RNA–Protein interactions for RNA: ENST00000467307.1

USP30-204, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 3

Gene USP30, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-204ENST00000467307 SIRT1Q96EB6 747 aa8.34□□□□□ -1.07
USP30-204ENST00000467307 TBC1D2Q9BYX2 928 aa8.34□□□□□ -1.07
USP30-204ENST00000467307 SOS1Q07889 1333 aaPredicted RBP8.33□□□□□ -1.08
USP30-204ENST00000467307 DDIT3P35638 169 aa8.33□□□□□ -1.08
USP30-204ENST00000467307 MTHFSP49914 203 aa8.33□□□□□ -1.08
USP30-204ENST00000467307 CPSF1Q10570 1443 aaKnown RBP8.33□□□□□ -1.08
USP30-204ENST00000467307 HDGFL2Q7Z4V5 671 aaPredicted RBP8.33□□□□□ -1.08
USP30-204ENST00000467307 ANP32BQ92688 251 aaKnown RBP8.33□□□□□ -1.08
USP30-204ENST00000467307 PLEKHF1Q96S99 279 aa8.33□□□□□ -1.08
USP30-204ENST00000467307 CWC22Q9HCG8 908 aaKnown RBP8.33□□□□□ -1.08
USP30-204ENST00000467307 ZBTB40Q9NUA8 1239 aa8.33□□□□□ -1.08
USP30-204ENST00000467307 KIF20BQ96Q89 1820 aa8.32□□□□□ -1.08
USP30-204ENST00000467307 TMPOP42166 694 aaKnown RBP8.32□□□□□ -1.08
USP30-204ENST00000467307 NUCB2P80303 420 aa8.32□□□□□ -1.08
USP30-204ENST00000467307 NUCB1Q02818 461 aa8.32□□□□□ -1.08
USP30-204ENST00000467307 CCDC146Q8IYE0 955 aa8.32□□□□□ -1.08
USP30-204ENST00000467307 PROM2Q8N271 834 aa8.32□□□□□ -1.08
USP30-204ENST00000467307 UBE2Q2Q8WVN8 375 aa8.32□□□□□ -1.08
USP30-204ENST00000467307 API5Q9BZZ5 524 aaKnown RBP8.32□□□□□ -1.08
USP30-204ENST00000467307 METRNQ9UJH8 293 aa8.32□□□□□ -1.08
USP30-204ENST00000467307 AGLP35573 1532 aa8.32□□□□□ -1.08
USP30-204ENST00000467307 CDK12Q9NYV4 1490 aaPredicted RBP8.32□□□□□ -1.08
USP30-204ENST00000467307 FAM135BQ49AJ0 1406 aa8.31□□□□□ -1.08
USP30-204ENST00000467307 CD109Q6YHK3 1445 aa8.31□□□□□ -1.08
USP30-204ENST00000467307 RRP9O43818 475 aaKnown RBP8.31□□□□□ -1.08
USP30-204ENST00000467307 NPM1P06748 294 aaKnown RBP eCLIP8.31□□□□□ -1.08
USP30-204ENST00000467307 PDIA4P13667 645 aaKnown RBP8.31□□□□□ -1.08
USP30-204ENST00000467307 MCM2P49736 904 aa8.31□□□□□ -1.08
USP30-204ENST00000467307 GNAI1P63096 354 aa8.31□□□□□ -1.08
USP30-204ENST00000467307 CHMP4AQ9BY43 222 aa8.31□□□□□ -1.08
USP30-204ENST00000467307 SMC4Q9NTJ3 1288 aa8.31□□□□□ -1.08
USP30-204ENST00000467307 IFT57Q9NWB7 429 aa8.31□□□□□ -1.08
USP30-204ENST00000467307 PCDHB15Q9Y5E8 787 aa8.31□□□□□ -1.08
USP30-204ENST00000467307 TPM2P07951 284 aa8.3□□□□□ -1.08
USP30-204ENST00000467307 U2AF1L5P0DN76 240 aaPredicted RBP8.3□□□□□ -1.08
USP30-204ENST00000467307 TRIM27P14373 513 aa8.3□□□□□ -1.08
USP30-204ENST00000467307 MCM5P33992 734 aa8.3□□□□□ -1.08
USP30-204ENST00000467307 U2AF1Q01081 240 aaKnown RBP eCLIP8.3□□□□□ -1.08
USP30-204ENST00000467307 RAB3GAP1Q15042 981 aa8.3□□□□□ -1.08
USP30-204ENST00000467307 RABEP1Q15276 862 aa8.3□□□□□ -1.08
USP30-204ENST00000467307 CASC1Q6TDU7 716 aa8.3□□□□□ -1.08
USP30-204ENST00000467307 MTERF4Q7Z6M4 381 aaKnown RBP8.3□□□□□ -1.08
USP30-204ENST00000467307 PANK1Q8TE04 598 aa8.3□□□□□ -1.08
USP30-204ENST00000467307 MAP7D2Q96T17 732 aa8.3□□□□□ -1.08
USP30-204ENST00000467307 PTPRMP28827 1452 aa8.3□□□□□ -1.08
USP30-204ENST00000467307 EDC4Q6P2E9 1401 aaKnown RBP8.29□□□□□ -1.08
USP30-204ENST00000467307 TMEM131LA2VDJ0 1609 aa8.29□□□□□ -1.08
USP30-204ENST00000467307 TRAK2O60296 914 aa8.29□□□□□ -1.08
USP30-204ENST00000467307 DIAPH1O60610 1272 aaKnown RBP8.29□□□□□ -1.08
USP30-204ENST00000467307 CCDC173Q0VFZ6 552 aa8.29□□□□□ -1.08
USP30-204ENST00000467307 PCDH10Q9P2E7 1040 aa8.29□□□□□ -1.08
USP30-204ENST00000467307 A0A1W2PP64 1363 aa8.29□□□□□ -1.08
USP30-204ENST00000467307 DIP2CQ9Y2E4 1556 aa8.29□□□□□ -1.08
USP30-204ENST00000467307 KNDC1Q76NI1 1749 aa8.29□□□□□ -1.08
USP30-204ENST00000467307 ARHGEF10O15013 1369 aa8.28□□□□□ -1.08
USP30-204ENST00000467307 MNX1P50219 401 aaPredicted RBP8.28□□□□□ -1.08
USP30-204ENST00000467307 KLHL40Q2TBA0 621 aa8.28□□□□□ -1.08
USP30-204ENST00000467307 ASTLQ6HA08 431 aaPredicted RBP8.28□□□□□ -1.08
USP30-204ENST00000467307 CHD1LQ86WJ1 897 aa8.28□□□□□ -1.08
USP30-204ENST00000467307 TRIM44Q96DX7 344 aaPredicted RBP8.28□□□□□ -1.08
USP30-204ENST00000467307 MS4A3Q96HJ5 214 aa8.28□□□□□ -1.08
USP30-204ENST00000467307 SLC12A5Q9H2X9 1139 aa8.28□□□□□ -1.08
USP30-204ENST00000467307 BRPF3Q9ULD4 1205 aa8.28□□□□□ -1.08
USP30-204ENST00000467307 LRRC7Q96NW7 1537 aa8.28□□□□□ -1.08
USP30-204ENST00000467307 TECPR2O15040 1411 aa8.28□□□□□ -1.08
USP30-204ENST00000467307 YTHDC2Q9H6S0 1430 aaKnown RBP8.28□□□□□ -1.08
USP30-204ENST00000467307 ABCC4O15439 1325 aa8.28□□□□□ -1.08
USP30-204ENST00000467307 PREX1Q8TCU6 1659 aa8.27□□□□□ -1.08
USP30-204ENST00000467307 KIAA0232Q92628 1395 aa8.27□□□□□ -1.09
USP30-204ENST00000467307 K7ELQ4 463 aaPredicted RBP8.27□□□□□ -1.09
USP30-204ENST00000467307 ATMINO43313 823 aaPredicted RBP8.27□□□□□ -1.09
USP30-204ENST00000467307 RLBP1P12271 317 aa8.27□□□□□ -1.09
USP30-204ENST00000467307 HDGFP51858 240 aaKnown RBP8.27□□□□□ -1.09
USP30-204ENST00000467307 RPAP2Q8IXW5 612 aaPredicted RBP8.27□□□□□ -1.09
USP30-204ENST00000467307 FAM163AQ96GL9 167 aaPredicted RBP8.27□□□□□ -1.09
USP30-204ENST00000467307 GRPEL1Q9HAV7 217 aa8.27□□□□□ -1.09
USP30-204ENST00000467307 PTPRCP08575 1304 aa8.27□□□□□ -1.09
USP30-204ENST00000467307 CDC45O75419 566 aa8.26□□□□□ -1.09
USP30-204ENST00000467307 ITPRIPQ8IWB1 547 aa8.26□□□□□ -1.09
USP30-204ENST00000467307 SSH1Q8WYL5 1049 aa8.26□□□□□ -1.09
USP30-204ENST00000467307 IL17RAQ96F46 866 aa8.26□□□□□ -1.09
USP30-204ENST00000467307 PPP1R9BQ96SB3 815 aa8.26□□□□□ -1.09
USP30-204ENST00000467307 TRIM35Q9UPQ4 493 aa8.26□□□□□ -1.09
USP30-204ENST00000467307 TRAK1Q9UPV9 953 aa8.26□□□□□ -1.09
USP30-204ENST00000467307 SSH2Q76I76 1423 aa8.26□□□□□ -1.09
USP30-204ENST00000467307 RICTORQ6R327 1708 aa8.26□□□□□ -1.09
USP30-204ENST00000467307 CD163L1Q9NR16 1453 aa8.26□□□□□ -1.09
USP30-204ENST00000467307 REC8O95072 547 aa8.25□□□□□ -1.09
USP30-204ENST00000467307 ZNF853P0CG23 659 aa8.25□□□□□ -1.09
USP30-204ENST00000467307 XRCC6P12956 609 aaKnown RBP eCLIP8.25□□□□□ -1.09
USP30-204ENST00000467307 ZNF445P59923 1031 aa8.25□□□□□ -1.09
USP30-204ENST00000467307 NFE2L2Q16236 605 aa8.25□□□□□ -1.09
USP30-204ENST00000467307 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.25□□□□□ -1.09
USP30-204ENST00000467307 SLKQ9H2G2 1235 aaPredicted RBP8.25□□□□□ -1.09
USP30-204ENST00000467307 POGKQ9P215 609 aa8.25□□□□□ -1.09
USP30-204ENST00000467307 CACNA1FO60840 1977 aa8.24□□□□□ -1.09
USP30-204ENST00000467307 SPATA31D1Q6ZQQ2 1576 aa8.24□□□□□ -1.09
USP30-204ENST00000467307 ESPNB1AK53 854 aa8.24□□□□□ -1.09
USP30-204ENST00000467307 FYB1O15117 783 aa8.24□□□□□ -1.09
USP30-204ENST00000467307 ZBTB7BO15156 539 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms