RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 ANKRD26Q9UPS8 1709 aa23.08■■□□□ 1.29
VARS2-204ENST00000467717 RTL1A6NKG5 1358 aa23.08■■□□□ 1.29
VARS2-204ENST00000467717 HOXC9P31274 260 aa23.07■■□□□ 1.28
VARS2-204ENST00000467717 MTHFSP49914 203 aa23.07■■□□□ 1.28
VARS2-204ENST00000467717 FNBP4Q8N3X1 1017 aaPredicted RBP23.07■■□□□ 1.28
VARS2-204ENST00000467717 FLT4P35916 1363 aa23.06■■□□□ 1.28
VARS2-204ENST00000467717 BTG4Q9NY30 223 aa23.06■■□□□ 1.28
VARS2-204ENST00000467717 AXIN2Q9Y2T1 843 aa23.06■■□□□ 1.28
VARS2-204ENST00000467717 SMG6Q86US8 1419 aaKnown RBP23.06■■□□□ 1.28
VARS2-204ENST00000467717 MYBBP1AQ9BQG0 1328 aaKnown RBP23.06■■□□□ 1.28
VARS2-204ENST00000467717 CDK12Q9NYV4 1490 aaPredicted RBP23.05■■□□□ 1.28
VARS2-204ENST00000467717 HSP90AB2PQ58FF8 381 aa23.04■■□□□ 1.28
VARS2-204ENST00000467717 BLMP54132 1417 aaPredicted RBP23.03■■□□□ 1.28
VARS2-204ENST00000467717 SLIT2O94813 1529 aa23.03■■□□□ 1.28
VARS2-204ENST00000467717 ABCC6O95255 1503 aa23.03■■□□□ 1.28
VARS2-204ENST00000467717 RXRBP28702 533 aa23.02■■□□□ 1.28
VARS2-204ENST00000467717 AFF2P51816 1311 aa23.02■■□□□ 1.28
VARS2-204ENST00000467717 INSRP06213 1382 aa23.01■■□□□ 1.27
VARS2-204ENST00000467717 EVA1CP58658 441 aa23.01■■□□□ 1.27
VARS2-204ENST00000467717 UNC5CLQ8IV45 518 aa23.01■■□□□ 1.27
VARS2-204ENST00000467717 USP21Q9UK80 565 aa23.01■■□□□ 1.27
VARS2-204ENST00000467717 ANKRD24Q8TF21 1146 aa23■■□□□ 1.27
VARS2-204ENST00000467717 CAMTA1Q9Y6Y1 1673 aa23■■□□□ 1.27
VARS2-204ENST00000467717 COL14A1Q05707 1796 aaKnown RBP22.99■■□□□ 1.27
VARS2-204ENST00000467717 CFAP53Q96M91 514 aa22.99■■□□□ 1.27
VARS2-204ENST00000467717 STRN4Q9NRL3 753 aa22.99■■□□□ 1.27
VARS2-204ENST00000467717 ERBB3P21860 1342 aa22.99■■□□□ 1.27
VARS2-204ENST00000467717 LTV1Q96GA3 475 aaPredicted RBP22.98■■□□□ 1.27
VARS2-204ENST00000467717 BCL9LQ86UU0 1499 aa22.98■■□□□ 1.27
VARS2-204ENST00000467717 CSB-PGBD3P0DP91 1061 aa22.97■■□□□ 1.27
VARS2-204ENST00000467717 SRCAPQ6ZRS2 3230 aa22.97■■□□□ 1.27
VARS2-204ENST00000467717 COL5A2P05997 1499 aaPredicted RBP22.97■■□□□ 1.27
VARS2-204ENST00000467717 LMO7Q8WWI1 1683 aa22.97■■□□□ 1.27
VARS2-204ENST00000467717 WDR17Q8IZU2 1322 aa22.96■■□□□ 1.27
VARS2-204ENST00000467717 COL18A1P39060 1754 aa22.95■■□□□ 1.26
VARS2-204ENST00000467717 EIF4A2Q14240 407 aaKnown RBP22.95■■□□□ 1.26
VARS2-204ENST00000467717 PEAK1Q9H792 1746 aa22.95■■□□□ 1.26
VARS2-204ENST00000467717 DIAPH1O60610 1272 aaKnown RBP22.94■■□□□ 1.26
VARS2-204ENST00000467717 VPS72Q15906 364 aa22.94■■□□□ 1.26
VARS2-204ENST00000467717 LARP1Q6PKG0 1096 aaKnown RBP22.94■■□□□ 1.26
VARS2-204ENST00000467717 LTN1O94822 1766 aa22.94■■□□□ 1.26
VARS2-204ENST00000467717 IL13P35225 146 aa22.93■■□□□ 1.26
VARS2-204ENST00000467717 TOM1L2Q6ZVM7 507 aa22.93■■□□□ 1.26
VARS2-204ENST00000467717 TRPC5Q9UL62 973 aaPredicted RBP22.93■■□□□ 1.26
VARS2-204ENST00000467717 MAP2P11137 1827 aaKnown RBP22.92■■□□□ 1.26
VARS2-204ENST00000467717 NLRP2Q9NX02 1062 aa22.91■■□□□ 1.26
VARS2-204ENST00000467717 RGS12O14924 1447 aa22.91■■□□□ 1.26
VARS2-204ENST00000467717 CARD10Q9BWT7 1032 aa22.9■■□□□ 1.26
VARS2-204ENST00000467717 QTRT2Q9H974 415 aaKnown RBP22.9■■□□□ 1.26
VARS2-204ENST00000467717 CCDC9Q9Y3X0 531 aaKnown RBP22.9■■□□□ 1.26
VARS2-204ENST00000467717 CRB1P82279 1406 aa22.9■■□□□ 1.26
VARS2-204ENST00000467717 NWD2Q9ULI1 1742 aa22.89■■□□□ 1.26
VARS2-204ENST00000467717 NUDCQ9Y266 331 aa22.89■■□□□ 1.25
VARS2-204ENST00000467717 COL3A1P02461 1466 aaPredicted RBP22.89■■□□□ 1.25
VARS2-204ENST00000467717 PLCH1Q4KWH8 1693 aa22.89■■□□□ 1.25
VARS2-204ENST00000467717 SPATA31A5Q5VU36 1347 aa22.88■■□□□ 1.25
VARS2-204ENST00000467717 SPATA31A7Q8IWB4 1347 aa22.88■■□□□ 1.25
VARS2-204ENST00000467717 NBPF6Q5VWK0 638 aa22.88■■□□□ 1.25
VARS2-204ENST00000467717 NBPF4Q96M43 638 aa22.88■■□□□ 1.25
VARS2-204ENST00000467717 EYA1Q99502 592 aa22.88■■□□□ 1.25
VARS2-204ENST00000467717 ATRNO75882 1429 aa22.88■■□□□ 1.25
VARS2-204ENST00000467717 SPATA31A1Q5TZJ5 1347 aa22.87■■□□□ 1.25
VARS2-204ENST00000467717 MIER1Q8N108 512 aa22.86■■□□□ 1.25
VARS2-204ENST00000467717 GJD4Q96KN9 370 aaPredicted RBP22.86■■□□□ 1.25
VARS2-204ENST00000467717 USP35Q9P2H5 1018 aa22.86■■□□□ 1.25
VARS2-204ENST00000467717 U2SURPO15042 1029 aaKnown RBP22.85■■□□□ 1.25
VARS2-204ENST00000467717 TCP11L2Q8N4U5 519 aa22.85■■□□□ 1.25
VARS2-204ENST00000467717 NRAPQ86VF7 1730 aa22.85■■□□□ 1.25
VARS2-204ENST00000467717 IGSF1Q8N6C5 1336 aa22.84■■□□□ 1.25
VARS2-204ENST00000467717 CCDC184Q52MB2 194 aa22.84■■□□□ 1.25
VARS2-204ENST00000467717 MRS2Q9HD23 443 aa22.84■■□□□ 1.25
VARS2-204ENST00000467717 THRAP3Q9Y2W1 955 aaKnown RBP22.84■■□□□ 1.25
VARS2-204ENST00000467717 CCER2I3L3R5 266 aa22.83■■□□□ 1.25
VARS2-204ENST00000467717 USHBP1Q8N6Y0 703 aa22.83■■□□□ 1.25
VARS2-204ENST00000467717 RBM6P78332 1123 aaKnown RBP22.82■■□□□ 1.24
VARS2-204ENST00000467717 U2AF1L5P0DN76 240 aaPredicted RBP22.81■■□□□ 1.24
VARS2-204ENST00000467717 U2AF1Q01081 240 aaKnown RBP eCLIP22.81■■□□□ 1.24
VARS2-204ENST00000467717 SULT6B1Q6IMI4 303 aa22.81■■□□□ 1.24
VARS2-204ENST00000467717 BARGINQ6ZT62 677 aa22.81■■□□□ 1.24
VARS2-204ENST00000467717 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.81■■□□□ 1.24
VARS2-204ENST00000467717 CDCA7Q9BWT1 371 aaPredicted RBP22.79■■□□□ 1.24
VARS2-204ENST00000467717 NCAPD2Q15021 1401 aa22.79■■□□□ 1.24
VARS2-204ENST00000467717 RGPD5Q99666 1765 aa22.78■■□□□ 1.24
VARS2-204ENST00000467717 WDR43Q15061 677 aaKnown RBP eCLIP22.78■■□□□ 1.24
VARS2-204ENST00000467717 FAM98CQ17RN3 349 aaKnown RBP22.78■■□□□ 1.24
VARS2-204ENST00000467717 AEBP1Q8IUX7 1158 aa22.78■■□□□ 1.24
VARS2-204ENST00000467717 KDRP35968 1356 aa22.77■■□□□ 1.24
VARS2-204ENST00000467717 HMOX1P09601 288 aa22.77■■□□□ 1.24
VARS2-204ENST00000467717 IL2RBP14784 551 aa22.77■■□□□ 1.24
VARS2-204ENST00000467717 RAPGEF4Q8WZA2 1011 aa22.77■■□□□ 1.24
VARS2-204ENST00000467717 ONECUT3O60422 494 aaPredicted RBP22.76■■□□□ 1.23
VARS2-204ENST00000467717 PNISRQ8TF01 805 aaKnown RBP22.76■■□□□ 1.23
VARS2-204ENST00000467717 FAM208AQ9UK61 1670 aaKnown RBP22.75■■□□□ 1.23
VARS2-204ENST00000467717 FCHSD2O94868 740 aa22.75■■□□□ 1.23
VARS2-204ENST00000467717 TATP17735 454 aaPredicted RBP22.74■■□□□ 1.23
VARS2-204ENST00000467717 DISP2A7MBM2 1401 aa22.74■■□□□ 1.23
VARS2-204ENST00000467717 GLI3P10071 1580 aa22.73■■□□□ 1.23
VARS2-204ENST00000467717 RSPH6AQ9H0K4 717 aa22.73■■□□□ 1.23
VARS2-204ENST00000467717 ADAMTS8Q9UP79 889 aa22.72■■□□□ 1.23
VARS2-204ENST00000467717 A0A0G2JS52 829 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms