RNA–Protein interactions for RNA: ENST00000468544.1

NPM3-203, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 5

Gene NPM3, Length 393 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-203ENST00000468544 COL18A1P39060 1754 aa13.82□□□□□ -0.2
NPM3-203ENST00000468544 SLIT2O94813 1529 aa13.82□□□□□ -0.2
NPM3-203ENST00000468544 RALBP1Q15311 655 aa13.82□□□□□ -0.2
NPM3-203ENST00000468544 USP21Q9UK80 565 aa13.81□□□□□ -0.2
NPM3-203ENST00000468544 PEAK1Q9H792 1746 aa13.81□□□□□ -0.2
NPM3-203ENST00000468544 LMO7Q8WWI1 1683 aa13.8□□□□□ -0.2
NPM3-203ENST00000468544 UNC5CLQ8IV45 518 aa13.8□□□□□ -0.2
NPM3-203ENST00000468544 LTV1Q96GA3 475 aaPredicted RBP13.8□□□□□ -0.2
NPM3-203ENST00000468544 STRN4Q9NRL3 753 aa13.8□□□□□ -0.2
NPM3-203ENST00000468544 MAP2P11137 1827 aaKnown RBP13.8□□□□□ -0.2
NPM3-203ENST00000468544 SMG6Q86US8 1419 aaKnown RBP13.8□□□□□ -0.2
NPM3-203ENST00000468544 LTN1O94822 1766 aa13.79□□□□□ -0.2
NPM3-203ENST00000468544 COL14A1Q05707 1796 aaKnown RBP13.79□□□□□ -0.2
NPM3-203ENST00000468544 DIEXFQ68CQ4 756 aaKnown RBP13.79□□□□□ -0.2
NPM3-203ENST00000468544 LARP1Q6PKG0 1096 aaKnown RBP13.79□□□□□ -0.2
NPM3-203ENST00000468544 ANKRD24Q8TF21 1146 aa13.79□□□□□ -0.2
NPM3-203ENST00000468544 FLT4P35916 1363 aa13.79□□□□□ -0.2
NPM3-203ENST00000468544 EVA1CP58658 441 aa13.78□□□□□ -0.2
NPM3-203ENST00000468544 RTL1A6NKG5 1358 aa13.78□□□□□ -0.2
NPM3-203ENST00000468544 INSRP06213 1382 aa13.78□□□□□ -0.2
NPM3-203ENST00000468544 KIF24Q5T7B8 1368 aa13.78□□□□□ -0.2
NPM3-203ENST00000468544 COL5A2P05997 1499 aaPredicted RBP13.78□□□□□ -0.2
NPM3-203ENST00000468544 ANP32CO43423 234 aa13.77□□□□□ -0.21
NPM3-203ENST00000468544 ERBB3P21860 1342 aa13.77□□□□□ -0.21
NPM3-203ENST00000468544 QTRT2Q9H974 415 aaKnown RBP13.77□□□□□ -0.21
NPM3-203ENST00000468544 RGPD5Q99666 1765 aa13.76□□□□□ -0.21
NPM3-203ENST00000468544 PLCH1Q4KWH8 1693 aa13.76□□□□□ -0.21
NPM3-203ENST00000468544 BLMP54132 1417 aaPredicted RBP13.76□□□□□ -0.21
NPM3-203ENST00000468544 MYBBP1AQ9BQG0 1328 aaKnown RBP13.76□□□□□ -0.21
NPM3-203ENST00000468544 EIF4A2Q14240 407 aaKnown RBP13.76□□□□□ -0.21
NPM3-203ENST00000468544 POTEAQ6S8J7 498 aa13.76□□□□□ -0.21
NPM3-203ENST00000468544 WDR17Q8IZU2 1322 aa13.75□□□□□ -0.21
NPM3-203ENST00000468544 IL13P35225 146 aa13.75□□□□□ -0.21
NPM3-203ENST00000468544 VPS72Q15906 364 aa13.75□□□□□ -0.21
NPM3-203ENST00000468544 CCDC184Q52MB2 194 aa13.75□□□□□ -0.21
NPM3-203ENST00000468544 PHF23Q9BUL5 403 aaPredicted RBP13.75□□□□□ -0.21
NPM3-203ENST00000468544 ABCC6O95255 1503 aa13.74□□□□□ -0.21
NPM3-203ENST00000468544 CDK12Q9NYV4 1490 aaPredicted RBP13.74□□□□□ -0.21
NPM3-203ENST00000468544 NRAPQ86VF7 1730 aa13.74□□□□□ -0.21
NPM3-203ENST00000468544 CSB-PGBD3P0DP91 1061 aa13.74□□□□□ -0.21
NPM3-203ENST00000468544 NBPF6Q5VWK0 638 aa13.74□□□□□ -0.21
NPM3-203ENST00000468544 ZNF772Q68DY9 489 aaPredicted RBP13.74□□□□□ -0.21
NPM3-203ENST00000468544 TOM1L2Q6ZVM7 507 aa13.74□□□□□ -0.21
NPM3-203ENST00000468544 NBPF4Q96M43 638 aa13.74□□□□□ -0.21
NPM3-203ENST00000468544 TRPC5Q9UL62 973 aaPredicted RBP13.74□□□□□ -0.21
NPM3-203ENST00000468544 ATRNO75882 1429 aa13.73□□□□□ -0.21
NPM3-203ENST00000468544 NWD2Q9ULI1 1742 aa13.73□□□□□ -0.21
NPM3-203ENST00000468544 SPATA31A5Q5VU36 1347 aa13.73□□□□□ -0.21
NPM3-203ENST00000468544 SPATA31A7Q8IWB4 1347 aa13.73□□□□□ -0.21
NPM3-203ENST00000468544 EYA1Q99502 592 aa13.73□□□□□ -0.21
NPM3-203ENST00000468544 NLRP2Q9NX02 1062 aa13.73□□□□□ -0.21
NPM3-203ENST00000468544 USP35Q9P2H5 1018 aa13.73□□□□□ -0.21
NPM3-203ENST00000468544 COL3A1P02461 1466 aaPredicted RBP13.73□□□□□ -0.21
NPM3-203ENST00000468544 SPATA31A1Q5TZJ5 1347 aa13.72□□□□□ -0.21
NPM3-203ENST00000468544 DIAPH1O60610 1272 aaKnown RBP13.72□□□□□ -0.21
NPM3-203ENST00000468544 USHBP1Q8N6Y0 703 aa13.72□□□□□ -0.21
NPM3-203ENST00000468544 GJD4Q96KN9 370 aaPredicted RBP13.72□□□□□ -0.21
NPM3-203ENST00000468544 CARD10Q9BWT7 1032 aa13.72□□□□□ -0.21
NPM3-203ENST00000468544 CCDC9Q9Y3X0 531 aaKnown RBP13.72□□□□□ -0.21
NPM3-203ENST00000468544 MIER1Q8N108 512 aa13.71□□□□□ -0.21
NPM3-203ENST00000468544 CRB1P82279 1406 aa13.71□□□□□ -0.22
NPM3-203ENST00000468544 CFAP53Q96M91 514 aa13.7□□□□□ -0.22
NPM3-203ENST00000468544 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.7□□□□□ -0.22
NPM3-203ENST00000468544 AEBP1Q8IUX7 1158 aa13.69□□□□□ -0.22
NPM3-203ENST00000468544 TCP11L2Q8N4U5 519 aa13.69□□□□□ -0.22
NPM3-203ENST00000468544 IGSF1Q8N6C5 1336 aa13.68□□□□□ -0.22
NPM3-203ENST00000468544 RBM6P78332 1123 aaKnown RBP13.68□□□□□ -0.22
NPM3-203ENST00000468544 FAM98CQ17RN3 349 aaKnown RBP13.68□□□□□ -0.22
NPM3-203ENST00000468544 RGPD2P0DJD1 1756 aa13.68□□□□□ -0.22
NPM3-203ENST00000468544 GLI3P10071 1580 aa13.67□□□□□ -0.22
NPM3-203ENST00000468544 U2SURPO15042 1029 aaKnown RBP13.67□□□□□ -0.22
NPM3-203ENST00000468544 RXRBP28702 533 aa13.67□□□□□ -0.22
NPM3-203ENST00000468544 SULT6B1Q6IMI4 303 aa13.67□□□□□ -0.22
NPM3-203ENST00000468544 BARGINQ6ZT62 677 aa13.67□□□□□ -0.22
NPM3-203ENST00000468544 ONECUT3O60422 494 aaPredicted RBP13.66□□□□□ -0.22
NPM3-203ENST00000468544 HMOX1P09601 288 aa13.66□□□□□ -0.22
NPM3-203ENST00000468544 THRAP3Q9Y2W1 955 aaKnown RBP13.66□□□□□ -0.22
NPM3-203ENST00000468544 NCAPD2Q15021 1401 aa13.65□□□□□ -0.22
NPM3-203ENST00000468544 MRS2Q9HD23 443 aa13.65□□□□□ -0.22
NPM3-203ENST00000468544 FAM208AQ9UK61 1670 aaKnown RBP13.64□□□□□ -0.23
NPM3-203ENST00000468544 U2AF1L5P0DN76 240 aaPredicted RBP13.64□□□□□ -0.23
NPM3-203ENST00000468544 IL2RBP14784 551 aa13.64□□□□□ -0.23
NPM3-203ENST00000468544 U2AF1Q01081 240 aaKnown RBP eCLIP13.64□□□□□ -0.23
NPM3-203ENST00000468544 NUDCQ9Y266 331 aa13.64□□□□□ -0.23
NPM3-203ENST00000468544 RGPD1P0DJD0 1748 aa13.64□□□□□ -0.23
NPM3-203ENST00000468544 DISP2A7MBM2 1401 aa13.64□□□□□ -0.23
NPM3-203ENST00000468544 KDRP35968 1356 aa13.63□□□□□ -0.23
NPM3-203ENST00000468544 SEPT12Q8IYM1 358 aa13.63□□□□□ -0.23
NPM3-203ENST00000468544 PNISRQ8TF01 805 aaKnown RBP13.63□□□□□ -0.23
NPM3-203ENST00000468544 MEGF6O75095 1541 aa13.63□□□□□ -0.23
NPM3-203ENST00000468544 RAPGEF4Q8WZA2 1011 aa13.62□□□□□ -0.23
NPM3-203ENST00000468544 RSPH6AQ9H0K4 717 aa13.62□□□□□ -0.23
NPM3-203ENST00000468544 ADAMTS8Q9UP79 889 aa13.62□□□□□ -0.23
NPM3-203ENST00000468544 CCER2I3L3R5 266 aa13.61□□□□□ -0.23
NPM3-203ENST00000468544 A0A0G2JS52 829 aa13.6□□□□□ -0.23
NPM3-203ENST00000468544 FCHSD2O94868 740 aa13.6□□□□□ -0.23
NPM3-203ENST00000468544 TATP17735 454 aaPredicted RBP13.6□□□□□ -0.23
NPM3-203ENST00000468544 MYT1Q01538 1121 aa13.6□□□□□ -0.23
NPM3-203ENST00000468544 PHACTR3Q96KR7 559 aa13.6□□□□□ -0.23
NPM3-203ENST00000468544 CDCA7Q9BWT1 371 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms