RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 ZC3H15Q8WU90 426 aaKnown RBP10.3□□□□□ -0.76
VPS8-219ENST00000469479 NUTM2BA6NNL0 878 aaPredicted RBP10.29□□□□□ -0.76
VPS8-219ENST00000469479 TTLL8A6PVC2 850 aa10.29□□□□□ -0.76
VPS8-219ENST00000469479 NUTM2EB1AL46 878 aaPredicted RBP10.29□□□□□ -0.76
VPS8-219ENST00000469479 TUSC1Q2TAM9 212 aa10.29□□□□□ -0.76
VPS8-219ENST00000469479 NUTM2DQ5VT03 806 aaPredicted RBP10.29□□□□□ -0.76
VPS8-219ENST00000469479 NUTM2AQ8IVF1 878 aaPredicted RBP10.29□□□□□ -0.76
VPS8-219ENST00000469479 CCDC116Q8IYX3 515 aa10.29□□□□□ -0.76
VPS8-219ENST00000469479 TSC1Q92574 1164 aa10.29□□□□□ -0.76
VPS8-219ENST00000469479 CSPP1Q1MSJ5 1256 aa10.28□□□□□ -0.76
VPS8-219ENST00000469479 NANOS1Q8WY41 292 aaKnown RBP10.28□□□□□ -0.76
VPS8-219ENST00000469479 SCARF2Q96GP6 870 aaPredicted RBP10.28□□□□□ -0.76
VPS8-219ENST00000469479 PTSQ03393 145 aa10.27□□□□□ -0.77
VPS8-219ENST00000469479 SH3BP5LQ7L8J4 393 aa10.27□□□□□ -0.77
VPS8-219ENST00000469479 GPKOWQ92917 476 aaPredicted RBP eCLIP10.27□□□□□ -0.77
VPS8-219ENST00000469479 TRIM66O15016 1216 aa10.26□□□□□ -0.77
VPS8-219ENST00000469479 HELBQ8NG08 1087 aaPredicted RBP10.26□□□□□ -0.77
VPS8-219ENST00000469479 ARHGEF15O94989 841 aa10.25□□□□□ -0.77
VPS8-219ENST00000469479 PGPEP1Q9NXJ5 209 aa10.25□□□□□ -0.77
VPS8-219ENST00000469479 MAGEB6P1A0A0J9YX57 407 aa10.24□□□□□ -0.77
VPS8-219ENST00000469479 LILRB3O75022 631 aa10.24□□□□□ -0.77
VPS8-219ENST00000469479 ADAM23O75077 832 aa10.24□□□□□ -0.77
VPS8-219ENST00000469479 WHAMMQ8TF30 809 aa10.24□□□□□ -0.77
VPS8-219ENST00000469479 QPCTQ16769 361 aa10.23□□□□□ -0.77
VPS8-219ENST00000469479 AK7Q96M32 723 aa10.23□□□□□ -0.77
VPS8-219ENST00000469479 LIMD1Q9UGP4 676 aa10.23□□□□□ -0.77
VPS8-219ENST00000469479 SHROOM4Q9ULL8 1493 aa10.23□□□□□ -0.77
VPS8-219ENST00000469479 FIGNL2A6NMB9 653 aa10.22□□□□□ -0.77
VPS8-219ENST00000469479 SPINT1O43278 529 aa10.22□□□□□ -0.77
VPS8-219ENST00000469479 SLURP2P0DP57 97 aa10.22□□□□□ -0.77
VPS8-219ENST00000469479 RNFT1Q5M7Z0 435 aa10.22□□□□□ -0.77
VPS8-219ENST00000469479 MYSM1Q5VVJ2 828 aa10.22□□□□□ -0.77
VPS8-219ENST00000469479 Q6ZVU0 165 aa10.22□□□□□ -0.77
VPS8-219ENST00000469479 CCDC155Q8N6L0 562 aa10.22□□□□□ -0.77
VPS8-219ENST00000469479 MSTNO14793 375 aa10.21□□□□□ -0.77
VPS8-219ENST00000469479 PPP1R26Q5T8A7 1209 aaPredicted RBP10.21□□□□□ -0.77
VPS8-219ENST00000469479 KRTAP4-8Q9BYQ9 185 aa10.21□□□□□ -0.77
VPS8-219ENST00000469479 MYO15BQ96JP2 1530 aa10.21□□□□□ -0.78
VPS8-219ENST00000469479 CARD14Q9BXL6 1004 aa10.2□□□□□ -0.78
VPS8-219ENST00000469479 CDV3Q9UKY7 258 aaKnown RBP10.2□□□□□ -0.78
VPS8-219ENST00000469479 ERFEQ4G0M1 354 aa10.19□□□□□ -0.78
VPS8-219ENST00000469479 BICRAQ9NZM4 1560 aa10.18□□□□□ -0.78
VPS8-219ENST00000469479 SLC35F4A4IF30 521 aa10.18□□□□□ -0.78
VPS8-219ENST00000469479 DHX9Q08211 1270 aaKnown RBP10.18□□□□□ -0.78
VPS8-219ENST00000469479 CBLBQ13191 982 aa10.18□□□□□ -0.78
VPS8-219ENST00000469479 RTL5Q5HYW3 569 aaPredicted RBP10.17□□□□□ -0.78
VPS8-219ENST00000469479 PDXDC2PQ6P474 469 aa10.17□□□□□ -0.78
VPS8-219ENST00000469479 SV2AQ7L0J3 742 aa10.17□□□□□ -0.78
VPS8-219ENST00000469479 CECR2Q9BXF3 1484 aa10.17□□□□□ -0.78
VPS8-219ENST00000469479 ITGA6P23229 1130 aa10.16□□□□□ -0.78
VPS8-219ENST00000469479 VWA5B2Q8N398 1253 aa10.16□□□□□ -0.78
VPS8-219ENST00000469479 KCTD15Q96SI1 283 aaPredicted RBP10.16□□□□□ -0.78
VPS8-219ENST00000469479 UNC13AQ9UPW8 1703 aa10.16□□□□□ -0.78
VPS8-219ENST00000469479 SLC10A4Q96EP9 437 aa10.15□□□□□ -0.78
VPS8-219ENST00000469479 ARHGAP9Q9BRR9 750 aa10.15□□□□□ -0.78
VPS8-219ENST00000469479 MAP3K10Q02779 954 aa10.14□□□□□ -0.79
VPS8-219ENST00000469479 PLA2G4EQ3MJ16 856 aa10.14□□□□□ -0.79
VPS8-219ENST00000469479 SPOCK3Q9BQ16 436 aa10.14□□□□□ -0.79
VPS8-219ENST00000469479 RSPH6AQ9H0K4 717 aa10.14□□□□□ -0.79
VPS8-219ENST00000469479 CDC14CA4D256 554 aa10.13□□□□□ -0.79
VPS8-219ENST00000469479 CLK2P49760 499 aaKnown RBP10.13□□□□□ -0.79
VPS8-219ENST00000469479 PDE4DQ08499 809 aa10.12□□□□□ -0.79
VPS8-219ENST00000469479 ZBTB33Q86T24 672 aa10.12□□□□□ -0.79
VPS8-219ENST00000469479 CTSOP43234 321 aaPredicted RBP10.11□□□□□ -0.79
VPS8-219ENST00000469479 PSMG3-AS1Q96PY0 264 aa10.11□□□□□ -0.79
VPS8-219ENST00000469479 FKBPLQ9UIM3 349 aa10.11□□□□□ -0.79
VPS8-219ENST00000469479 ZC3H4Q9UPT8 1303 aaKnown RBP10.1□□□□□ -0.79
VPS8-219ENST00000469479 ADAMTS2O95450 1211 aa10.1□□□□□ -0.79
VPS8-219ENST00000469479 RELBQ01201 579 aa10.1□□□□□ -0.79
VPS8-219ENST00000469479 LYPD4Q6UWN0 246 aa10.1□□□□□ -0.79
VPS8-219ENST00000469479 GALNT6Q8NCL4 622 aa10.1□□□□□ -0.79
VPS8-219ENST00000469479 ENAMQ9NRM1 1142 aa10.1□□□□□ -0.79
VPS8-219ENST00000469479 CC2D2AQ9P2K1 1620 aa10.09□□□□□ -0.79
VPS8-219ENST00000469479 PHF20L1A8MW92 1017 aa10.09□□□□□ -0.79
VPS8-219ENST00000469479 CTDSPL2Q05D32 466 aa10.09□□□□□ -0.79
VPS8-219ENST00000469479 DCAF5Q96JK2 942 aa10.09□□□□□ -0.79
VPS8-219ENST00000469479 AGBL1Q96MI9 1066 aa10.09□□□□□ -0.79
VPS8-219ENST00000469479 INSM2Q96T92 566 aaPredicted RBP10.09□□□□□ -0.79
VPS8-219ENST00000469479 POLMQ9NP87 494 aaPredicted RBP10.09□□□□□ -0.79
VPS8-219ENST00000469479 INTS6LQ5JSJ4 861 aaKnown RBP10.08□□□□□ -0.8
VPS8-219ENST00000469479 PTK2Q05397 1052 aa10.07□□□□□ -0.8
VPS8-219ENST00000469479 GPSM3Q9Y4H4 160 aa10.07□□□□□ -0.8
VPS8-219ENST00000469479 SRSF11Q05519 484 aaKnown RBP10.06□□□□□ -0.8
VPS8-219ENST00000469479 RNF217Q8TC41 542 aa10.06□□□□□ -0.8
VPS8-219ENST00000469479 POLR3EQ9NVU0 708 aa10.06□□□□□ -0.8
VPS8-219ENST00000469479 K7ELQ4 463 aaPredicted RBP10.05□□□□□ -0.8
VPS8-219ENST00000469479 CELA2BP08218 269 aaPredicted RBP10.05□□□□□ -0.8
VPS8-219ENST00000469479 SENP3-EIF4A1A0A087X0R7 540 aa10.04□□□□□ -0.8
VPS8-219ENST00000469479 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.04□□□□□ -0.8
VPS8-219ENST00000469479 NBPF20Q3BBV1 942 aa10.04□□□□□ -0.8
VPS8-219ENST00000469479 Q8N3U1 123 aa10.04□□□□□ -0.8
VPS8-219ENST00000469479 BEND7Q8N7W2 519 aaPredicted RBP10.04□□□□□ -0.8
VPS8-219ENST00000469479 ZNF395Q9H8N7 513 aaPredicted RBP10.04□□□□□ -0.8
VPS8-219ENST00000469479 TRIM52Q96A61 297 aa10.03□□□□□ -0.8
VPS8-219ENST00000469479 KRTAP9-2Q9BYQ4 174 aa10.03□□□□□ -0.8
VPS8-219ENST00000469479 CNTNAP5Q8WYK1 1306 aa10.03□□□□□ -0.8
VPS8-219ENST00000469479 PROCP04070 461 aa10.02□□□□□ -0.81
VPS8-219ENST00000469479 ITGB2P05107 769 aa10.02□□□□□ -0.81
VPS8-219ENST00000469479 ADH1AP07327 375 aa10.02□□□□□ -0.81
VPS8-219ENST00000469479 LRRN4Q8WUT4 740 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms