RNA–Protein interactions for RNA: ENST00000466223.1

AGRN-204, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 459 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-204ENST00000466223 ATRNO75882 1429 aa21.71■■□□□ 1.07
AGRN-204ENST00000466223 CAMTA1Q9Y6Y1 1673 aa21.7■■□□□ 1.06
AGRN-204ENST00000466223 ZNF316A6NFI3 1004 aaPredicted RBP21.7■■□□□ 1.06
AGRN-204ENST00000466223 TNNT2P45379 298 aaPredicted RBP21.7■■□□□ 1.06
AGRN-204ENST00000466223 GJD4Q96KN9 370 aaPredicted RBP21.7■■□□□ 1.06
AGRN-204ENST00000466223 FBLN1P23142 703 aa21.69■■□□□ 1.06
AGRN-204ENST00000466223 RRS1Q15050 365 aaKnown RBP21.69■■□□□ 1.06
AGRN-204ENST00000466223 MAP3K19Q56UN5 1328 aa21.69■■□□□ 1.06
AGRN-204ENST00000466223 LMO7Q8WWI1 1683 aa21.69■■□□□ 1.06
AGRN-204ENST00000466223 NRAPQ86VF7 1730 aa21.69■■□□□ 1.06
AGRN-204ENST00000466223 CSB-PGBD3P0DP91 1061 aa21.68■■□□□ 1.06
AGRN-204ENST00000466223 DDX10Q13206 875 aaKnown RBP21.68■■□□□ 1.06
AGRN-204ENST00000466223 CC2D1BQ5T0F9 858 aaKnown RBP21.68■■□□□ 1.06
AGRN-204ENST00000466223 IP6K1Q92551 441 aa21.68■■□□□ 1.06
AGRN-204ENST00000466223 AXIN2Q9Y2T1 843 aa21.68■■□□□ 1.06
AGRN-204ENST00000466223 ABCC6O95255 1503 aa21.68■■□□□ 1.06
AGRN-204ENST00000466223 COL18A1P39060 1754 aa21.68■■□□□ 1.06
AGRN-204ENST00000466223 CNGB1Q14028 1251 aaPredicted RBP21.67■■□□□ 1.06
AGRN-204ENST00000466223 PPM1GO15355 546 aaPredicted RBP21.66■■□□□ 1.06
AGRN-204ENST00000466223 RGPD5Q99666 1765 aa21.66■■□□□ 1.06
AGRN-204ENST00000466223 COL5A2P05997 1499 aaPredicted RBP21.65■■□□□ 1.06
AGRN-204ENST00000466223 NPC1L1Q9UHC9 1359 aa21.65■■□□□ 1.06
AGRN-204ENST00000466223 LARP1Q6PKG0 1096 aaKnown RBP21.65■■□□□ 1.06
AGRN-204ENST00000466223 TOM1L2Q6ZVM7 507 aa21.65■■□□□ 1.06
AGRN-204ENST00000466223 BLMP54132 1417 aaPredicted RBP21.64■■□□□ 1.06
AGRN-204ENST00000466223 MAP2P11137 1827 aaKnown RBP21.64■■□□□ 1.06
AGRN-204ENST00000466223 RTL1A6NKG5 1358 aa21.64■■□□□ 1.06
AGRN-204ENST00000466223 KIF24Q5T7B8 1368 aa21.64■■□□□ 1.06
AGRN-204ENST00000466223 SPATA31A5Q5VU36 1347 aa21.64■■□□□ 1.05
AGRN-204ENST00000466223 SPATA31A7Q8IWB4 1347 aa21.64■■□□□ 1.05
AGRN-204ENST00000466223 HOXC9P31274 260 aa21.64■■□□□ 1.05
AGRN-204ENST00000466223 WDR17Q8IZU2 1322 aa21.63■■□□□ 1.05
AGRN-204ENST00000466223 USP35Q9P2H5 1018 aa21.63■■□□□ 1.05
AGRN-204ENST00000466223 FLT4P35916 1363 aa21.62■■□□□ 1.05
AGRN-204ENST00000466223 ANKRD24Q8TF21 1146 aa21.62■■□□□ 1.05
AGRN-204ENST00000466223 EMILIN1Q9Y6C2 1016 aa21.62■■□□□ 1.05
AGRN-204ENST00000466223 CRB1P82279 1406 aa21.62■■□□□ 1.05
AGRN-204ENST00000466223 SPATA31A1Q5TZJ5 1347 aa21.61■■□□□ 1.05
AGRN-204ENST00000466223 LTV1Q96GA3 475 aaPredicted RBP21.61■■□□□ 1.05
AGRN-204ENST00000466223 POLKQ9UBT6 870 aa21.61■■□□□ 1.05
AGRN-204ENST00000466223 A0A0G2JS52 829 aa21.6■■□□□ 1.05
AGRN-204ENST00000466223 MYT1Q01538 1121 aa21.6■■□□□ 1.05
AGRN-204ENST00000466223 ERBB3P21860 1342 aa21.59■■□□□ 1.05
AGRN-204ENST00000466223 CDK12Q9NYV4 1490 aaPredicted RBP21.59■■□□□ 1.05
AGRN-204ENST00000466223 SMG6Q86US8 1419 aaKnown RBP21.59■■□□□ 1.05
AGRN-204ENST00000466223 TCP11L2Q8N4U5 519 aa21.59■■□□□ 1.05
AGRN-204ENST00000466223 NLRP2Q9NX02 1062 aa21.59■■□□□ 1.05
AGRN-204ENST00000466223 THRAP3Q9Y2W1 955 aaKnown RBP21.59■■□□□ 1.05
AGRN-204ENST00000466223 GLI3P10071 1580 aa21.58■■□□□ 1.05
AGRN-204ENST00000466223 FAM98CQ17RN3 349 aaKnown RBP21.58■■□□□ 1.05
AGRN-204ENST00000466223 HSP90AB2PQ58FF8 381 aa21.58■■□□□ 1.05
AGRN-204ENST00000466223 CARD10Q9BWT7 1032 aa21.58■■□□□ 1.05
AGRN-204ENST00000466223 INSRP06213 1382 aa21.58■■□□□ 1.04
AGRN-204ENST00000466223 ONECUT3O60422 494 aaPredicted RBP21.56■■□□□ 1.04
AGRN-204ENST00000466223 BARGINQ6ZT62 677 aa21.55■■□□□ 1.04
AGRN-204ENST00000466223 SEPT12Q8IYM1 358 aa21.55■■□□□ 1.04
AGRN-204ENST00000466223 PEAK1Q9H792 1746 aa21.54■■□□□ 1.04
AGRN-204ENST00000466223 FAM208AQ9UK61 1670 aaKnown RBP21.53■■□□□ 1.04
AGRN-204ENST00000466223 CDCA7Q9BWT1 371 aaPredicted RBP21.53■■□□□ 1.04
AGRN-204ENST00000466223 MTHFSP49914 203 aa21.52■■□□□ 1.04
AGRN-204ENST00000466223 RGS12O14924 1447 aa21.52■■□□□ 1.04
AGRN-204ENST00000466223 RALBP1Q15311 655 aa21.49■■□□□ 1.03
AGRN-204ENST00000466223 PDE3BQ13370 1112 aa21.47■■□□□ 1.03
AGRN-204ENST00000466223 EIF4A2Q14240 407 aaKnown RBP21.47■■□□□ 1.03
AGRN-204ENST00000466223 NBPF6Q5VWK0 638 aa21.47■■□□□ 1.03
AGRN-204ENST00000466223 NBPF4Q96M43 638 aa21.47■■□□□ 1.03
AGRN-204ENST00000466223 CFAP53Q96M91 514 aa21.47■■□□□ 1.03
AGRN-204ENST00000466223 IL2RBP14784 551 aa21.46■■□□□ 1.03
AGRN-204ENST00000466223 PPP2R1AP30153 589 aa21.46■■□□□ 1.03
AGRN-204ENST00000466223 KRT27Q7Z3Y8 459 aa21.46■■□□□ 1.03
AGRN-204ENST00000466223 RGPD2P0DJD1 1756 aa21.46■■□□□ 1.03
AGRN-204ENST00000466223 DDB1Q16531 1140 aa21.45■■□□□ 1.02
AGRN-204ENST00000466223 PARD3Q8TEW0 1356 aa21.45■■□□□ 1.02
AGRN-204ENST00000466223 THSD7AQ9UPZ6 1657 aa21.44■■□□□ 1.02
AGRN-204ENST00000466223 EXOC5O00471 708 aa21.44■■□□□ 1.02
AGRN-204ENST00000466223 RAPGEF4Q8WZA2 1011 aa21.44■■□□□ 1.02
AGRN-204ENST00000466223 BRWD3Q6RI45 1802 aa21.43■■□□□ 1.02
AGRN-204ENST00000466223 DIAPH1O60610 1272 aaKnown RBP21.43■■□□□ 1.02
AGRN-204ENST00000466223 USHBP1Q8N6Y0 703 aa21.43■■□□□ 1.02
AGRN-204ENST00000466223 EYA1Q99502 592 aa21.42■■□□□ 1.02
AGRN-204ENST00000466223 WNK3Q9BYP7 1800 aa21.41■■□□□ 1.02
AGRN-204ENST00000466223 PARP4Q9UKK3 1724 aaKnown RBP21.41■■□□□ 1.02
AGRN-204ENST00000466223 TATP17735 454 aaPredicted RBP21.41■■□□□ 1.02
AGRN-204ENST00000466223 DISP2A7MBM2 1401 aa21.39■■□□□ 1.02
AGRN-204ENST00000466223 IL13P35225 146 aa21.39■■□□□ 1.01
AGRN-204ENST00000466223 NUDCQ9Y266 331 aa21.38■■□□□ 1.01
AGRN-204ENST00000466223 IGSF1Q8N6C5 1336 aa21.37■■□□□ 1.01
AGRN-204ENST00000466223 UPF1Q92900 1129 aaKnown RBP eCLIP21.37■■□□□ 1.01
AGRN-204ENST00000466223 PRKRIP1Q9H875 184 aaPredicted RBP21.37■■□□□ 1.01
AGRN-204ENST00000466223 MYBBP1AQ9BQG0 1328 aaKnown RBP21.36■■□□□ 1.01
AGRN-204ENST00000466223 ZCRB1Q8TBF4 217 aaKnown RBP21.36■■□□□ 1.01
AGRN-204ENST00000466223 U2SURPO15042 1029 aaKnown RBP21.35■■□□□ 1.01
AGRN-204ENST00000466223 ANP32CO43423 234 aa21.35■■□□□ 1.01
AGRN-204ENST00000466223 FAM196AQ6ZSG2 479 aa21.35■■□□□ 1.01
AGRN-204ENST00000466223 LRRC37A3O60309 1634 aa21.35■■□□□ 1.01
AGRN-204ENST00000466223 FAM182BQ5T319 152 aa21.34■■□□□ 1.01
AGRN-204ENST00000466223 SULT6B1Q6IMI4 303 aa21.34■■□□□ 1.01
AGRN-204ENST00000466223 NCAPD2Q15021 1401 aa21.33■■□□□ 1.01
AGRN-204ENST00000466223 TNS2Q63HR2 1409 aa21.33■■□□□ 1.01
AGRN-204ENST00000466223 DDX54Q8TDD1 881 aaKnown RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms