RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 LTN1O94822 1766 aa9.29□□□□□ -0.92
UBXN4-205ENST00000467065 TNS1Q9HBL0 1735 aaKnown RBP9.29□□□□□ -0.92
UBXN4-205ENST00000467065 CHRNA2Q15822 529 aa9.29□□□□□ -0.92
UBXN4-205ENST00000467065 ABTB2Q8N961 1025 aa9.29□□□□□ -0.92
UBXN4-205ENST00000467065 SLIT3O75094 1523 aa9.29□□□□□ -0.92
UBXN4-205ENST00000467065 COL18A1P39060 1754 aa9.29□□□□□ -0.92
UBXN4-205ENST00000467065 USP54Q70EL1 1684 aa9.29□□□□□ -0.92
UBXN4-205ENST00000467065 A0A0G2JS52 829 aa9.28□□□□□ -0.92
UBXN4-205ENST00000467065 ZC3H6P61129 1189 aaKnown RBP9.28□□□□□ -0.92
UBXN4-205ENST00000467065 MYT1Q01538 1121 aa9.28□□□□□ -0.92
UBXN4-205ENST00000467065 SEPT12Q8IYM1 358 aa9.28□□□□□ -0.92
UBXN4-205ENST00000467065 CARD11Q9BXL7 1154 aa9.28□□□□□ -0.92
UBXN4-205ENST00000467065 CABP1Q9NZU7 370 aa9.28□□□□□ -0.92
UBXN4-205ENST00000467065 CAMTA1Q9Y6Y1 1673 aa9.28□□□□□ -0.92
UBXN4-205ENST00000467065 USP19O94966 1318 aa9.28□□□□□ -0.92
UBXN4-205ENST00000467065 FAM98CQ17RN3 349 aaKnown RBP9.27□□□□□ -0.93
UBXN4-205ENST00000467065 SSH2Q76I76 1423 aa9.27□□□□□ -0.93
UBXN4-205ENST00000467065 SBNO2Q9Y2G9 1366 aa9.26□□□□□ -0.93
UBXN4-205ENST00000467065 PARP4Q9UKK3 1724 aaKnown RBP9.26□□□□□ -0.93
UBXN4-205ENST00000467065 SLC24A1O60721 1099 aa9.26□□□□□ -0.93
UBXN4-205ENST00000467065 STRN4Q9NRL3 753 aa9.26□□□□□ -0.93
UBXN4-205ENST00000467065 SPATA31A5Q5VU36 1347 aa9.26□□□□□ -0.93
UBXN4-205ENST00000467065 SPATA31A7Q8IWB4 1347 aa9.26□□□□□ -0.93
UBXN4-205ENST00000467065 BRD4O60885 1362 aaPredicted RBP9.25□□□□□ -0.93
UBXN4-205ENST00000467065 BLMP54132 1417 aaPredicted RBP9.25□□□□□ -0.93
UBXN4-205ENST00000467065 ZBTB7CA1YPR0 619 aa9.25□□□□□ -0.93
UBXN4-205ENST00000467065 NLRP13Q86W25 1043 aa9.25□□□□□ -0.93
UBXN4-205ENST00000467065 CPDO75976 1380 aa9.24□□□□□ -0.93
UBXN4-205ENST00000467065 SBF2Q86WG5 1849 aa9.24□□□□□ -0.93
UBXN4-205ENST00000467065 LRRC37A3O60309 1634 aa9.24□□□□□ -0.93
UBXN4-205ENST00000467065 CPSF1Q10570 1443 aaKnown RBP9.24□□□□□ -0.93
UBXN4-205ENST00000467065 COL5A2P05997 1499 aaPredicted RBP9.24□□□□□ -0.93
UBXN4-205ENST00000467065 CD163L1Q9NR16 1453 aa9.24□□□□□ -0.93
UBXN4-205ENST00000467065 ONECUT3O60422 494 aaPredicted RBP9.24□□□□□ -0.93
UBXN4-205ENST00000467065 KRT27Q7Z3Y8 459 aa9.24□□□□□ -0.93
UBXN4-205ENST00000467065 NFAT5O94916 1531 aa9.24□□□□□ -0.93
UBXN4-205ENST00000467065 SPATA31A1Q5TZJ5 1347 aa9.24□□□□□ -0.93
UBXN4-205ENST00000467065 KTN1Q86UP2 1357 aaKnown RBP9.24□□□□□ -0.93
UBXN4-205ENST00000467065 GCP02774 474 aa9.23□□□□□ -0.93
UBXN4-205ENST00000467065 NLRP6P59044 892 aa9.23□□□□□ -0.93
UBXN4-205ENST00000467065 FAM182BQ5T319 152 aa9.23□□□□□ -0.93
UBXN4-205ENST00000467065 USP35Q9P2H5 1018 aa9.23□□□□□ -0.93
UBXN4-205ENST00000467065 KIF20BQ96Q89 1820 aa9.23□□□□□ -0.93
UBXN4-205ENST00000467065 TTC21BQ7Z4L5 1316 aa9.23□□□□□ -0.93
UBXN4-205ENST00000467065 MYOM1P52179 1685 aa9.23□□□□□ -0.93
UBXN4-205ENST00000467065 SOX12O15370 315 aa9.22□□□□□ -0.93
UBXN4-205ENST00000467065 EVA1CP58658 441 aa9.22□□□□□ -0.93
UBXN4-205ENST00000467065 LARP1Q6PKG0 1096 aaKnown RBP9.22□□□□□ -0.93
UBXN4-205ENST00000467065 ZNF579Q8NAF0 562 aaKnown RBP9.22□□□□□ -0.93
UBXN4-205ENST00000467065 SRCAPQ6ZRS2 3230 aa9.22□□□□□ -0.93
UBXN4-205ENST00000467065 RREB1Q92766 1687 aa9.21□□□□□ -0.93
UBXN4-205ENST00000467065 DEFB132Q7Z7B7 95 aa9.21□□□□□ -0.94
UBXN4-205ENST00000467065 CCDC125Q86Z20 511 aa9.21□□□□□ -0.94
UBXN4-205ENST00000467065 TTC21AQ8NDW8 1320 aa9.21□□□□□ -0.94
UBXN4-205ENST00000467065 RGPD2P0DJD1 1756 aa9.21□□□□□ -0.94
UBXN4-205ENST00000467065 PEAK1Q9H792 1746 aa9.2□□□□□ -0.94
UBXN4-205ENST00000467065 SF3B2Q13435 895 aaKnown RBP9.2□□□□□ -0.94
UBXN4-205ENST00000467065 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.2□□□□□ -0.94
UBXN4-205ENST00000467065 TMC1Q8TDI8 760 aa9.2□□□□□ -0.94
UBXN4-205ENST00000467065 A0A1W2PP64 1363 aa9.2□□□□□ -0.94
UBXN4-205ENST00000467065 AATKQ6ZMQ8 1374 aa9.2□□□□□ -0.94
UBXN4-205ENST00000467065 CRB1P82279 1406 aa9.2□□□□□ -0.94
UBXN4-205ENST00000467065 ABCC6O95255 1503 aa9.2□□□□□ -0.94
UBXN4-205ENST00000467065 FAM208AQ9UK61 1670 aaKnown RBP9.2□□□□□ -0.94
UBXN4-205ENST00000467065 NUP188Q5SRE5 1749 aa9.19□□□□□ -0.94
UBXN4-205ENST00000467065 ST20-MTHFSA0A0A6YYL1 179 aa9.19□□□□□ -0.94
UBXN4-205ENST00000467065 DCBLD2Q96PD2 775 aa9.19□□□□□ -0.94
UBXN4-205ENST00000467065 TESK2Q96S53 571 aa9.19□□□□□ -0.94
UBXN4-205ENST00000467065 SLC12A5Q9H2X9 1139 aa9.19□□□□□ -0.94
UBXN4-205ENST00000467065 ZRANB1Q9UGI0 708 aa9.19□□□□□ -0.94
UBXN4-205ENST00000467065 USP47Q96K76 1375 aa9.19□□□□□ -0.94
UBXN4-205ENST00000467065 EDC4Q6P2E9 1401 aaKnown RBP9.19□□□□□ -0.94
UBXN4-205ENST00000467065 KAT6BQ8WYB5 2073 aa9.19□□□□□ -0.94
UBXN4-205ENST00000467065 EIF4G2P78344 907 aaKnown RBP eCLIP9.18□□□□□ -0.94
UBXN4-205ENST00000467065 HDGFL2Q7Z4V5 671 aaPredicted RBP9.18□□□□□ -0.94
UBXN4-205ENST00000467065 NME9Q86XW9 330 aa9.18□□□□□ -0.94
UBXN4-205ENST00000467065 TCP11L2Q8N4U5 519 aa9.18□□□□□ -0.94
UBXN4-205ENST00000467065 OVOS2A0A0J9YW53 1432 aa9.17□□□□□ -0.94
UBXN4-205ENST00000467065 OVOS2Q6IE36 1432 aa9.17□□□□□ -0.94
UBXN4-205ENST00000467065 CDCA8Q53HL2 280 aa9.17□□□□□ -0.94
UBXN4-205ENST00000467065 BARGINQ6ZT62 677 aa9.17□□□□□ -0.94
UBXN4-205ENST00000467065 AXIN2Q9Y2T1 843 aa9.17□□□□□ -0.94
UBXN4-205ENST00000467065 RGPD3A6NKT7 1758 aaPredicted RBP9.17□□□□□ -0.94
UBXN4-205ENST00000467065 RGPD4Q7Z3J3 1758 aa9.17□□□□□ -0.94
UBXN4-205ENST00000467065 USP31Q70CQ4 1352 aa9.16□□□□□ -0.94
UBXN4-205ENST00000467065 WDR17Q8IZU2 1322 aa9.16□□□□□ -0.94
UBXN4-205ENST00000467065 BAG6P46379 1132 aa9.16□□□□□ -0.94
UBXN4-205ENST00000467065 TOM1L2Q6ZVM7 507 aa9.16□□□□□ -0.94
UBXN4-205ENST00000467065 ARHGEF25Q86VW2 580 aa9.16□□□□□ -0.94
UBXN4-205ENST00000467065 KCNH5Q8NCM2 988 aa9.16□□□□□ -0.94
UBXN4-205ENST00000467065 CREBZFQ9NS37 354 aa9.16□□□□□ -0.94
UBXN4-205ENST00000467065 DISP2A7MBM2 1401 aa9.15□□□□□ -0.94
UBXN4-205ENST00000467065 NINLQ9Y2I6 1382 aa9.15□□□□□ -0.94
UBXN4-205ENST00000467065 TRIM37O94972 964 aa9.15□□□□□ -0.94
UBXN4-205ENST00000467065 EN1Q05925 392 aaPredicted RBP9.15□□□□□ -0.94
UBXN4-205ENST00000467065 PDE3BQ13370 1112 aa9.15□□□□□ -0.94
UBXN4-205ENST00000467065 TERF2IPQ9NYB0 399 aa9.15□□□□□ -0.94
UBXN4-205ENST00000467065 THRAP3Q9Y2W1 955 aaKnown RBP9.15□□□□□ -0.94
UBXN4-205ENST00000467065 LRP5O75197 1615 aa9.15□□□□□ -0.94
UBXN4-205ENST00000467065 ANKRD26Q9UPS8 1709 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms