RNA–Protein interactions for RNA: ENST00000467323.1

MSH2-205, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 313 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-205ENST00000467323 KCNH2Q12809 1159 aa6.78□□□□□ -1.32
MSH2-205ENST00000467323 ZNF211Q13398 564 aaPredicted RBP6.78□□□□□ -1.32
MSH2-205ENST00000467323 FAM98CQ17RN3 349 aaKnown RBP6.78□□□□□ -1.32
MSH2-205ENST00000467323 TSNAXIP1Q2TAA8 658 aa6.78□□□□□ -1.32
MSH2-205ENST00000467323 EAPPQ56P03 285 aaPredicted RBP6.78□□□□□ -1.32
MSH2-205ENST00000467323 MORN1Q5T089 497 aa6.78□□□□□ -1.32
MSH2-205ENST00000467323 SIX5Q8N196 739 aa6.78□□□□□ -1.32
MSH2-205ENST00000467323 RABGEF1Q9UJ41 708 aa6.78□□□□□ -1.32
MSH2-205ENST00000467323 CHIC2Q9UKJ5 165 aa6.78□□□□□ -1.32
MSH2-205ENST00000467323 ERCC5P28715 1186 aaPredicted RBP6.77□□□□□ -1.33
MSH2-205ENST00000467323 ITGAEP38570 1179 aa6.77□□□□□ -1.33
MSH2-205ENST00000467323 SF3B2Q13435 895 aaKnown RBP6.77□□□□□ -1.33
MSH2-205ENST00000467323 PDXDC2PQ6P474 469 aa6.77□□□□□ -1.33
MSH2-205ENST00000467323 USB1Q9BQ65 265 aaKnown RBP6.77□□□□□ -1.33
MSH2-205ENST00000467323 ZBED2Q9BTP6 218 aa6.77□□□□□ -1.33
MSH2-205ENST00000467323 SLC27A5Q9Y2P5 690 aa6.77□□□□□ -1.33
MSH2-205ENST00000467323 RNF40O75150 1001 aa6.76□□□□□ -1.33
MSH2-205ENST00000467323 OCLNQ16625 522 aa6.76□□□□□ -1.33
MSH2-205ENST00000467323 PTPRNQ16849 979 aa6.76□□□□□ -1.33
MSH2-205ENST00000467323 TRAF7Q6Q0C0 670 aa6.76□□□□□ -1.33
MSH2-205ENST00000467323 SEPT9Q9UHD8 586 aaPredicted RBP6.76□□□□□ -1.33
MSH2-205ENST00000467323 SCAMP3O14828 347 aaKnown RBP6.75□□□□□ -1.33
MSH2-205ENST00000467323 CTHP32929 405 aa6.75□□□□□ -1.33
MSH2-205ENST00000467323 FKBP4Q02790 459 aaKnown RBP eCLIP6.75□□□□□ -1.33
MSH2-205ENST00000467323 NBPF14Q5TI25 921 aa6.75□□□□□ -1.33
MSH2-205ENST00000467323 SAMD7Q7Z3H4 446 aa6.75□□□□□ -1.33
MSH2-205ENST00000467323 RGL4Q8IZJ4 473 aa6.75□□□□□ -1.33
MSH2-205ENST00000467323 PRIMPOLQ96LW4 560 aa6.75□□□□□ -1.33
MSH2-205ENST00000467323 PRR14Q9BWN1 585 aa6.75□□□□□ -1.33
MSH2-205ENST00000467323 ANO2Q9NQ90 1003 aa6.75□□□□□ -1.33
MSH2-205ENST00000467323 MAP10Q9P2G4 905 aa6.75□□□□□ -1.33
MSH2-205ENST00000467323 SALL2Q9Y467 1007 aaPredicted RBP6.75□□□□□ -1.33
MSH2-205ENST00000467323 FGD1P98174 961 aa6.74□□□□□ -1.33
MSH2-205ENST00000467323 MYT1Q01538 1121 aa6.74□□□□□ -1.33
MSH2-205ENST00000467323 TAGLNQ01995 201 aaKnown RBP6.74□□□□□ -1.33
MSH2-205ENST00000467323 GTF3C2Q8WUA4 911 aaPredicted RBP6.74□□□□□ -1.33
MSH2-205ENST00000467323 DOLKQ9UPQ8 538 aa6.74□□□□□ -1.33
MSH2-205ENST00000467323 CADPSQ9ULU8 1353 aa6.73□□□□□ -1.33
MSH2-205ENST00000467323 ACTN4O43707 911 aaKnown RBP6.73□□□□□ -1.33
MSH2-205ENST00000467323 PTCD1O75127 700 aaKnown RBP6.73□□□□□ -1.33
MSH2-205ENST00000467323 GTF2IP78347 998 aa6.73□□□□□ -1.33
MSH2-205ENST00000467323 PUS10Q3MIT2 529 aaKnown RBP6.73□□□□□ -1.33
MSH2-205ENST00000467323 CCDC102BQ68D86 513 aa6.73□□□□□ -1.33
MSH2-205ENST00000467323 ZBTB7BO15156 539 aaPredicted RBP6.72□□□□□ -1.33
MSH2-205ENST00000467323 DKK1O94907 266 aa6.72□□□□□ -1.33
MSH2-205ENST00000467323 JUNDP17535 347 aa6.72□□□□□ -1.33
MSH2-205ENST00000467323 ARHGAP4P98171 946 aa6.72□□□□□ -1.33
MSH2-205ENST00000467323 RNF19BQ6ZMZ0 732 aa6.72□□□□□ -1.33
MSH2-205ENST00000467323 LAPTM4BQ86VI4 370 aa6.72□□□□□ -1.33
MSH2-205ENST00000467323 SLC4A5Q9BY07 1137 aa6.72□□□□□ -1.33
MSH2-205ENST00000467323 BACH2Q9BYV9 841 aa6.72□□□□□ -1.33
MSH2-205ENST00000467323 FMNL1O95466 1100 aaPredicted RBP6.71□□□□□ -1.34
MSH2-205ENST00000467323 PSME1Q06323 249 aa6.71□□□□□ -1.34
MSH2-205ENST00000467323 ZBTB33Q86T24 672 aa6.71□□□□□ -1.34
MSH2-205ENST00000467323 ANKRD13AQ8IZ07 590 aa6.71□□□□□ -1.34
MSH2-205ENST00000467323 TPCN2Q8NHX9 752 aa6.71□□□□□ -1.34
MSH2-205ENST00000467323 HINFPQ9BQA5 517 aa6.71□□□□□ -1.34
MSH2-205ENST00000467323 ARHGAP9Q9BRR9 750 aa6.71□□□□□ -1.34
MSH2-205ENST00000467323 KIAA1024Q9UPX6 916 aa6.71□□□□□ -1.34
MSH2-205ENST00000467323 DNMT3AQ9Y6K1 912 aaPredicted RBP6.71□□□□□ -1.34
MSH2-205ENST00000467323 HDLBPQ00341 1268 aaKnown RBP6.7□□□□□ -1.34
MSH2-205ENST00000467323 MRPL58Q14197 206 aaKnown RBP6.7□□□□□ -1.34
MSH2-205ENST00000467323 ECM1Q16610 540 aa6.7□□□□□ -1.34
MSH2-205ENST00000467323 OXLD1Q5BKU9 147 aa6.7□□□□□ -1.34
MSH2-205ENST00000467323 RNF20Q5VTR2 975 aa6.7□□□□□ -1.34
MSH2-205ENST00000467323 BRICD5Q6PL45 260 aa6.7□□□□□ -1.34
MSH2-205ENST00000467323 BLOC1S3Q6QNY0 202 aa6.7□□□□□ -1.34
MSH2-205ENST00000467323 DZIP3Q86Y13 1208 aaKnown RBP6.7□□□□□ -1.34
MSH2-205ENST00000467323 ADAM32Q8TC27 787 aa6.7□□□□□ -1.34
MSH2-205ENST00000467323 SFI1A8K8P3 1242 aa6.69□□□□□ -1.34
MSH2-205ENST00000467323 FAM13AO94988 1023 aa6.69□□□□□ -1.34
MSH2-205ENST00000467323 CCNYL3P0C7X3 344 aa6.69□□□□□ -1.34
MSH2-205ENST00000467323 PIK3R5Q8WYR1 880 aa6.69□□□□□ -1.34
MSH2-205ENST00000467323 COL26A1Q96A83 441 aa6.69□□□□□ -1.34
MSH2-205ENST00000467323 OCSTAMPQ9BR26 566 aa6.69□□□□□ -1.34
MSH2-205ENST00000467323 MKNK1Q9BUB5 465 aa6.69□□□□□ -1.34
MSH2-205ENST00000467323 SEPT3Q9UH03 358 aa6.69□□□□□ -1.34
MSH2-205ENST00000467323 XPCQ01831 940 aaPredicted RBP6.68□□□□□ -1.34
MSH2-205ENST00000467323 TSGA10IPQ3SY00 556 aa6.68□□□□□ -1.34
MSH2-205ENST00000467323 CCDC85AQ96PX6 553 aaPredicted RBP6.68□□□□□ -1.34
MSH2-205ENST00000467323 RBCK1Q9BYM8 510 aa6.68□□□□□ -1.34
MSH2-205ENST00000467323 NBPF3Q9H094 633 aa6.68□□□□□ -1.34
MSH2-205ENST00000467323 EVA1BQ9NVM1 165 aa6.68□□□□□ -1.34
MSH2-205ENST00000467323 M0R2N6 131 aa6.67□□□□□ -1.34
MSH2-205ENST00000467323 NDUFB5O43674 189 aa6.67□□□□□ -1.34
MSH2-205ENST00000467323 P4HBP07237 508 aaKnown RBP6.67□□□□□ -1.34
MSH2-205ENST00000467323 WEE1P30291 646 aa6.67□□□□□ -1.34
MSH2-205ENST00000467323 USP4Q13107 963 aa6.67□□□□□ -1.34
MSH2-205ENST00000467323 DPH6Q7L8W6 267 aa6.67□□□□□ -1.34
MSH2-205ENST00000467323 HELQQ8TDG4 1101 aa6.67□□□□□ -1.34
MSH2-205ENST00000467323 CITED4Q96RK1 184 aa6.67□□□□□ -1.34
MSH2-205ENST00000467323 TANGO6Q9C0B7 1094 aa6.67□□□□□ -1.34
MSH2-205ENST00000467323 MRS2Q9HD23 443 aa6.67□□□□□ -1.34
MSH2-205ENST00000467323 ANKRD62A6NC57 917 aa6.66□□□□□ -1.34
MSH2-205ENST00000467323 NR1I2O75469 434 aa6.66□□□□□ -1.34
MSH2-205ENST00000467323 HOXB1P14653 301 aaPredicted RBP6.66□□□□□ -1.34
MSH2-205ENST00000467323 PSEN2P49810 448 aa6.66□□□□□ -1.34
MSH2-205ENST00000467323 MTMR3Q13615 1198 aa6.66□□□□□ -1.34
MSH2-205ENST00000467323 NOP9Q86U38 636 aaKnown RBP6.66□□□□□ -1.34
MSH2-205ENST00000467323 TMEM87AQ8NBN3 555 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms