RNA–Protein interactions for RNA: ENST00000466562.5

CRAMP1-204, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 534 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-204ENST00000466562 CRB1P82279 1406 aa22.27■■□□□ 1.16
CRAMP1-204ENST00000466562 NFAT5O94916 1531 aa22.26■■□□□ 1.15
CRAMP1-204ENST00000466562 COL18A1P39060 1754 aa22.26■■□□□ 1.15
CRAMP1-204ENST00000466562 SF3B2Q13435 895 aaKnown RBP22.26■■□□□ 1.15
CRAMP1-204ENST00000466562 DEFB132Q7Z7B7 95 aa22.25■■□□□ 1.15
CRAMP1-204ENST00000466562 TOM1L2Q6ZVM7 507 aa22.24■■□□□ 1.15
CRAMP1-204ENST00000466562 WDR17Q8IZU2 1322 aa22.24■■□□□ 1.15
CRAMP1-204ENST00000466562 CDCA8Q53HL2 280 aa22.23■■□□□ 1.15
CRAMP1-204ENST00000466562 USP54Q70EL1 1684 aa22.23■■□□□ 1.15
CRAMP1-204ENST00000466562 ANKRD36BQ8N2N9 1353 aa22.23■■□□□ 1.15
CRAMP1-204ENST00000466562 PDE3BQ13370 1112 aa22.21■■□□□ 1.15
CRAMP1-204ENST00000466562 OVOS2A0A0J9YW53 1432 aa22.21■■□□□ 1.15
CRAMP1-204ENST00000466562 OVOS2Q6IE36 1432 aa22.21■■□□□ 1.15
CRAMP1-204ENST00000466562 CSB-PGBD3P0DP91 1061 aa22.19■■□□□ 1.14
CRAMP1-204ENST00000466562 FAM196AQ6ZSG2 479 aa22.19■■□□□ 1.14
CRAMP1-204ENST00000466562 ABCC6O95255 1503 aa22.17■■□□□ 1.14
CRAMP1-204ENST00000466562 CARD10Q9BWT7 1032 aa22.17■■□□□ 1.14
CRAMP1-204ENST00000466562 BAG6P46379 1132 aa22.16■■□□□ 1.14
CRAMP1-204ENST00000466562 COG3Q96JB2 828 aa22.16■■□□□ 1.14
CRAMP1-204ENST00000466562 TRIM37O94972 964 aa22.14■■□□□ 1.13
CRAMP1-204ENST00000466562 RGPD5Q99666 1765 aa22.14■■□□□ 1.13
CRAMP1-204ENST00000466562 ERBB3P21860 1342 aa22.13■■□□□ 1.13
CRAMP1-204ENST00000466562 FYB1O15117 783 aa22.13■■□□□ 1.13
CRAMP1-204ENST00000466562 DDB1Q16531 1140 aa22.13■■□□□ 1.13
CRAMP1-204ENST00000466562 CDCA7Q9BWT1 371 aaPredicted RBP22.13■■□□□ 1.13
CRAMP1-204ENST00000466562 PARP4Q9UKK3 1724 aaKnown RBP22.13■■□□□ 1.13
CRAMP1-204ENST00000466562 EIF4G2P78344 907 aaKnown RBP eCLIP22.12■■□□□ 1.13
CRAMP1-204ENST00000466562 EN1Q05925 392 aaPredicted RBP22.12■■□□□ 1.13
CRAMP1-204ENST00000466562 FBLN1P23142 703 aa22.11■■□□□ 1.13
CRAMP1-204ENST00000466562 ANKRD24Q8TF21 1146 aa22.11■■□□□ 1.13
CRAMP1-204ENST00000466562 GGNBP2Q9H3C7 697 aa22.11■■□□□ 1.13
CRAMP1-204ENST00000466562 RGPD1P0DJD0 1748 aa22.11■■□□□ 1.13
CRAMP1-204ENST00000466562 CCDC7Q96M83 1385 aa22.11■■□□□ 1.13
CRAMP1-204ENST00000466562 DISP2A7MBM2 1401 aa22.1■■□□□ 1.13
CRAMP1-204ENST00000466562 HSPA5P11021 654 aaKnown RBP22.1■■□□□ 1.13
CRAMP1-204ENST00000466562 IP6K1Q92551 441 aa22.1■■□□□ 1.13
CRAMP1-204ENST00000466562 CARD14Q9BXL6 1004 aa22.1■■□□□ 1.13
CRAMP1-204ENST00000466562 LTN1O94822 1766 aa22.09■■□□□ 1.13
CRAMP1-204ENST00000466562 MAP3K19Q56UN5 1328 aa22.08■■□□□ 1.13
CRAMP1-204ENST00000466562 C11orf95C9JLR9 678 aaPredicted RBP22.08■■□□□ 1.13
CRAMP1-204ENST00000466562 NLRP2Q9NX02 1062 aa22.08■■□□□ 1.13
CRAMP1-204ENST00000466562 LRRC37A3O60309 1634 aa22.08■■□□□ 1.13
CRAMP1-204ENST00000466562 APBA3O96018 575 aa22.07■■□□□ 1.12
CRAMP1-204ENST00000466562 OVOS2A0A0G2JMS6 1433 aa22.06■■□□□ 1.12
CRAMP1-204ENST00000466562 TNS1Q9HBL0 1735 aaKnown RBP22.06■■□□□ 1.12
CRAMP1-204ENST00000466562 EZH2Q15910 746 aaKnown RBP22.06■■□□□ 1.12
CRAMP1-204ENST00000466562 MARCH10Q8NA82 808 aaPredicted RBP22.06■■□□□ 1.12
CRAMP1-204ENST00000466562 MYOM1P52179 1685 aa22.06■■□□□ 1.12
CRAMP1-204ENST00000466562 EXOC5O00471 708 aa22.05■■□□□ 1.12
CRAMP1-204ENST00000466562 HOXC9P31274 260 aa22.05■■□□□ 1.12
CRAMP1-204ENST00000466562 CAMKK2Q96RR4 588 aa22.05■■□□□ 1.12
CRAMP1-204ENST00000466562 WNK3Q9BYP7 1800 aa22.04■■□□□ 1.12
CRAMP1-204ENST00000466562 AMPHP49418 695 aa22.04■■□□□ 1.12
CRAMP1-204ENST00000466562 POLR3GLQ9BT43 218 aa22.04■■□□□ 1.12
CRAMP1-204ENST00000466562 NSD3Q9BZ95 1437 aa22.04■■□□□ 1.12
CRAMP1-204ENST00000466562 RRS1Q15050 365 aaKnown RBP22.03■■□□□ 1.12
CRAMP1-204ENST00000466562 LTV1Q96GA3 475 aaPredicted RBP22.03■■□□□ 1.12
CRAMP1-204ENST00000466562 PEAK1Q9H792 1746 aa22.03■■□□□ 1.12
CRAMP1-204ENST00000466562 IL2RBP14784 551 aa22.02■■□□□ 1.12
CRAMP1-204ENST00000466562 SRCAPQ6ZRS2 3230 aa22.01■■□□□ 1.11
CRAMP1-204ENST00000466562 BCL9O00512 1426 aa22■■□□□ 1.11
CRAMP1-204ENST00000466562 RTL1A6NKG5 1358 aa21.99■■□□□ 1.11
CRAMP1-204ENST00000466562 TNS2Q63HR2 1409 aa21.99■■□□□ 1.11
CRAMP1-204ENST00000466562 PARD3Q8TEW0 1356 aa21.99■■□□□ 1.11
CRAMP1-204ENST00000466562 PTF1AQ7RTS3 328 aa21.97■■□□□ 1.11
CRAMP1-204ENST00000466562 BCL11BQ9C0K0 894 aaPredicted RBP21.97■■□□□ 1.11
CRAMP1-204ENST00000466562 KIF20BQ96Q89 1820 aa21.96■■□□□ 1.11
CRAMP1-204ENST00000466562 PSDA5PKW4 1024 aaPredicted RBP21.96■■□□□ 1.11
CRAMP1-204ENST00000466562 CGNL1Q0VF96 1302 aa21.96■■□□□ 1.11
CRAMP1-204ENST00000466562 HSP90AB2PQ58FF8 381 aa21.94■■□□□ 1.1
CRAMP1-204ENST00000466562 PLSCR1O15162 318 aa21.93■■□□□ 1.1
CRAMP1-204ENST00000466562 KIF24Q5T7B8 1368 aa21.93■■□□□ 1.1
CRAMP1-204ENST00000466562 NBPF6Q5VWK0 638 aa21.93■■□□□ 1.1
CRAMP1-204ENST00000466562 NBPF4Q96M43 638 aa21.93■■□□□ 1.1
CRAMP1-204ENST00000466562 PANK3Q9H999 370 aa21.93■■□□□ 1.1
CRAMP1-204ENST00000466562 FAM208AQ9UK61 1670 aaKnown RBP21.93■■□□□ 1.1
CRAMP1-204ENST00000466562 INSRP06213 1382 aa21.92■■□□□ 1.1
CRAMP1-204ENST00000466562 FLT4P35916 1363 aa21.92■■□□□ 1.1
CRAMP1-204ENST00000466562 R3HDM1Q15032 1099 aaKnown RBP21.92■■□□□ 1.1
CRAMP1-204ENST00000466562 EMILIN1Q9Y6C2 1016 aa21.92■■□□□ 1.1
CRAMP1-204ENST00000466562 SBF2Q86WG5 1849 aa21.92■■□□□ 1.1
CRAMP1-204ENST00000466562 KCNQ2O43526 872 aa21.9■■□□□ 1.1
CRAMP1-204ENST00000466562 SMG6Q86US8 1419 aaKnown RBP21.89■■□□□ 1.1
CRAMP1-204ENST00000466562 RREB1Q92766 1687 aa21.88■■□□□ 1.09
CRAMP1-204ENST00000466562 USHBP1Q8N6Y0 703 aa21.88■■□□□ 1.09
CRAMP1-204ENST00000466562 DDX54Q8TDD1 881 aaKnown RBP21.88■■□□□ 1.09
CRAMP1-204ENST00000466562 ACSBG1Q96GR2 724 aa21.88■■□□□ 1.09
CRAMP1-204ENST00000466562 PPM1GO15355 546 aaPredicted RBP21.87■■□□□ 1.09
CRAMP1-204ENST00000466562 NBPF14Q5TI25 921 aa21.87■■□□□ 1.09
CRAMP1-204ENST00000466562 PROM2Q8N271 834 aa21.86■■□□□ 1.09
CRAMP1-204ENST00000466562 POLKQ9UBT6 870 aa21.86■■□□□ 1.09
CRAMP1-204ENST00000466562 MEGF6O75095 1541 aa21.85■■□□□ 1.09
CRAMP1-204ENST00000466562 RGPD2P0DJD1 1756 aa21.85■■□□□ 1.09
CRAMP1-204ENST00000466562 ZCRB1Q8TBF4 217 aaKnown RBP21.85■■□□□ 1.09
CRAMP1-204ENST00000466562 NUP188Q5SRE5 1749 aa21.85■■□□□ 1.09
CRAMP1-204ENST00000466562 KIF7Q2M1P5 1343 aa21.84■■□□□ 1.09
CRAMP1-204ENST00000466562 WASHC2AQ641Q2 1341 aa21.84■■□□□ 1.09
CRAMP1-204ENST00000466562 TNNT2P45379 298 aaPredicted RBP21.83■■□□□ 1.09
CRAMP1-204ENST00000466562 RAPGEF4Q8WZA2 1011 aa21.83■■□□□ 1.09
CRAMP1-204ENST00000466562 RGPD3A6NKT7 1758 aaPredicted RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms