RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 ABCC6O95255 1503 aa25.15■■□□□ 1.62
HOXA9-203ENST00000465941 MAP3K19Q56UN5 1328 aa25.14■■□□□ 1.62
HOXA9-203ENST00000465941 COL18A1P39060 1754 aa25.14■■□□□ 1.62
HOXA9-203ENST00000465941 NPC1L1Q9UHC9 1359 aa25.14■■□□□ 1.61
HOXA9-203ENST00000465941 NRAPQ86VF7 1730 aa25.13■■□□□ 1.61
HOXA9-203ENST00000465941 IP6K1Q92551 441 aa25.13■■□□□ 1.61
HOXA9-203ENST00000465941 STRN4Q9NRL3 753 aa25.13■■□□□ 1.61
HOXA9-203ENST00000465941 RRS1Q15050 365 aaKnown RBP25.12■■□□□ 1.61
HOXA9-203ENST00000465941 MORC1Q86VD1 984 aa25.12■■□□□ 1.61
HOXA9-203ENST00000465941 COL5A2P05997 1499 aaPredicted RBP25.12■■□□□ 1.61
HOXA9-203ENST00000465941 ZNF316A6NFI3 1004 aaPredicted RBP25.1■■□□□ 1.61
HOXA9-203ENST00000465941 AMPHP49418 695 aa25.1■■□□□ 1.61
HOXA9-203ENST00000465941 CCDC9Q9Y3X0 531 aaKnown RBP25.1■■□□□ 1.61
HOXA9-203ENST00000465941 SPATA31A5Q5VU36 1347 aa25.1■■□□□ 1.61
HOXA9-203ENST00000465941 SPATA31A7Q8IWB4 1347 aa25.1■■□□□ 1.61
HOXA9-203ENST00000465941 ANKRD26Q9UPS8 1709 aa25.09■■□□□ 1.61
HOXA9-203ENST00000465941 KIF24Q5T7B8 1368 aa25.09■■□□□ 1.61
HOXA9-203ENST00000465941 HOXC9P31274 260 aa25.09■■□□□ 1.61
HOXA9-203ENST00000465941 LARP1Q6PKG0 1096 aaKnown RBP25.09■■□□□ 1.61
HOXA9-203ENST00000465941 TNNT2P45379 298 aaPredicted RBP25.08■■□□□ 1.61
HOXA9-203ENST00000465941 DDX10Q13206 875 aaKnown RBP25.08■■□□□ 1.61
HOXA9-203ENST00000465941 CC2D1BQ5T0F9 858 aaKnown RBP25.08■■□□□ 1.61
HOXA9-203ENST00000465941 BLMP54132 1417 aaPredicted RBP25.08■■□□□ 1.61
HOXA9-203ENST00000465941 LTN1O94822 1766 aa25.08■■□□□ 1.6
HOXA9-203ENST00000465941 RTL1A6NKG5 1358 aa25.07■■□□□ 1.6
HOXA9-203ENST00000465941 POLKQ9UBT6 870 aa25.07■■□□□ 1.6
HOXA9-203ENST00000465941 WDR17Q8IZU2 1322 aa25.07■■□□□ 1.6
HOXA9-203ENST00000465941 SPATA31A1Q5TZJ5 1347 aa25.06■■□□□ 1.6
HOXA9-203ENST00000465941 CDK12Q9NYV4 1490 aaPredicted RBP25.05■■□□□ 1.6
HOXA9-203ENST00000465941 ONECUT3O60422 494 aaPredicted RBP25.05■■□□□ 1.6
HOXA9-203ENST00000465941 EMILIN1Q9Y6C2 1016 aa25.05■■□□□ 1.6
HOXA9-203ENST00000465941 GLI3P10071 1580 aa25.04■■□□□ 1.6
HOXA9-203ENST00000465941 ERBB3P21860 1342 aa25.04■■□□□ 1.6
HOXA9-203ENST00000465941 FLT4P35916 1363 aa25.04■■□□□ 1.6
HOXA9-203ENST00000465941 CRB1P82279 1406 aa25.03■■□□□ 1.6
HOXA9-203ENST00000465941 ANKRD24Q8TF21 1146 aa25.03■■□□□ 1.6
HOXA9-203ENST00000465941 CSB-PGBD3P0DP91 1061 aa25.02■■□□□ 1.6
HOXA9-203ENST00000465941 TOM1L2Q6ZVM7 507 aa25.02■■□□□ 1.6
HOXA9-203ENST00000465941 HSP90AB2PQ58FF8 381 aa25.01■■□□□ 1.59
HOXA9-203ENST00000465941 CARD10Q9BWT7 1032 aa25.01■■□□□ 1.59
HOXA9-203ENST00000465941 THRAP3Q9Y2W1 955 aaKnown RBP25.01■■□□□ 1.59
HOXA9-203ENST00000465941 INSRP06213 1382 aa25.01■■□□□ 1.59
HOXA9-203ENST00000465941 RGPD5Q99666 1765 aa25■■□□□ 1.59
HOXA9-203ENST00000465941 PPM1GO15355 546 aaPredicted RBP25■■□□□ 1.59
HOXA9-203ENST00000465941 BARGINQ6ZT62 677 aa25■■□□□ 1.59
HOXA9-203ENST00000465941 TCP11L2Q8N4U5 519 aa25■■□□□ 1.59
HOXA9-203ENST00000465941 USP35Q9P2H5 1018 aa25■■□□□ 1.59
HOXA9-203ENST00000465941 PEAK1Q9H792 1746 aa24.98■■□□□ 1.59
HOXA9-203ENST00000465941 CNGB1Q14028 1251 aaPredicted RBP24.98■■□□□ 1.59
HOXA9-203ENST00000465941 FAM98CQ17RN3 349 aaKnown RBP24.98■■□□□ 1.59
HOXA9-203ENST00000465941 RGS12O14924 1447 aa24.97■■□□□ 1.59
HOXA9-203ENST00000465941 SMG6Q86US8 1419 aaKnown RBP24.97■■□□□ 1.59
HOXA9-203ENST00000465941 LTV1Q96GA3 475 aaPredicted RBP24.97■■□□□ 1.59
HOXA9-203ENST00000465941 MAP2P11137 1827 aaKnown RBP24.96■■□□□ 1.59
HOXA9-203ENST00000465941 NLRP2Q9NX02 1062 aa24.96■■□□□ 1.59
HOXA9-203ENST00000465941 SEPT12Q8IYM1 358 aa24.95■■□□□ 1.58
HOXA9-203ENST00000465941 MTHFSP49914 203 aa24.93■■□□□ 1.58
HOXA9-203ENST00000465941 NBPF6Q5VWK0 638 aa24.9■■□□□ 1.58
HOXA9-203ENST00000465941 NBPF4Q96M43 638 aa24.9■■□□□ 1.58
HOXA9-203ENST00000465941 CDCA7Q9BWT1 371 aaPredicted RBP24.9■■□□□ 1.58
HOXA9-203ENST00000465941 A0A0G2JS52 829 aa24.89■■□□□ 1.58
HOXA9-203ENST00000465941 MYT1Q01538 1121 aa24.89■■□□□ 1.58
HOXA9-203ENST00000465941 PARD3Q8TEW0 1356 aa24.89■■□□□ 1.57
HOXA9-203ENST00000465941 FAM208AQ9UK61 1670 aaKnown RBP24.88■■□□□ 1.57
HOXA9-203ENST00000465941 EIF4A2Q14240 407 aaKnown RBP24.88■■□□□ 1.57
HOXA9-203ENST00000465941 THSD7AQ9UPZ6 1657 aa24.88■■□□□ 1.57
HOXA9-203ENST00000465941 PPP2R1AP30153 589 aa24.87■■□□□ 1.57
HOXA9-203ENST00000465941 RALBP1Q15311 655 aa24.86■■□□□ 1.57
HOXA9-203ENST00000465941 DISP2A7MBM2 1401 aa24.86■■□□□ 1.57
HOXA9-203ENST00000465941 IL2RBP14784 551 aa24.84■■□□□ 1.57
HOXA9-203ENST00000465941 KRT27Q7Z3Y8 459 aa24.84■■□□□ 1.57
HOXA9-203ENST00000465941 EYA1Q99502 592 aa24.84■■□□□ 1.57
HOXA9-203ENST00000465941 IL13P35225 146 aa24.82■■□□□ 1.56
HOXA9-203ENST00000465941 NCAPD2Q15021 1401 aa24.81■■□□□ 1.56
HOXA9-203ENST00000465941 DDB1Q16531 1140 aa24.81■■□□□ 1.56
HOXA9-203ENST00000465941 USHBP1Q8N6Y0 703 aa24.81■■□□□ 1.56
HOXA9-203ENST00000465941 PARP4Q9UKK3 1724 aaKnown RBP24.79■■□□□ 1.56
HOXA9-203ENST00000465941 EXOC5O00471 708 aa24.79■■□□□ 1.56
HOXA9-203ENST00000465941 DIAPH1O60610 1272 aaKnown RBP24.79■■□□□ 1.56
HOXA9-203ENST00000465941 PDE3BQ13370 1112 aa24.79■■□□□ 1.56
HOXA9-203ENST00000465941 IGSF1Q8N6C5 1336 aa24.79■■□□□ 1.56
HOXA9-203ENST00000465941 RGPD2P0DJD1 1756 aa24.78■■□□□ 1.56
HOXA9-203ENST00000465941 CFAP53Q96M91 514 aa24.78■■□□□ 1.56
HOXA9-203ENST00000465941 BRWD3Q6RI45 1802 aa24.77■■□□□ 1.56
HOXA9-203ENST00000465941 RAPGEF4Q8WZA2 1011 aa24.77■■□□□ 1.56
HOXA9-203ENST00000465941 PRKRIP1Q9H875 184 aaPredicted RBP24.77■■□□□ 1.56
HOXA9-203ENST00000465941 WNK3Q9BYP7 1800 aa24.76■■□□□ 1.55
HOXA9-203ENST00000465941 COL3A1P02461 1466 aaPredicted RBP24.75■■□□□ 1.55
HOXA9-203ENST00000465941 TATP17735 454 aaPredicted RBP24.74■■□□□ 1.55
HOXA9-203ENST00000465941 LRRC37A3O60309 1634 aa24.74■■□□□ 1.55
HOXA9-203ENST00000465941 MEGF6O75095 1541 aa24.73■■□□□ 1.55
HOXA9-203ENST00000465941 TNS2Q63HR2 1409 aa24.73■■□□□ 1.55
HOXA9-203ENST00000465941 MYBBP1AQ9BQG0 1328 aaKnown RBP24.73■■□□□ 1.55
HOXA9-203ENST00000465941 OVOS2A0A0G2JMS6 1433 aa24.72■■□□□ 1.55
HOXA9-203ENST00000465941 FAM182BQ5T319 152 aa24.71■■□□□ 1.55
HOXA9-203ENST00000465941 FAM196AQ6ZSG2 479 aa24.71■■□□□ 1.55
HOXA9-203ENST00000465941 MARCH10Q8NA82 808 aaPredicted RBP24.71■■□□□ 1.55
HOXA9-203ENST00000465941 ZCRB1Q8TBF4 217 aaKnown RBP24.71■■□□□ 1.55
HOXA9-203ENST00000465941 SULT6B1Q6IMI4 303 aa24.7■■□□□ 1.54
HOXA9-203ENST00000465941 RGPD1P0DJD0 1748 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms