RNA–Protein interactions for RNA: ENST00000469988.3

RN7SL233P-201, Transcript of RNA, 7SL, cytoplasmic 233, pseudogene, humanhuman

BASIC

Gene RN7SL233P, Length 277 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL233P-201ENST00000469988 NPC1L1Q9UHC9 1359 aa10.22□□□□□ -0.77
RN7SL233P-201ENST00000469988 MAP2P11137 1827 aaKnown RBP10.21□□□□□ -0.77
RN7SL233P-201ENST00000469988 CHRNA2Q15822 529 aa10.21□□□□□ -0.77
RN7SL233P-201ENST00000469988 ARHGEF25Q86VW2 580 aa10.21□□□□□ -0.77
RN7SL233P-201ENST00000469988 UNC5CLQ8IV45 518 aa10.21□□□□□ -0.77
RN7SL233P-201ENST00000469988 CFAP53Q96M91 514 aa10.21□□□□□ -0.77
RN7SL233P-201ENST00000469988 USP21Q9UK80 565 aa10.21□□□□□ -0.77
RN7SL233P-201ENST00000469988 COL5A2P05997 1499 aaPredicted RBP10.21□□□□□ -0.78
RN7SL233P-201ENST00000469988 FAM208AQ9UK61 1670 aaKnown RBP10.21□□□□□ -0.78
RN7SL233P-201ENST00000469988 PEAK1Q9H792 1746 aa10.21□□□□□ -0.78
RN7SL233P-201ENST00000469988 RTL1A6NKG5 1358 aa10.2□□□□□ -0.78
RN7SL233P-201ENST00000469988 GLI3P10071 1580 aa10.19□□□□□ -0.78
RN7SL233P-201ENST00000469988 BLMP54132 1417 aaPredicted RBP10.19□□□□□ -0.78
RN7SL233P-201ENST00000469988 KIF24Q5T7B8 1368 aa10.19□□□□□ -0.78
RN7SL233P-201ENST00000469988 MAP3K19Q56UN5 1328 aa10.19□□□□□ -0.78
RN7SL233P-201ENST00000469988 EVA1CP58658 441 aa10.19□□□□□ -0.78
RN7SL233P-201ENST00000469988 BTG4Q9NY30 223 aa10.19□□□□□ -0.78
RN7SL233P-201ENST00000469988 TRPC5Q9UL62 973 aaPredicted RBP10.19□□□□□ -0.78
RN7SL233P-201ENST00000469988 WNK3Q9BYP7 1800 aa10.19□□□□□ -0.78
RN7SL233P-201ENST00000469988 CDK12Q9NYV4 1490 aaPredicted RBP10.18□□□□□ -0.78
RN7SL233P-201ENST00000469988 SMG6Q86US8 1419 aaKnown RBP10.18□□□□□ -0.78
RN7SL233P-201ENST00000469988 CSB-PGBD3P0DP91 1061 aa10.18□□□□□ -0.78
RN7SL233P-201ENST00000469988 VPS72Q15906 364 aa10.18□□□□□ -0.78
RN7SL233P-201ENST00000469988 POTEAQ6S8J7 498 aa10.18□□□□□ -0.78
RN7SL233P-201ENST00000469988 MYBBP1AQ9BQG0 1328 aaKnown RBP10.17□□□□□ -0.78
RN7SL233P-201ENST00000469988 FLT4P35916 1363 aa10.16□□□□□ -0.78
RN7SL233P-201ENST00000469988 ERBB3P21860 1342 aa10.16□□□□□ -0.78
RN7SL233P-201ENST00000469988 WDR17Q8IZU2 1322 aa10.16□□□□□ -0.78
RN7SL233P-201ENST00000469988 RBM6P78332 1123 aaKnown RBP10.16□□□□□ -0.78
RN7SL233P-201ENST00000469988 RRS1Q15050 365 aaKnown RBP10.16□□□□□ -0.78
RN7SL233P-201ENST00000469988 PRKRIP1Q9H875 184 aaPredicted RBP10.16□□□□□ -0.78
RN7SL233P-201ENST00000469988 QTRT2Q9H974 415 aaKnown RBP10.16□□□□□ -0.78
RN7SL233P-201ENST00000469988 NUDCQ9Y266 331 aa10.16□□□□□ -0.78
RN7SL233P-201ENST00000469988 AXIN2Q9Y2T1 843 aa10.16□□□□□ -0.78
RN7SL233P-201ENST00000469988 CCDC9Q9Y3X0 531 aaKnown RBP10.16□□□□□ -0.78
RN7SL233P-201ENST00000469988 CRB1P82279 1406 aa10.16□□□□□ -0.78
RN7SL233P-201ENST00000469988 THSD7AQ9UPZ6 1657 aa10.15□□□□□ -0.78
RN7SL233P-201ENST00000469988 SPATA31A5Q5VU36 1347 aa10.15□□□□□ -0.78
RN7SL233P-201ENST00000469988 SPATA31A7Q8IWB4 1347 aa10.15□□□□□ -0.78
RN7SL233P-201ENST00000469988 FBLN1P23142 703 aa10.15□□□□□ -0.78
RN7SL233P-201ENST00000469988 RXRBP28702 533 aa10.15□□□□□ -0.78
RN7SL233P-201ENST00000469988 MTHFSP49914 203 aa10.15□□□□□ -0.78
RN7SL233P-201ENST00000469988 IP6K1Q92551 441 aa10.15□□□□□ -0.78
RN7SL233P-201ENST00000469988 GJD4Q96KN9 370 aaPredicted RBP10.15□□□□□ -0.78
RN7SL233P-201ENST00000469988 STRN4Q9NRL3 753 aa10.15□□□□□ -0.78
RN7SL233P-201ENST00000469988 RGS12O14924 1447 aa10.15□□□□□ -0.79
RN7SL233P-201ENST00000469988 INSRP06213 1382 aa10.14□□□□□ -0.79
RN7SL233P-201ENST00000469988 RGPD2P0DJD1 1756 aa10.14□□□□□ -0.79
RN7SL233P-201ENST00000469988 NEFMP07197 916 aa10.14□□□□□ -0.79
RN7SL233P-201ENST00000469988 PPP2R1AP30153 589 aa10.14□□□□□ -0.79
RN7SL233P-201ENST00000469988 HOXC9P31274 260 aa10.14□□□□□ -0.79
RN7SL233P-201ENST00000469988 LARP1Q6PKG0 1096 aaKnown RBP10.14□□□□□ -0.79
RN7SL233P-201ENST00000469988 LTV1Q96GA3 475 aaPredicted RBP10.14□□□□□ -0.79
RN7SL233P-201ENST00000469988 POLKQ9UBT6 870 aa10.14□□□□□ -0.79
RN7SL233P-201ENST00000469988 EMILIN1Q9Y6C2 1016 aa10.14□□□□□ -0.79
RN7SL233P-201ENST00000469988 PARD3Q8TEW0 1356 aa10.14□□□□□ -0.79
RN7SL233P-201ENST00000469988 PARP4Q9UKK3 1724 aaKnown RBP10.13□□□□□ -0.79
RN7SL233P-201ENST00000469988 SPATA31A1Q5TZJ5 1347 aa10.13□□□□□ -0.79
RN7SL233P-201ENST00000469988 BRWD3Q6RI45 1802 aa10.13□□□□□ -0.79
RN7SL233P-201ENST00000469988 DIAPH1O60610 1272 aaKnown RBP10.12□□□□□ -0.79
RN7SL233P-201ENST00000469988 WDR43Q15061 677 aaKnown RBP eCLIP10.12□□□□□ -0.79
RN7SL233P-201ENST00000469988 TOM1L2Q6ZVM7 507 aa10.12□□□□□ -0.79
RN7SL233P-201ENST00000469988 ANKRD24Q8TF21 1146 aa10.12□□□□□ -0.79
RN7SL233P-201ENST00000469988 MRS2Q9HD23 443 aa10.12□□□□□ -0.79
RN7SL233P-201ENST00000469988 NLRP2Q9NX02 1062 aa10.12□□□□□ -0.79
RN7SL233P-201ENST00000469988 LRRC37A3O60309 1634 aa10.11□□□□□ -0.79
RN7SL233P-201ENST00000469988 NCAPD2Q15021 1401 aa10.11□□□□□ -0.79
RN7SL233P-201ENST00000469988 U2SURPO15042 1029 aaKnown RBP10.11□□□□□ -0.79
RN7SL233P-201ENST00000469988 HSP90AB2PQ58FF8 381 aa10.11□□□□□ -0.79
RN7SL233P-201ENST00000469988 TCP11L2Q8N4U5 519 aa10.11□□□□□ -0.79
RN7SL233P-201ENST00000469988 CARD10Q9BWT7 1032 aa10.11□□□□□ -0.79
RN7SL233P-201ENST00000469988 THRAP3Q9Y2W1 955 aaKnown RBP10.11□□□□□ -0.79
RN7SL233P-201ENST00000469988 RGPD1P0DJD0 1748 aa10.1□□□□□ -0.79
RN7SL233P-201ENST00000469988 DISP2A7MBM2 1401 aa10.1□□□□□ -0.79
RN7SL233P-201ENST00000469988 A0A0G2JS52 829 aa10.1□□□□□ -0.79
RN7SL233P-201ENST00000469988 ONECUT3O60422 494 aaPredicted RBP10.1□□□□□ -0.79
RN7SL233P-201ENST00000469988 MYT1Q01538 1121 aa10.1□□□□□ -0.79
RN7SL233P-201ENST00000469988 BARGINQ6ZT62 677 aa10.1□□□□□ -0.79
RN7SL233P-201ENST00000469988 PNNQ9H307 717 aaKnown RBP10.1□□□□□ -0.79
RN7SL233P-201ENST00000469988 FAM98CQ17RN3 349 aaKnown RBP10.09□□□□□ -0.79
RN7SL233P-201ENST00000469988 ILDR2Q71H61 639 aa10.09□□□□□ -0.79
RN7SL233P-201ENST00000469988 USP35Q9P2H5 1018 aa10.09□□□□□ -0.79
RN7SL233P-201ENST00000469988 COL3A1P02461 1466 aaPredicted RBP10.09□□□□□ -0.79
RN7SL233P-201ENST00000469988 U2AF1L5P0DN76 240 aaPredicted RBP10.08□□□□□ -0.8
RN7SL233P-201ENST00000469988 U2AF1Q01081 240 aaKnown RBP eCLIP10.08□□□□□ -0.8
RN7SL233P-201ENST00000469988 EP400Q96L91 3159 aa10.08□□□□□ -0.8
RN7SL233P-201ENST00000469988 TNS2Q63HR2 1409 aa10.07□□□□□ -0.8
RN7SL233P-201ENST00000469988 CCER2I3L3R5 266 aa10.07□□□□□ -0.8
RN7SL233P-201ENST00000469988 EIF4A2Q14240 407 aaKnown RBP10.07□□□□□ -0.8
RN7SL233P-201ENST00000469988 SEPT12Q8IYM1 358 aa10.07□□□□□ -0.8
RN7SL233P-201ENST00000469988 RAPGEF4Q8WZA2 1011 aa10.07□□□□□ -0.8
RN7SL233P-201ENST00000469988 CDCA7Q9BWT1 371 aaPredicted RBP10.07□□□□□ -0.8
RN7SL233P-201ENST00000469988 PKD1L3Q7Z443 1732 aa10.07□□□□□ -0.8
RN7SL233P-201ENST00000469988 SHANK3Q9BYB0 1731 aa10.07□□□□□ -0.8
RN7SL233P-201ENST00000469988 MEGF6O75095 1541 aa10.07□□□□□ -0.8
RN7SL233P-201ENST00000469988 MIER1Q8N108 512 aa10.06□□□□□ -0.8
RN7SL233P-201ENST00000469988 OVOS2A0A0G2JMS6 1433 aa10.06□□□□□ -0.8
RN7SL233P-201ENST00000469988 MAPK8IP3Q9UPT6 1336 aa10.06□□□□□ -0.8
RN7SL233P-201ENST00000469988 PLEKHG2Q9H7P9 1386 aa10.05□□□□□ -0.8
RN7SL233P-201ENST00000469988 NBPF6Q5VWK0 638 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms