RNA–Protein interactions for RNA: ENST00000469028.1

SNU13-206, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-206ENST00000469028 SPATA31A7Q8IWB4 1347 aa15.19■□□□□ 0.02
SNU13-206ENST00000469028 ABCC6O95255 1503 aa15.19■□□□□ 0.02
SNU13-206ENST00000469028 SOCS7O14512 581 aa15.19■□□□□ 0.02
SNU13-206ENST00000469028 FBLN1P23142 703 aa15.19■□□□□ 0.02
SNU13-206ENST00000469028 CCDC9Q9Y3X0 531 aaKnown RBP15.19■□□□□ 0.02
SNU13-206ENST00000469028 RGPD5Q99666 1765 aa15.19■□□□□ 0.02
SNU13-206ENST00000469028 LARP1Q6PKG0 1096 aaKnown RBP15.18■□□□□ 0.02
SNU13-206ENST00000469028 SPATA31A1Q5TZJ5 1347 aa15.17■□□□□ 0.02
SNU13-206ENST00000469028 CGNL1Q0VF96 1302 aa15.17■□□□□ 0.02
SNU13-206ENST00000469028 ONECUT3O60422 494 aaPredicted RBP15.16■□□□□ 0.02
SNU13-206ENST00000469028 EVA1CP58658 441 aa15.16■□□□□ 0.02
SNU13-206ENST00000469028 ANKRD26Q9UPS8 1709 aa15.16■□□□□ 0.02
SNU13-206ENST00000469028 MAP3K19Q56UN5 1328 aa15.16■□□□□ 0.02
SNU13-206ENST00000469028 FAM98CQ17RN3 349 aaKnown RBP15.15■□□□□ 0.02
SNU13-206ENST00000469028 CRB1P82279 1406 aa15.15■□□□□ 0.02
SNU13-206ENST00000469028 THSD7AQ9UPZ6 1657 aa15.15■□□□□ 0.02
SNU13-206ENST00000469028 RRS1Q15050 365 aaKnown RBP15.14■□□□□ 0.01
SNU13-206ENST00000469028 SEPT12Q8IYM1 358 aa15.14■□□□□ 0.01
SNU13-206ENST00000469028 WDR17Q8IZU2 1322 aa15.14■□□□□ 0.01
SNU13-206ENST00000469028 BRWD3Q6RI45 1802 aa15.13■□□□□ 0.01
SNU13-206ENST00000469028 PEAK1Q9H792 1746 aa15.13■□□□□ 0.01
SNU13-206ENST00000469028 USP35Q9P2H5 1018 aa15.13■□□□□ 0.01
SNU13-206ENST00000469028 BLMP54132 1417 aaPredicted RBP15.12■□□□□ 0.01
SNU13-206ENST00000469028 PER1O15534 1290 aaPredicted RBP15.12■□□□□ 0.01
SNU13-206ENST00000469028 HOXC9P31274 260 aa15.12■□□□□ 0.01
SNU13-206ENST00000469028 ZEB1P37275 1124 aaPredicted RBP15.12■□□□□ 0.01
SNU13-206ENST00000469028 IP6K1Q92551 441 aa15.12■□□□□ 0.01
SNU13-206ENST00000469028 ERBB3P21860 1342 aa15.12■□□□□ 0.01
SNU13-206ENST00000469028 NSD2O96028 1365 aa15.11■□□□□ 0.01
SNU13-206ENST00000469028 AMER1Q5JTC6 1135 aaPredicted RBP15.11■□□□□ 0.01
SNU13-206ENST00000469028 BARGINQ6ZT62 677 aa15.11■□□□□ 0.01
SNU13-206ENST00000469028 TOM1L2Q6ZVM7 507 aa15.11■□□□□ 0.01
SNU13-206ENST00000469028 RTL1A6NKG5 1358 aa15.11■□□□□ 0.01
SNU13-206ENST00000469028 TCP11L2Q8N4U5 519 aa15.1■□□□□ 0.01
SNU13-206ENST00000469028 ANKRD24Q8TF21 1146 aa15.1■□□□□ 0.01
SNU13-206ENST00000469028 KNSTRNQ9Y448 316 aa15.1■□□□□ 0.01
SNU13-206ENST00000469028 WNK3Q9BYP7 1800 aa15.1■□□□□ 0.01
SNU13-206ENST00000469028 A0A0G2JS52 829 aa15.09■□□□□ 0.01
SNU13-206ENST00000469028 CSB-PGBD3P0DP91 1061 aa15.09■□□□□ 0.01
SNU13-206ENST00000469028 AMPHP49418 695 aa15.09■□□□□ 0.01
SNU13-206ENST00000469028 MYT1Q01538 1121 aa15.09■□□□□ 0.01
SNU13-206ENST00000469028 THRAP3Q9Y2W1 955 aaKnown RBP15.09■□□□□ 0.01
SNU13-206ENST00000469028 EMILIN1Q9Y6C2 1016 aa15.09■□□□□ 0.01
SNU13-206ENST00000469028 CARD10Q9BWT7 1032 aa15.08■□□□□ 0
SNU13-206ENST00000469028 PARP4Q9UKK3 1724 aaKnown RBP15.07■□□□□ 0
SNU13-206ENST00000469028 LTV1Q96GA3 475 aaPredicted RBP15.07■□□□□ 0
SNU13-206ENST00000469028 FLT4P35916 1363 aa15.07■□□□□ 0
SNU13-206ENST00000469028 KIF24Q5T7B8 1368 aa15.07■□□□□ 0
SNU13-206ENST00000469028 DISP2A7MBM2 1401 aa15.07■□□□□ 0
SNU13-206ENST00000469028 LRRC37A3O60309 1634 aa15.06■□□□□ 0
SNU13-206ENST00000469028 TNNT2P45379 298 aaPredicted RBP15.06■□□□□ 0
SNU13-206ENST00000469028 HSP90AB2PQ58FF8 381 aa15.06■□□□□ 0
SNU13-206ENST00000469028 KRT27Q7Z3Y8 459 aa15.06■□□□□ 0
SNU13-206ENST00000469028 UPF1Q92900 1129 aaKnown RBP eCLIP15.06■□□□□ 0
SNU13-206ENST00000469028 POLKQ9UBT6 870 aa15.06■□□□□ 0
SNU13-206ENST00000469028 EP400Q96L91 3159 aa15.06■□□□□ 0
SNU13-206ENST00000469028 INSRP06213 1382 aa15.06■□□□□ 0
SNU13-206ENST00000469028 FAM208AQ9UK61 1670 aaKnown RBP15.06■□□□□ 0
SNU13-206ENST00000469028 MAP2P11137 1827 aaKnown RBP15.06■□□□□ 0
SNU13-206ENST00000469028 NLRP2Q9NX02 1062 aa15.05■□□□□ -0
SNU13-206ENST00000469028 SMG6Q86US8 1419 aaKnown RBP15.05■□□□□ -0
SNU13-206ENST00000469028 RGPD2P0DJD1 1756 aa15.05■□□□□ -0
SNU13-206ENST00000469028 MORC1Q86VD1 984 aa15.04■□□□□ -0
SNU13-206ENST00000469028 NPC1L1Q9UHC9 1359 aa15.03■□□□□ -0
SNU13-206ENST00000469028 CC2D1BQ5T0F9 858 aaKnown RBP15.03■□□□□ -0
SNU13-206ENST00000469028 FAM182BQ5T319 152 aa15.03■□□□□ -0
SNU13-206ENST00000469028 PPM1GO15355 546 aaPredicted RBP15.02■□□□□ -0
SNU13-206ENST00000469028 NBPF6Q5VWK0 638 aa15.01□□□□□ -0.01
SNU13-206ENST00000469028 NBPF4Q96M43 638 aa15.01□□□□□ -0.01
SNU13-206ENST00000469028 CDCA7Q9BWT1 371 aaPredicted RBP15□□□□□ -0.01
SNU13-206ENST00000469028 TNS2Q63HR2 1409 aa15□□□□□ -0.01
SNU13-206ENST00000469028 CNGB1Q14028 1251 aaPredicted RBP14.99□□□□□ -0.01
SNU13-206ENST00000469028 DDB1Q16531 1140 aa14.99□□□□□ -0.01
SNU13-206ENST00000469028 USHBP1Q8N6Y0 703 aa14.99□□□□□ -0.01
SNU13-206ENST00000469028 MEGF6O75095 1541 aa14.98□□□□□ -0.01
SNU13-206ENST00000469028 IL2RBP14784 551 aa14.98□□□□□ -0.01
SNU13-206ENST00000469028 PDE3BQ13370 1112 aa14.98□□□□□ -0.01
SNU13-206ENST00000469028 NCAPD2Q15021 1401 aa14.98□□□□□ -0.01
SNU13-206ENST00000469028 EIF4A2Q14240 407 aaKnown RBP14.97□□□□□ -0.01
SNU13-206ENST00000469028 MARCH10Q8NA82 808 aaPredicted RBP14.96□□□□□ -0.01
SNU13-206ENST00000469028 OVOS2A0A0G2JMS6 1433 aa14.95□□□□□ -0.02
SNU13-206ENST00000469028 EXOC5O00471 708 aa14.95□□□□□ -0.02
SNU13-206ENST00000469028 EYA1Q99502 592 aa14.95□□□□□ -0.02
SNU13-206ENST00000469028 SHANK3Q9BYB0 1731 aa14.95□□□□□ -0.02
SNU13-206ENST00000469028 MTHFSP49914 203 aa14.94□□□□□ -0.02
SNU13-206ENST00000469028 DDX10Q13206 875 aaKnown RBP14.94□□□□□ -0.02
SNU13-206ENST00000469028 FAM196AQ6ZSG2 479 aa14.94□□□□□ -0.02
SNU13-206ENST00000469028 TNS1Q9HBL0 1735 aaKnown RBP14.94□□□□□ -0.02
SNU13-206ENST00000469028 RGPD1P0DJD0 1748 aa14.93□□□□□ -0.02
SNU13-206ENST00000469028 IGSF1Q8N6C5 1336 aa14.92□□□□□ -0.02
SNU13-206ENST00000469028 BCL9O00512 1426 aa14.92□□□□□ -0.02
SNU13-206ENST00000469028 CCDC125Q86Z20 511 aa14.92□□□□□ -0.02
SNU13-206ENST00000469028 COL3A1P02461 1466 aaPredicted RBP14.92□□□□□ -0.02
SNU13-206ENST00000469028 TRIM37O94972 964 aa14.91□□□□□ -0.02
SNU13-206ENST00000469028 IL13P35225 146 aa14.91□□□□□ -0.02
SNU13-206ENST00000469028 SBF2Q86WG5 1849 aa14.9□□□□□ -0.02
SNU13-206ENST00000469028 PARD3Q8TEW0 1356 aa14.9□□□□□ -0.02
SNU13-206ENST00000469028 DEFB132Q7Z7B7 95 aa14.9□□□□□ -0.02
SNU13-206ENST00000469028 RAPGEF4Q8WZA2 1011 aa14.9□□□□□ -0.02
SNU13-206ENST00000469028 PKD1L3Q7Z443 1732 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms