RNA–Protein interactions for RNA: ENST00000468108.1

CCDC66-211, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-211ENST00000468108 TTLL12Q14166 644 aaPredicted RBP9.73□□□□□ -0.85
CCDC66-211ENST00000468108 TRMT44Q8IYL2 757 aaKnown RBP9.73□□□□□ -0.85
CCDC66-211ENST00000468108 ZBTB3Q9H5J0 574 aa9.73□□□□□ -0.85
CCDC66-211ENST00000468108 MSTNO14793 375 aa9.72□□□□□ -0.85
CCDC66-211ENST00000468108 PER1O15534 1290 aaPredicted RBP9.72□□□□□ -0.85
CCDC66-211ENST00000468108 LYPD4Q6UWN0 246 aa9.72□□□□□ -0.85
CCDC66-211ENST00000468108 Q6ZVU0 165 aa9.72□□□□□ -0.85
CCDC66-211ENST00000468108 ARMC2Q8NEN0 867 aa9.72□□□□□ -0.85
CCDC66-211ENST00000468108 TBC1D2Q9BYX2 928 aa9.72□□□□□ -0.85
CCDC66-211ENST00000468108 MAP3K10Q02779 954 aa9.71□□□□□ -0.86
CCDC66-211ENST00000468108 BEGAINQ9BUH8 593 aa9.71□□□□□ -0.86
CCDC66-211ENST00000468108 PPP1R26Q5T8A7 1209 aaPredicted RBP9.7□□□□□ -0.86
CCDC66-211ENST00000468108 SH3BP5LQ7L8J4 393 aa9.7□□□□□ -0.86
CCDC66-211ENST00000468108 PGPEP1Q9NXJ5 209 aa9.7□□□□□ -0.86
CCDC66-211ENST00000468108 MAGEB6P1A0A0J9YX57 407 aa9.69□□□□□ -0.86
CCDC66-211ENST00000468108 PLA2G4EQ3MJ16 856 aa9.69□□□□□ -0.86
CCDC66-211ENST00000468108 NBPF14Q5TI25 921 aa9.69□□□□□ -0.86
CCDC66-211ENST00000468108 GIGYF2Q6Y7W6 1299 aaKnown RBP9.69□□□□□ -0.86
CCDC66-211ENST00000468108 SPOCK3Q9BQ16 436 aa9.69□□□□□ -0.86
CCDC66-211ENST00000468108 ZCCHC6Q5VYS8 1495 aaKnown RBP9.68□□□□□ -0.86
CCDC66-211ENST00000468108 SRSF11Q05519 484 aaKnown RBP9.68□□□□□ -0.86
CCDC66-211ENST00000468108 DIXDC1Q155Q3 683 aa9.68□□□□□ -0.86
CCDC66-211ENST00000468108 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.68□□□□□ -0.86
CCDC66-211ENST00000468108 CABLES1Q8TDN4 633 aa9.68□□□□□ -0.86
CCDC66-211ENST00000468108 CELA2BP08218 269 aaPredicted RBP9.67□□□□□ -0.86
CCDC66-211ENST00000468108 CTSOP43234 321 aaPredicted RBP9.67□□□□□ -0.86
CCDC66-211ENST00000468108 PRPF38BQ5VTL8 546 aaKnown RBP9.67□□□□□ -0.86
CCDC66-211ENST00000468108 CARD14Q9BXL6 1004 aa9.67□□□□□ -0.86
CCDC66-211ENST00000468108 TSC1Q92574 1164 aa9.66□□□□□ -0.86
CCDC66-211ENST00000468108 DCAF5Q96JK2 942 aa9.66□□□□□ -0.86
CCDC66-211ENST00000468108 ITGB2P05107 769 aa9.65□□□□□ -0.86
CCDC66-211ENST00000468108 AMHR2Q16671 573 aa9.65□□□□□ -0.86
CCDC66-211ENST00000468108 KRTAP4-8Q9BYQ9 185 aa9.65□□□□□ -0.86
CCDC66-211ENST00000468108 ENAMQ9NRM1 1142 aa9.65□□□□□ -0.86
CCDC66-211ENST00000468108 SENP3-EIF4A1A0A087X0R7 540 aa9.64□□□□□ -0.87
CCDC66-211ENST00000468108 PHF20L1A8MW92 1017 aa9.64□□□□□ -0.87
CCDC66-211ENST00000468108 GAS6Q14393 721 aa9.64□□□□□ -0.87
CCDC66-211ENST00000468108 ERFEQ4G0M1 354 aa9.64□□□□□ -0.87
CCDC66-211ENST00000468108 AGBL1Q96MI9 1066 aa9.64□□□□□ -0.87
CCDC66-211ENST00000468108 INSM2Q96T92 566 aaPredicted RBP9.64□□□□□ -0.87
CCDC66-211ENST00000468108 RELBQ01201 579 aa9.63□□□□□ -0.87
CCDC66-211ENST00000468108 CSPP1Q1MSJ5 1256 aa9.63□□□□□ -0.87
CCDC66-211ENST00000468108 RIC3Q7Z5B4 369 aa9.63□□□□□ -0.87
CCDC66-211ENST00000468108 RNF217Q8TC41 542 aa9.63□□□□□ -0.87
CCDC66-211ENST00000468108 CNTNAP5Q8WYK1 1306 aa9.62□□□□□ -0.87
CCDC66-211ENST00000468108 PROCP04070 461 aa9.62□□□□□ -0.87
CCDC66-211ENST00000468108 BCANQ96GW7 911 aa9.62□□□□□ -0.87
CCDC66-211ENST00000468108 POLMQ9NP87 494 aaPredicted RBP9.62□□□□□ -0.87
CCDC66-211ENST00000468108 GALNT6Q8NCL4 622 aa9.61□□□□□ -0.87
CCDC66-211ENST00000468108 DCAF1Q9Y4B6 1507 aa9.6□□□□□ -0.87
CCDC66-211ENST00000468108 DHX9Q08211 1270 aaKnown RBP9.59□□□□□ -0.87
CCDC66-211ENST00000468108 GPKOWQ92917 476 aaPredicted RBP eCLIP9.59□□□□□ -0.87
CCDC66-211ENST00000468108 KCTD15Q96SI1 283 aaPredicted RBP9.59□□□□□ -0.87
CCDC66-211ENST00000468108 PODNQ7Z5L7 613 aa9.58□□□□□ -0.88
CCDC66-211ENST00000468108 BEND7Q8N7W2 519 aaPredicted RBP9.58□□□□□ -0.88
CCDC66-211ENST00000468108 CUEDC1Q9NWM3 386 aaPredicted RBP9.58□□□□□ -0.88
CCDC66-211ENST00000468108 SLC10A4Q96EP9 437 aa9.57□□□□□ -0.88
CCDC66-211ENST00000468108 ZNF395Q9H8N7 513 aaPredicted RBP9.57□□□□□ -0.88
CCDC66-211ENST00000468108 NUTM2BA6NNL0 878 aaPredicted RBP9.56□□□□□ -0.88
CCDC66-211ENST00000468108 NUTM2EB1AL46 878 aaPredicted RBP9.56□□□□□ -0.88
CCDC66-211ENST00000468108 K7ELQ4 463 aaPredicted RBP9.56□□□□□ -0.88
CCDC66-211ENST00000468108 QPCTQ16769 361 aa9.56□□□□□ -0.88
CCDC66-211ENST00000468108 NUTM2DQ5VT03 806 aaPredicted RBP9.56□□□□□ -0.88
CCDC66-211ENST00000468108 NUTM2AQ8IVF1 878 aaPredicted RBP9.56□□□□□ -0.88
CCDC66-211ENST00000468108 CDV3Q9UKY7 258 aaKnown RBP9.56□□□□□ -0.88
CCDC66-211ENST00000468108 FOXD4L5Q5VV16 416 aaPredicted RBP9.55□□□□□ -0.88
CCDC66-211ENST00000468108 HELBQ8NG08 1087 aaPredicted RBP9.55□□□□□ -0.88
CCDC66-211ENST00000468108 NEDD1Q8NHV4 660 aa9.55□□□□□ -0.88
CCDC66-211ENST00000468108 MBIPQ9NS73 344 aa9.55□□□□□ -0.88
CCDC66-211ENST00000468108 INTS6LQ5JSJ4 861 aaKnown RBP9.54□□□□□ -0.88
CCDC66-211ENST00000468108 BARGINQ6ZT62 677 aa9.54□□□□□ -0.88
CCDC66-211ENST00000468108 ZC3H15Q8WU90 426 aaKnown RBP9.54□□□□□ -0.88
CCDC66-211ENST00000468108 ARHGAP9Q9BRR9 750 aa9.54□□□□□ -0.88
CCDC66-211ENST00000468108 LIMD1Q9UGP4 676 aa9.54□□□□□ -0.88
CCDC66-211ENST00000468108 ABCC9O60706 1549 aa9.53□□□□□ -0.88
CCDC66-211ENST00000468108 LILRB3O75022 631 aa9.53□□□□□ -0.88
CCDC66-211ENST00000468108 BCRP11274 1271 aa9.53□□□□□ -0.88
CCDC66-211ENST00000468108 PARP9Q8IXQ6 854 aa9.53□□□□□ -0.88
CCDC66-211ENST00000468108 Q8N3U1 123 aa9.53□□□□□ -0.88
CCDC66-211ENST00000468108 IGF1RP08069 1367 aa9.52□□□□□ -0.88
CCDC66-211ENST00000468108 MYO15BQ96JP2 1530 aa9.51□□□□□ -0.89
CCDC66-211ENST00000468108 PDXDC2PQ6P474 469 aa9.51□□□□□ -0.89
CCDC66-211ENST00000468108 LYSMD3Q7Z3D4 306 aa9.51□□□□□ -0.89
CCDC66-211ENST00000468108 ZNF837Q96EG3 531 aaPredicted RBP9.51□□□□□ -0.89
CCDC66-211ENST00000468108 PSMG3-AS1Q96PY0 264 aa9.51□□□□□ -0.89
CCDC66-211ENST00000468108 GPR25O00155 361 aa9.5□□□□□ -0.89
CCDC66-211ENST00000468108 TUSC1Q2TAM9 212 aa9.5□□□□□ -0.89
CCDC66-211ENST00000468108 ZMYND10O75800 440 aa9.49□□□□□ -0.89
CCDC66-211ENST00000468108 ADH1AP07327 375 aa9.49□□□□□ -0.89
CCDC66-211ENST00000468108 MYSM1Q5VVJ2 828 aa9.49□□□□□ -0.89
CCDC66-211ENST00000468108 ZBTB33Q86T24 672 aa9.49□□□□□ -0.89
CCDC66-211ENST00000468108 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.48□□□□□ -0.89
CCDC66-211ENST00000468108 BAG6P46379 1132 aa9.48□□□□□ -0.89
CCDC66-211ENST00000468108 RTL5Q5HYW3 569 aaPredicted RBP9.48□□□□□ -0.89
CCDC66-211ENST00000468108 TRIM22Q8IYM9 498 aa9.48□□□□□ -0.89
CCDC66-211ENST00000468108 ACDQ96AP0 544 aa9.48□□□□□ -0.89
CCDC66-211ENST00000468108 GMCL1Q96IK5 515 aa9.48□□□□□ -0.89
CCDC66-211ENST00000468108 KRTAP9-2Q9BYQ4 174 aa9.48□□□□□ -0.89
CCDC66-211ENST00000468108 TMPRSS4Q9NRS4 437 aa9.48□□□□□ -0.89
CCDC66-211ENST00000468108 PTGIRP43119 386 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms