A2Q14240 407 aaKnown RBP24.29■■□□□ 1.48
LMNA-211ENST00000470199 IL2RBP14784 551 aa24.28■■□□□ 1.48
LMNA-211ENST00000470199 PDE3BQ13370 1112 aa24.28■■□□□ 1.48
LMNA-211ENST00000470199 DDB1Q16531 1140 aa24.28■■□□□ 1.48
LMNA-211ENST00000470199 MTHFSP49914 203 aa24.27■■□□□ 1.48
LMNA-211ENST00000470199 EYA1Q99502 592 aa24.26■■□□□ 1.47
LMNA-211ENST00000470199 CDCA7Q9BWT1 371 aaPredicted RBP24.26■■□□□ 1.47
LMNA-211ENST00000470199 EP400Q96L91 3159 aa24.26■■□□□ 1.47
LMNA-211ENST00000470199 MARCH10Q8NA82 808 aaPredicted RBP24.25■■□□□ 1.47
LMNA-211ENST00000470199 MEGF6O75095 1541 aa24.24■■□□□ 1.47
LMNA-211ENST00000470199 EXOC5O00471 708 aa24.23■■□□□ 1.47
LMNA-211ENST00000470199 ZNF316A6NFI3 1004 aaPredicted RBP24.22■■□□□ 1.47
LMNA-211ENST00000470199 TNS2Q63HR2 1409 aa24.21■■□□□ 1.47
LMNA-211ENST00000470199 NCAPD2Q15021 1401 aa24.19■■□□□ 1.46
LMNA-211ENST00000470199 PPP2R1AP30153 589 aa24.19■■□□□ 1.46
LMNA-211ENST00000470199 IL13P35225 146 aa24.19■■□□□ 1.46
LMNA-211ENST00000470199 FAM196AQ6ZSG2 479 aa24.18■■□□□ 1.46
LMNA-211ENST00000470199 TRIM37O94972 964 aa24.17■■□□□ 1.46
LMNA-211ENST00000470199 OVOS2A0A0G2JMS6 1433 aa24.17■■□□□ 1.46
LMNA-211ENST00000470199 IGSF1Q8N6C5 1336 aa24.16■■□□□ 1.46
LMNA-211ENST00000470199 DDX54Q8TDD1 881 aaKnown RBP24.16■■□□□ 1.46
LMNA-211ENST00000470199 RAPGEF4Q8WZA2 1011 aa24.16■■□□□ 1.46
LMNA-211ENST00000470199 PARD3Q8TEW0 1356 aa24.16■■□□□ 1.46
LMNA-211ENST00000470199 TATP17735 454 aaPredicted RBP24.15■■□□□ 1.46
LMNA-211ENST00000470199 PTF1AQ7RTS3 328 aa24.15■■□□□ 1.46
LMNA-211ENST00000470199 AEBP1Q8IUX7 1158 aa24.15■■□□□ 1.46
LMNA-211ENST00000470199 ZCRB1Q8TBF4 217 aaKnown RBP24.15■■□□□ 1.46
LMNA-211ENST00000470199 COL3A1P02461 1466 aaPredicted RBP24.14■■□□□ 1.46
LMNA-211ENST00000470199 DEFB132Q7Z7B7 95 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms