RNA–Protein interactions for RNA: ENST00000466101.1

CCNL1-208, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 911 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-208ENST00000466101 AXIN2Q9Y2T1 843 aa23.33■■□□□ 1.33
CCNL1-208ENST00000466101 SPATA31A5Q5VU36 1347 aa23.33■■□□□ 1.32
CCNL1-208ENST00000466101 SPATA31A7Q8IWB4 1347 aa23.33■■□□□ 1.32
CCNL1-208ENST00000466101 FBLN1P23142 703 aa23.32■■□□□ 1.32
CCNL1-208ENST00000466101 LARP1Q6PKG0 1096 aaKnown RBP23.32■■□□□ 1.32
CCNL1-208ENST00000466101 USP35Q9P2H5 1018 aa23.32■■□□□ 1.32
CCNL1-208ENST00000466101 A0A0G2JS52 829 aa23.31■■□□□ 1.32
CCNL1-208ENST00000466101 MYT1Q01538 1121 aa23.31■■□□□ 1.32
CCNL1-208ENST00000466101 FAM98CQ17RN3 349 aaKnown RBP23.31■■□□□ 1.32
CCNL1-208ENST00000466101 BRWD3Q6RI45 1802 aa23.3■■□□□ 1.32
CCNL1-208ENST00000466101 SPATA31A1Q5TZJ5 1347 aa23.29■■□□□ 1.32
CCNL1-208ENST00000466101 SEPT12Q8IYM1 358 aa23.28■■□□□ 1.32
CCNL1-208ENST00000466101 CGNL1Q0VF96 1302 aa23.28■■□□□ 1.32
CCNL1-208ENST00000466101 CCDC7Q96M83 1385 aa23.27■■□□□ 1.31
CCNL1-208ENST00000466101 WASHC2AQ641Q2 1341 aa23.26■■□□□ 1.31
CCNL1-208ENST00000466101 ABCC6O95255 1503 aa23.25■■□□□ 1.31
CCNL1-208ENST00000466101 CSB-PGBD3P0DP91 1061 aa23.25■■□□□ 1.31
CCNL1-208ENST00000466101 TOM1L2Q6ZVM7 507 aa23.25■■□□□ 1.31
CCNL1-208ENST00000466101 CRB1P82279 1406 aa23.25■■□□□ 1.31
CCNL1-208ENST00000466101 ONECUT3O60422 494 aaPredicted RBP23.24■■□□□ 1.31
CCNL1-208ENST00000466101 RRS1Q15050 365 aaKnown RBP23.24■■□□□ 1.31
CCNL1-208ENST00000466101 MAP3K19Q56UN5 1328 aa23.24■■□□□ 1.31
CCNL1-208ENST00000466101 ANKRD26Q9UPS8 1709 aa23.24■■□□□ 1.31
CCNL1-208ENST00000466101 WDR17Q8IZU2 1322 aa23.23■■□□□ 1.31
CCNL1-208ENST00000466101 THSD7AQ9UPZ6 1657 aa23.22■■□□□ 1.31
CCNL1-208ENST00000466101 AMPHP49418 695 aa23.21■■□□□ 1.31
CCNL1-208ENST00000466101 TCP11L2Q8N4U5 519 aa23.21■■□□□ 1.31
CCNL1-208ENST00000466101 IP6K1Q92551 441 aa23.2■■□□□ 1.3
CCNL1-208ENST00000466101 ANKRD24Q8TF21 1146 aa23.19■■□□□ 1.3
CCNL1-208ENST00000466101 LTV1Q96GA3 475 aaPredicted RBP23.19■■□□□ 1.3
CCNL1-208ENST00000466101 KNSTRNQ9Y448 316 aa23.19■■□□□ 1.3
CCNL1-208ENST00000466101 ERBB3P21860 1342 aa23.18■■□□□ 1.3
CCNL1-208ENST00000466101 HOXC9P31274 260 aa23.18■■□□□ 1.3
CCNL1-208ENST00000466101 TNNT2P45379 298 aaPredicted RBP23.18■■□□□ 1.3
CCNL1-208ENST00000466101 BARGINQ6ZT62 677 aa23.18■■□□□ 1.3
CCNL1-208ENST00000466101 KRT27Q7Z3Y8 459 aa23.18■■□□□ 1.3
CCNL1-208ENST00000466101 BLMP54132 1417 aaPredicted RBP23.17■■□□□ 1.3
CCNL1-208ENST00000466101 WNK3Q9BYP7 1800 aa23.17■■□□□ 1.3
CCNL1-208ENST00000466101 PEAK1Q9H792 1746 aa23.17■■□□□ 1.3
CCNL1-208ENST00000466101 UPF1Q92900 1129 aaKnown RBP eCLIP23.17■■□□□ 1.3
CCNL1-208ENST00000466101 THRAP3Q9Y2W1 955 aaKnown RBP23.17■■□□□ 1.3
CCNL1-208ENST00000466101 NLRP2Q9NX02 1062 aa23.16■■□□□ 1.3
CCNL1-208ENST00000466101 MAP2P11137 1827 aaKnown RBP23.16■■□□□ 1.3
CCNL1-208ENST00000466101 CARD10Q9BWT7 1032 aa23.15■■□□□ 1.3
CCNL1-208ENST00000466101 EMILIN1Q9Y6C2 1016 aa23.15■■□□□ 1.3
CCNL1-208ENST00000466101 FAM182BQ5T319 152 aa23.14■■□□□ 1.29
CCNL1-208ENST00000466101 RGPD2P0DJD1 1756 aa23.14■■□□□ 1.29
CCNL1-208ENST00000466101 RTL1A6NKG5 1358 aa23.14■■□□□ 1.29
CCNL1-208ENST00000466101 PPM1GO15355 546 aaPredicted RBP23.13■■□□□ 1.29
CCNL1-208ENST00000466101 ZEB1P37275 1124 aaPredicted RBP23.13■■□□□ 1.29
CCNL1-208ENST00000466101 PARP4Q9UKK3 1724 aaKnown RBP23.13■■□□□ 1.29
CCNL1-208ENST00000466101 NSD2O96028 1365 aa23.13■■□□□ 1.29
CCNL1-208ENST00000466101 FAM208AQ9UK61 1670 aaKnown RBP23.12■■□□□ 1.29
CCNL1-208ENST00000466101 CNGB1Q14028 1251 aaPredicted RBP23.11■■□□□ 1.29
CCNL1-208ENST00000466101 MORC1Q86VD1 984 aa23.11■■□□□ 1.29
CCNL1-208ENST00000466101 PER1O15534 1290 aaPredicted RBP23.1■■□□□ 1.29
CCNL1-208ENST00000466101 HSP90AB2PQ58FF8 381 aa23.1■■□□□ 1.29
CCNL1-208ENST00000466101 AMER1Q5JTC6 1135 aaPredicted RBP23.1■■□□□ 1.29
CCNL1-208ENST00000466101 LRRC37A3O60309 1634 aa23.1■■□□□ 1.29
CCNL1-208ENST00000466101 FLT4P35916 1363 aa23.1■■□□□ 1.29
CCNL1-208ENST00000466101 PDE3BQ13370 1112 aa23.08■■□□□ 1.29
CCNL1-208ENST00000466101 CC2D1BQ5T0F9 858 aaKnown RBP23.08■■□□□ 1.29
CCNL1-208ENST00000466101 POLKQ9UBT6 870 aa23.08■■□□□ 1.29
CCNL1-208ENST00000466101 INSRP06213 1382 aa23.07■■□□□ 1.28
CCNL1-208ENST00000466101 SMG6Q86US8 1419 aaKnown RBP23.07■■□□□ 1.28
CCNL1-208ENST00000466101 KIF24Q5T7B8 1368 aa23.06■■□□□ 1.28
CCNL1-208ENST00000466101 DDB1Q16531 1140 aa23.06■■□□□ 1.28
CCNL1-208ENST00000466101 DISP2A7MBM2 1401 aa23.06■■□□□ 1.28
CCNL1-208ENST00000466101 USHBP1Q8N6Y0 703 aa23.04■■□□□ 1.28
CCNL1-208ENST00000466101 CDCA7Q9BWT1 371 aaPredicted RBP23.04■■□□□ 1.28
CCNL1-208ENST00000466101 IL2RBP14784 551 aa23.02■■□□□ 1.28
CCNL1-208ENST00000466101 NBPF6Q5VWK0 638 aa23.02■■□□□ 1.28
CCNL1-208ENST00000466101 NBPF4Q96M43 638 aa23.02■■□□□ 1.28
CCNL1-208ENST00000466101 EP400Q96L91 3159 aa23.01■■□□□ 1.27
CCNL1-208ENST00000466101 EXOC5O00471 708 aa23■■□□□ 1.27
CCNL1-208ENST00000466101 FAM196AQ6ZSG2 479 aa22.99■■□□□ 1.27
CCNL1-208ENST00000466101 TNS2Q63HR2 1409 aa22.98■■□□□ 1.27
CCNL1-208ENST00000466101 RGPD1P0DJD0 1748 aa22.97■■□□□ 1.27
CCNL1-208ENST00000466101 SF3B2Q13435 895 aaKnown RBP22.97■■□□□ 1.27
CCNL1-208ENST00000466101 CCDC125Q86Z20 511 aa22.97■■□□□ 1.27
CCNL1-208ENST00000466101 MARCH10Q8NA82 808 aaPredicted RBP22.97■■□□□ 1.27
CCNL1-208ENST00000466101 NPC1L1Q9UHC9 1359 aa22.96■■□□□ 1.27
CCNL1-208ENST00000466101 OVOS2A0A0G2JMS6 1433 aa22.95■■□□□ 1.26
CCNL1-208ENST00000466101 MEGF6O75095 1541 aa22.95■■□□□ 1.26
CCNL1-208ENST00000466101 TRIM37O94972 964 aa22.95■■□□□ 1.26
CCNL1-208ENST00000466101 EIF4A2Q14240 407 aaKnown RBP22.95■■□□□ 1.26
CCNL1-208ENST00000466101 TNS1Q9HBL0 1735 aaKnown RBP22.94■■□□□ 1.26
CCNL1-208ENST00000466101 DEFB132Q7Z7B7 95 aa22.93■■□□□ 1.26
CCNL1-208ENST00000466101 EYA1Q99502 592 aa22.93■■□□□ 1.26
CCNL1-208ENST00000466101 SBF2Q86WG5 1849 aa22.93■■□□□ 1.26
CCNL1-208ENST00000466101 MTHFSP49914 203 aa22.92■■□□□ 1.26
CCNL1-208ENST00000466101 DDX10Q13206 875 aaKnown RBP22.92■■□□□ 1.26
CCNL1-208ENST00000466101 RAPGEF4Q8WZA2 1011 aa22.92■■□□□ 1.26
CCNL1-208ENST00000466101 SHANK3Q9BYB0 1731 aa22.91■■□□□ 1.26
CCNL1-208ENST00000466101 TATP17735 454 aaPredicted RBP22.9■■□□□ 1.26
CCNL1-208ENST00000466101 DDX54Q8TDD1 881 aaKnown RBP22.9■■□□□ 1.26
CCNL1-208ENST00000466101 ZCRB1Q8TBF4 217 aaKnown RBP22.88■■□□□ 1.25
CCNL1-208ENST00000466101 NCAPD2Q15021 1401 aa22.88■■□□□ 1.25
CCNL1-208ENST00000466101 BAG6P46379 1132 aa22.87■■□□□ 1.25
CCNL1-208ENST00000466101 APBA3O96018 575 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms