RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 SF3B2Q13435 895 aaKnown RBP20.37■□□□□ 0.85
COMMD3-206ENST00000468179 LARP1Q6PKG0 1096 aaKnown RBP20.37■□□□□ 0.85
COMMD3-206ENST00000468179 TCP11L2Q8N4U5 519 aa20.37■□□□□ 0.85
COMMD3-206ENST00000468179 USP35Q9P2H5 1018 aa20.37■□□□□ 0.85
COMMD3-206ENST00000468179 MON2Q7Z3U7 1717 aa20.36■□□□□ 0.85
COMMD3-206ENST00000468179 SOX12O15370 315 aa20.36■□□□□ 0.85
COMMD3-206ENST00000468179 KCNA4P22459 653 aa20.36■□□□□ 0.85
COMMD3-206ENST00000468179 NME9Q86XW9 330 aa20.36■□□□□ 0.85
COMMD3-206ENST00000468179 ANKRD36BQ8N2N9 1353 aa20.34■□□□□ 0.85
COMMD3-206ENST00000468179 EIF4G2P78344 907 aaKnown RBP eCLIP20.34■□□□□ 0.85
COMMD3-206ENST00000468179 LMO7Q8WWI1 1683 aa20.34■□□□□ 0.85
COMMD3-206ENST00000468179 COL5A2P05997 1499 aaPredicted RBP20.34■□□□□ 0.85
COMMD3-206ENST00000468179 BLMP54132 1417 aaPredicted RBP20.34■□□□□ 0.85
COMMD3-206ENST00000468179 CRB1P82279 1406 aa20.33■□□□□ 0.84
COMMD3-206ENST00000468179 TOM1L2Q6ZVM7 507 aa20.32■□□□□ 0.84
COMMD3-206ENST00000468179 COG3Q96JB2 828 aa20.32■□□□□ 0.84
COMMD3-206ENST00000468179 ZRANB1Q9UGI0 708 aa20.32■□□□□ 0.84
COMMD3-206ENST00000468179 CSB-PGBD3P0DP91 1061 aa20.31■□□□□ 0.84
COMMD3-206ENST00000468179 PDE3BQ13370 1112 aa20.31■□□□□ 0.84
COMMD3-206ENST00000468179 WDR17Q8IZU2 1322 aa20.31■□□□□ 0.84
COMMD3-206ENST00000468179 AXIN2Q9Y2T1 843 aa20.3■□□□□ 0.84
COMMD3-206ENST00000468179 BRWD3Q6RI45 1802 aa20.29■□□□□ 0.84
COMMD3-206ENST00000468179 C11orf95C9JLR9 678 aaPredicted RBP20.28■□□□□ 0.84
COMMD3-206ENST00000468179 FAM196AQ6ZSG2 479 aa20.28■□□□□ 0.84
COMMD3-206ENST00000468179 CDCA7Q9BWT1 371 aaPredicted RBP20.28■□□□□ 0.84
COMMD3-206ENST00000468179 THSD7AQ9UPZ6 1657 aa20.28■□□□□ 0.84
COMMD3-206ENST00000468179 NFAT5O94916 1531 aa20.28■□□□□ 0.84
COMMD3-206ENST00000468179 ABCC6O95255 1503 aa20.28■□□□□ 0.84
COMMD3-206ENST00000468179 OVOS2A0A0J9YW53 1432 aa20.27■□□□□ 0.84
COMMD3-206ENST00000468179 OVOS2Q6IE36 1432 aa20.27■□□□□ 0.84
COMMD3-206ENST00000468179 CARD10Q9BWT7 1032 aa20.27■□□□□ 0.83
COMMD3-206ENST00000468179 USP54Q70EL1 1684 aa20.26■□□□□ 0.83
COMMD3-206ENST00000468179 C1QBPQ07021 282 aaKnown RBP20.26■□□□□ 0.83
COMMD3-206ENST00000468179 HSPA5P11021 654 aaKnown RBP20.25■□□□□ 0.83
COMMD3-206ENST00000468179 BAG6P46379 1132 aa20.25■□□□□ 0.83
COMMD3-206ENST00000468179 COL18A1P39060 1754 aa20.24■□□□□ 0.83
COMMD3-206ENST00000468179 CCDC7Q96M83 1385 aa20.23■□□□□ 0.83
COMMD3-206ENST00000468179 FYB1O15117 783 aa20.23■□□□□ 0.83
COMMD3-206ENST00000468179 DDB1Q16531 1140 aa20.22■□□□□ 0.83
COMMD3-206ENST00000468179 FAM182BQ5T319 152 aa20.22■□□□□ 0.83
COMMD3-206ENST00000468179 IP6K1Q92551 441 aa20.22■□□□□ 0.83
COMMD3-206ENST00000468179 POLR3GLQ9BT43 218 aa20.21■□□□□ 0.83
COMMD3-206ENST00000468179 ERBB3P21860 1342 aa20.2■□□□□ 0.82
COMMD3-206ENST00000468179 AMPHP49418 695 aa20.2■□□□□ 0.82
COMMD3-206ENST00000468179 ANKRD24Q8TF21 1146 aa20.2■□□□□ 0.82
COMMD3-206ENST00000468179 GGNBP2Q9H3C7 697 aa20.2■□□□□ 0.82
COMMD3-206ENST00000468179 NLRP2Q9NX02 1062 aa20.2■□□□□ 0.82
COMMD3-206ENST00000468179 DEFB132Q7Z7B7 95 aa20.19■□□□□ 0.82
COMMD3-206ENST00000468179 EXOC5O00471 708 aa20.18■□□□□ 0.82
COMMD3-206ENST00000468179 TRIM37O94972 964 aa20.17■□□□□ 0.82
COMMD3-206ENST00000468179 CARD14Q9BXL6 1004 aa20.17■□□□□ 0.82
COMMD3-206ENST00000468179 CGNL1Q0VF96 1302 aa20.17■□□□□ 0.82
COMMD3-206ENST00000468179 MAP3K19Q56UN5 1328 aa20.17■□□□□ 0.82
COMMD3-206ENST00000468179 NSD3Q9BZ95 1437 aa20.16■□□□□ 0.82
COMMD3-206ENST00000468179 HOXC9P31274 260 aa20.15■□□□□ 0.82
COMMD3-206ENST00000468179 PARP4Q9UKK3 1724 aaKnown RBP20.15■□□□□ 0.82
COMMD3-206ENST00000468179 RTL1A6NKG5 1358 aa20.14■□□□□ 0.81
COMMD3-206ENST00000468179 OVOS2A0A0G2JMS6 1433 aa20.14■□□□□ 0.81
COMMD3-206ENST00000468179 APBA3O96018 575 aa20.13■□□□□ 0.81
COMMD3-206ENST00000468179 IL2RBP14784 551 aa20.13■□□□□ 0.81
COMMD3-206ENST00000468179 DISP2A7MBM2 1401 aa20.13■□□□□ 0.81
COMMD3-206ENST00000468179 RGPD1P0DJD0 1748 aa20.13■□□□□ 0.81
COMMD3-206ENST00000468179 LTN1O94822 1766 aa20.13■□□□□ 0.81
COMMD3-206ENST00000468179 EN1Q05925 392 aaPredicted RBP20.12■□□□□ 0.81
COMMD3-206ENST00000468179 LTV1Q96GA3 475 aaPredicted RBP20.12■□□□□ 0.81
COMMD3-206ENST00000468179 RGPD5Q99666 1765 aa20.11■□□□□ 0.81
COMMD3-206ENST00000468179 KIF24Q5T7B8 1368 aa20.11■□□□□ 0.81
COMMD3-206ENST00000468179 RRS1Q15050 365 aaKnown RBP20.11■□□□□ 0.81
COMMD3-206ENST00000468179 PARD3Q8TEW0 1356 aa20.1■□□□□ 0.81
COMMD3-206ENST00000468179 MYOM1P52179 1685 aa20.1■□□□□ 0.81
COMMD3-206ENST00000468179 EP400Q96L91 3159 aa20.1■□□□□ 0.81
COMMD3-206ENST00000468179 SMG6Q86US8 1419 aaKnown RBP20.1■□□□□ 0.81
COMMD3-206ENST00000468179 FBLN1P23142 703 aa20.09■□□□□ 0.81
COMMD3-206ENST00000468179 MARCH10Q8NA82 808 aaPredicted RBP20.09■□□□□ 0.81
COMMD3-206ENST00000468179 BCL9O00512 1426 aa20.09■□□□□ 0.81
COMMD3-206ENST00000468179 PANK3Q9H999 370 aa20.08■□□□□ 0.81
COMMD3-206ENST00000468179 LRRC37A3O60309 1634 aa20.08■□□□□ 0.8
COMMD3-206ENST00000468179 TNS2Q63HR2 1409 aa20.07■□□□□ 0.8
COMMD3-206ENST00000468179 FLT4P35916 1363 aa20.07■□□□□ 0.8
COMMD3-206ENST00000468179 CAMKK2Q96RR4 588 aa20.06■□□□□ 0.8
COMMD3-206ENST00000468179 BCL11BQ9C0K0 894 aaPredicted RBP20.06■□□□□ 0.8
COMMD3-206ENST00000468179 KIF20BQ96Q89 1820 aa20.06■□□□□ 0.8
COMMD3-206ENST00000468179 INSRP06213 1382 aa20.06■□□□□ 0.8
COMMD3-206ENST00000468179 EZH2Q15910 746 aaKnown RBP20.05■□□□□ 0.8
COMMD3-206ENST00000468179 FAM208AQ9UK61 1670 aaKnown RBP20.04■□□□□ 0.8
COMMD3-206ENST00000468179 WNK3Q9BYP7 1800 aa20.04■□□□□ 0.8
COMMD3-206ENST00000468179 KNSTRNQ9Y448 316 aa20.03■□□□□ 0.8
COMMD3-206ENST00000468179 NSD2O96028 1365 aa20.03■□□□□ 0.8
COMMD3-206ENST00000468179 PLSCR1O15162 318 aa20.02■□□□□ 0.8
COMMD3-206ENST00000468179 HSP90AB2PQ58FF8 381 aa20.02■□□□□ 0.8
COMMD3-206ENST00000468179 TNS1Q9HBL0 1735 aaKnown RBP20.02■□□□□ 0.8
COMMD3-206ENST00000468179 PPM1GO15355 546 aaPredicted RBP20.02■□□□□ 0.79
COMMD3-206ENST00000468179 NBPF14Q5TI25 921 aa20.02■□□□□ 0.79
COMMD3-206ENST00000468179 PEAK1Q9H792 1746 aa20.01■□□□□ 0.79
COMMD3-206ENST00000468179 NBPF6Q5VWK0 638 aa20.01■□□□□ 0.79
COMMD3-206ENST00000468179 RAPGEF4Q8WZA2 1011 aa20.01■□□□□ 0.79
COMMD3-206ENST00000468179 NBPF4Q96M43 638 aa20.01■□□□□ 0.79
COMMD3-206ENST00000468179 EMILIN1Q9Y6C2 1016 aa20.01■□□□□ 0.79
COMMD3-206ENST00000468179 KIF7Q2M1P5 1343 aa19.99■□□□□ 0.79
COMMD3-206ENST00000468179 WASHC2AQ641Q2 1341 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms