RNA–Protein interactions for RNA: ENST00000466195.1

TSPAN13-202, Transcript of tetraspanin 13, humanhuman

TSL 4

Gene TSPAN13, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN13-202ENST00000466195 BARGINQ6ZT62 677 aa17.75■□□□□ 0.43
TSPAN13-202ENST00000466195 NME9Q86XW9 330 aa17.75■□□□□ 0.43
TSPAN13-202ENST00000466195 EP400Q96L91 3159 aa17.75■□□□□ 0.43
TSPAN13-202ENST00000466195 USP54Q70EL1 1684 aa17.74■□□□□ 0.43
TSPAN13-202ENST00000466195 TOM1L2Q6ZVM7 507 aa17.74■□□□□ 0.43
TSPAN13-202ENST00000466195 ARHGEF25Q86VW2 580 aa17.74■□□□□ 0.43
TSPAN13-202ENST00000466195 CSB-PGBD3P0DP91 1061 aa17.73■□□□□ 0.43
TSPAN13-202ENST00000466195 PDE3BQ13370 1112 aa17.73■□□□□ 0.43
TSPAN13-202ENST00000466195 NFAT5O94916 1531 aa17.72■□□□□ 0.43
TSPAN13-202ENST00000466195 COL18A1P39060 1754 aa17.72■□□□□ 0.43
TSPAN13-202ENST00000466195 ANKRD36BQ8N2N9 1353 aa17.72■□□□□ 0.43
TSPAN13-202ENST00000466195 ZRANB1Q9UGI0 708 aa17.72■□□□□ 0.43
TSPAN13-202ENST00000466195 ABCC6O95255 1503 aa17.72■□□□□ 0.43
TSPAN13-202ENST00000466195 WDR17Q8IZU2 1322 aa17.71■□□□□ 0.42
TSPAN13-202ENST00000466195 COG3Q96JB2 828 aa17.7■□□□□ 0.42
TSPAN13-202ENST00000466195 AXIN2Q9Y2T1 843 aa17.7■□□□□ 0.42
TSPAN13-202ENST00000466195 RGPD5Q99666 1765 aa17.7■□□□□ 0.42
TSPAN13-202ENST00000466195 RGPD1P0DJD0 1748 aa17.69■□□□□ 0.42
TSPAN13-202ENST00000466195 LTN1O94822 1766 aa17.69■□□□□ 0.42
TSPAN13-202ENST00000466195 BAG6P46379 1132 aa17.69■□□□□ 0.42
TSPAN13-202ENST00000466195 FAM182BQ5T319 152 aa17.69■□□□□ 0.42
TSPAN13-202ENST00000466195 FAM196AQ6ZSG2 479 aa17.69■□□□□ 0.42
TSPAN13-202ENST00000466195 PARP4Q9UKK3 1724 aaKnown RBP17.67■□□□□ 0.42
TSPAN13-202ENST00000466195 OVOS2A0A0J9YW53 1432 aa17.67■□□□□ 0.42
TSPAN13-202ENST00000466195 OVOS2Q6IE36 1432 aa17.67■□□□□ 0.42
TSPAN13-202ENST00000466195 EIF4G2P78344 907 aaKnown RBP eCLIP17.67■□□□□ 0.42
TSPAN13-202ENST00000466195 DEFB132Q7Z7B7 95 aa17.66■□□□□ 0.42
TSPAN13-202ENST00000466195 CDCA7Q9BWT1 371 aaPredicted RBP17.66■□□□□ 0.42
TSPAN13-202ENST00000466195 C11orf95C9JLR9 678 aaPredicted RBP17.65■□□□□ 0.42
TSPAN13-202ENST00000466195 WNK3Q9BYP7 1800 aa17.64■□□□□ 0.41
TSPAN13-202ENST00000466195 MAPK8IP2Q13387 824 aaPredicted RBP17.64■□□□□ 0.41
TSPAN13-202ENST00000466195 DDB1Q16531 1140 aa17.64■□□□□ 0.41
TSPAN13-202ENST00000466195 POLR3GLQ9BT43 218 aa17.64■□□□□ 0.41
TSPAN13-202ENST00000466195 CARD10Q9BWT7 1032 aa17.64■□□□□ 0.41
TSPAN13-202ENST00000466195 CCDC7Q96M83 1385 aa17.64■□□□□ 0.41
TSPAN13-202ENST00000466195 MYOM1P52179 1685 aa17.62■□□□□ 0.41
TSPAN13-202ENST00000466195 NLRP2Q9NX02 1062 aa17.62■□□□□ 0.41
TSPAN13-202ENST00000466195 KIF20BQ96Q89 1820 aa17.62■□□□□ 0.41
TSPAN13-202ENST00000466195 ERBB3P21860 1342 aa17.62■□□□□ 0.41
TSPAN13-202ENST00000466195 LRRC37A3O60309 1634 aa17.61■□□□□ 0.41
TSPAN13-202ENST00000466195 TRIM37O94972 964 aa17.61■□□□□ 0.41
TSPAN13-202ENST00000466195 HSPA5P11021 654 aaKnown RBP17.61■□□□□ 0.41
TSPAN13-202ENST00000466195 AMPHP49418 695 aa17.61■□□□□ 0.41
TSPAN13-202ENST00000466195 ANKRD24Q8TF21 1146 aa17.61■□□□□ 0.41
TSPAN13-202ENST00000466195 OVOS2A0A0G2JMS6 1433 aa17.61■□□□□ 0.41
TSPAN13-202ENST00000466195 GGNBP2Q9H3C7 697 aa17.6■□□□□ 0.41
TSPAN13-202ENST00000466195 TNS1Q9HBL0 1735 aaKnown RBP17.6■□□□□ 0.41
TSPAN13-202ENST00000466195 FYB1O15117 783 aa17.59■□□□□ 0.41
TSPAN13-202ENST00000466195 EN1Q05925 392 aaPredicted RBP17.59■□□□□ 0.41
TSPAN13-202ENST00000466195 IP6K1Q92551 441 aa17.59■□□□□ 0.41
TSPAN13-202ENST00000466195 NSD3Q9BZ95 1437 aa17.58■□□□□ 0.41
TSPAN13-202ENST00000466195 EXOC5O00471 708 aa17.58■□□□□ 0.4
TSPAN13-202ENST00000466195 APBA3O96018 575 aa17.58■□□□□ 0.4
TSPAN13-202ENST00000466195 FAM208AQ9UK61 1670 aaKnown RBP17.58■□□□□ 0.4
TSPAN13-202ENST00000466195 DISP2A7MBM2 1401 aa17.57■□□□□ 0.4
TSPAN13-202ENST00000466195 MAP3K19Q56UN5 1328 aa17.57■□□□□ 0.4
TSPAN13-202ENST00000466195 LTV1Q96GA3 475 aaPredicted RBP17.57■□□□□ 0.4
TSPAN13-202ENST00000466195 RTL1A6NKG5 1358 aa17.56■□□□□ 0.4
TSPAN13-202ENST00000466195 PPP4R3CPQ6ZMV5 832 aa17.56■□□□□ 0.4
TSPAN13-202ENST00000466195 IL2RBP14784 551 aa17.55■□□□□ 0.4
TSPAN13-202ENST00000466195 HOXC9P31274 260 aa17.55■□□□□ 0.4
TSPAN13-202ENST00000466195 PARD3Q8TEW0 1356 aa17.54■□□□□ 0.4
TSPAN13-202ENST00000466195 CGNL1Q0VF96 1302 aa17.54■□□□□ 0.4
TSPAN13-202ENST00000466195 TNS2Q63HR2 1409 aa17.54■□□□□ 0.4
TSPAN13-202ENST00000466195 SMG6Q86US8 1419 aaKnown RBP17.54■□□□□ 0.4
TSPAN13-202ENST00000466195 PEAK1Q9H792 1746 aa17.53■□□□□ 0.4
TSPAN13-202ENST00000466195 FBLN1P23142 703 aa17.53■□□□□ 0.4
TSPAN13-202ENST00000466195 RRS1Q15050 365 aaKnown RBP17.53■□□□□ 0.4
TSPAN13-202ENST00000466195 EZH2Q15910 746 aaKnown RBP17.53■□□□□ 0.4
TSPAN13-202ENST00000466195 CARD14Q9BXL6 1004 aa17.53■□□□□ 0.4
TSPAN13-202ENST00000466195 MARCH10Q8NA82 808 aaPredicted RBP17.52■□□□□ 0.4
TSPAN13-202ENST00000466195 SBF2Q86WG5 1849 aa17.51■□□□□ 0.39
TSPAN13-202ENST00000466195 CAMKK2Q96RR4 588 aa17.51■□□□□ 0.39
TSPAN13-202ENST00000466195 FLT4P35916 1363 aa17.5■□□□□ 0.39
TSPAN13-202ENST00000466195 KIF24Q5T7B8 1368 aa17.5■□□□□ 0.39
TSPAN13-202ENST00000466195 BCL9O00512 1426 aa17.49■□□□□ 0.39
TSPAN13-202ENST00000466195 BCL11BQ9C0K0 894 aaPredicted RBP17.49■□□□□ 0.39
TSPAN13-202ENST00000466195 PSDA5PKW4 1024 aaPredicted RBP17.47■□□□□ 0.39
TSPAN13-202ENST00000466195 NBPF14Q5TI25 921 aa17.47■□□□□ 0.39
TSPAN13-202ENST00000466195 RREB1Q92766 1687 aa17.47■□□□□ 0.39
TSPAN13-202ENST00000466195 RGPD2P0DJD1 1756 aa17.46■□□□□ 0.39
TSPAN13-202ENST00000466195 INSRP06213 1382 aa17.46■□□□□ 0.39
TSPAN13-202ENST00000466195 PPM1GO15355 546 aaPredicted RBP17.46■□□□□ 0.39
TSPAN13-202ENST00000466195 PANK3Q9H999 370 aa17.46■□□□□ 0.39
TSPAN13-202ENST00000466195 ANKRD26Q9UPS8 1709 aa17.46■□□□□ 0.39
TSPAN13-202ENST00000466195 RGPD3A6NKT7 1758 aaPredicted RBP17.45■□□□□ 0.38
TSPAN13-202ENST00000466195 RGPD4Q7Z3J3 1758 aa17.45■□□□□ 0.38
TSPAN13-202ENST00000466195 PLSCR1O15162 318 aa17.45■□□□□ 0.38
TSPAN13-202ENST00000466195 HSP90AB2PQ58FF8 381 aa17.45■□□□□ 0.38
TSPAN13-202ENST00000466195 R3HDM1Q15032 1099 aaKnown RBP17.44■□□□□ 0.38
TSPAN13-202ENST00000466195 DDX54Q8TDD1 881 aaKnown RBP17.44■□□□□ 0.38
TSPAN13-202ENST00000466195 RAPGEF4Q8WZA2 1011 aa17.44■□□□□ 0.38
TSPAN13-202ENST00000466195 EMILIN1Q9Y6C2 1016 aa17.44■□□□□ 0.38
TSPAN13-202ENST00000466195 MAP2P11137 1827 aaKnown RBP17.44■□□□□ 0.38
TSPAN13-202ENST00000466195 NUP188Q5SRE5 1749 aa17.44■□□□□ 0.38
TSPAN13-202ENST00000466195 NSD2O96028 1365 aa17.43■□□□□ 0.38
TSPAN13-202ENST00000466195 NBPF6Q5VWK0 638 aa17.43■□□□□ 0.38
TSPAN13-202ENST00000466195 NBPF4Q96M43 638 aa17.43■□□□□ 0.38
TSPAN13-202ENST00000466195 KNSTRNQ9Y448 316 aa17.43■□□□□ 0.38
TSPAN13-202ENST00000466195 KAT6BQ8WYB5 2073 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms