RNA–Protein interactions for RNA: ENST00000465672.1

RETREG2-209, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 4

Gene RETREG2, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-209ENST00000465672 CHD4Q14839 1912 aa22.46■■□□□ 1.19
RETREG2-209ENST00000465672 PTGER2P43116 358 aa22.45■■□□□ 1.18
RETREG2-209ENST00000465672 MARCH10Q8NA82 808 aaPredicted RBP22.45■■□□□ 1.18
RETREG2-209ENST00000465672 CABP2Q9NPB3 220 aa22.45■■□□□ 1.18
RETREG2-209ENST00000465672 AATKQ6ZMQ8 1374 aa22.45■■□□□ 1.18
RETREG2-209ENST00000465672 RGPD5Q99666 1765 aa22.43■■□□□ 1.18
RETREG2-209ENST00000465672 STK32BQ9NY57 414 aa22.43■■□□□ 1.18
RETREG2-209ENST00000465672 COL18A1P39060 1754 aa22.43■■□□□ 1.18
RETREG2-209ENST00000465672 FHDC1Q9C0D6 1143 aaPredicted RBP22.42■■□□□ 1.18
RETREG2-209ENST00000465672 KIAA1210Q9ULL0 1709 aa22.41■■□□□ 1.18
RETREG2-209ENST00000465672 TXNRD1Q16881 649 aa22.41■■□□□ 1.18
RETREG2-209ENST00000465672 NBPF1Q3BBV0 1214 aa22.41■■□□□ 1.18
RETREG2-209ENST00000465672 SYT17Q9BSW7 474 aa22.41■■□□□ 1.18
RETREG2-209ENST00000465672 AXIN2Q9Y2T1 843 aa22.41■■□□□ 1.18
RETREG2-209ENST00000465672 CABP1Q9NZU7 370 aa22.4■■□□□ 1.18
RETREG2-209ENST00000465672 WDR17Q8IZU2 1322 aa22.39■■□□□ 1.18
RETREG2-209ENST00000465672 SENP3-EIF4A1A0A087X0R7 540 aa22.39■■□□□ 1.17
RETREG2-209ENST00000465672 SLC15A2Q16348 729 aa22.39■■□□□ 1.17
RETREG2-209ENST00000465672 SLIT3O75094 1523 aa22.39■■□□□ 1.17
RETREG2-209ENST00000465672 USP6P35125 1406 aa22.39■■□□□ 1.17
RETREG2-209ENST00000465672 BRD4O60885 1362 aaPredicted RBP22.38■■□□□ 1.17
RETREG2-209ENST00000465672 CDCA7Q9BWT1 371 aaPredicted RBP22.38■■□□□ 1.17
RETREG2-209ENST00000465672 KAT6BQ8WYB5 2073 aa22.38■■□□□ 1.17
RETREG2-209ENST00000465672 CENPJQ9HC77 1338 aaPredicted RBP22.37■■□□□ 1.17
RETREG2-209ENST00000465672 CSB-PGBD3P0DP91 1061 aa22.37■■□□□ 1.17
RETREG2-209ENST00000465672 PIK3C2AO00443 1686 aa22.36■■□□□ 1.17
RETREG2-209ENST00000465672 SOX12O15370 315 aa22.36■■□□□ 1.17
RETREG2-209ENST00000465672 MTFR1LQ9H019 292 aa22.36■■□□□ 1.17
RETREG2-209ENST00000465672 QRICH2Q9H0J4 1663 aa22.36■■□□□ 1.17
RETREG2-209ENST00000465672 BCL9O00512 1426 aa22.35■■□□□ 1.17
RETREG2-209ENST00000465672 EXOC5O00471 708 aa22.34■■□□□ 1.17
RETREG2-209ENST00000465672 CPSF1Q10570 1443 aaKnown RBP22.33■■□□□ 1.17
RETREG2-209ENST00000465672 UTRNP46939 3433 aa22.33■■□□□ 1.17
RETREG2-209ENST00000465672 CARD10Q9BWT7 1032 aa22.33■■□□□ 1.17
RETREG2-209ENST00000465672 C1QTNF8P60827 252 aa22.32■■□□□ 1.16
RETREG2-209ENST00000465672 ARHGEF25Q86VW2 580 aa22.31■■□□□ 1.16
RETREG2-209ENST00000465672 SGIP1Q9BQI5 828 aa22.31■■□□□ 1.16
RETREG2-209ENST00000465672 ACSBG1Q96GR2 724 aa22.3■■□□□ 1.16
RETREG2-209ENST00000465672 ARXQ96QS3 562 aa22.3■■□□□ 1.16
RETREG2-209ENST00000465672 KCNH5Q8NCM2 988 aa22.28■■□□□ 1.16
RETREG2-209ENST00000465672 NHSQ6T4R5 1651 aa22.27■■□□□ 1.16
RETREG2-209ENST00000465672 TTC21BQ7Z4L5 1316 aa22.26■■□□□ 1.15
RETREG2-209ENST00000465672 GPR162Q16538 588 aa22.25■■□□□ 1.15
RETREG2-209ENST00000465672 CCDC7Q96M83 1385 aa22.25■■□□□ 1.15
RETREG2-209ENST00000465672 TNS2Q63HR2 1409 aa22.24■■□□□ 1.15
RETREG2-209ENST00000465672 KLHL34Q8N239 644 aa22.24■■□□□ 1.15
RETREG2-209ENST00000465672 BTAF1O14981 1849 aa22.24■■□□□ 1.15
RETREG2-209ENST00000465672 TRPM1Q7Z4N2 1603 aa22.24■■□□□ 1.15
RETREG2-209ENST00000465672 EVC2Q86UK5 1308 aa22.23■■□□□ 1.15
RETREG2-209ENST00000465672 PAPPAQ13219 1627 aa22.22■■□□□ 1.15
RETREG2-209ENST00000465672 ZNF692Q9BU19 519 aaPredicted RBP22.22■■□□□ 1.15
RETREG2-209ENST00000465672 ZNF827Q17R98 1081 aa22.21■■□□□ 1.15
RETREG2-209ENST00000465672 PELP1Q8IZL8 1130 aaKnown RBP22.21■■□□□ 1.15
RETREG2-209ENST00000465672 NFAT5O94916 1531 aa22.21■■□□□ 1.15
RETREG2-209ENST00000465672 NLRP2Q9NX02 1062 aa22.2■■□□□ 1.14
RETREG2-209ENST00000465672 MAP3K5Q99683 1374 aa22.2■■□□□ 1.14
RETREG2-209ENST00000465672 TTC21AQ8NDW8 1320 aa22.19■■□□□ 1.14
RETREG2-209ENST00000465672 ABCC6O95255 1503 aa22.18■■□□□ 1.14
RETREG2-209ENST00000465672 GIGYF1O75420 1035 aaPredicted RBP22.18■■□□□ 1.14
RETREG2-209ENST00000465672 LRRC4BQ9NT99 713 aa22.17■■□□□ 1.14
RETREG2-209ENST00000465672 IL2RBP14784 551 aa22.16■■□□□ 1.14
RETREG2-209ENST00000465672 LTN1O94822 1766 aa22.15■■□□□ 1.14
RETREG2-209ENST00000465672 KTN1Q86UP2 1357 aaKnown RBP22.15■■□□□ 1.14
RETREG2-209ENST00000465672 POLD1P28340 1107 aa22.14■■□□□ 1.13
RETREG2-209ENST00000465672 IFFO2Q5TF58 517 aa22.14■■□□□ 1.13
RETREG2-209ENST00000465672 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.14■■□□□ 1.13
RETREG2-209ENST00000465672 ERBB3P21860 1342 aa22.13■■□□□ 1.13
RETREG2-209ENST00000465672 QSER1Q2KHR3 1735 aa22.12■■□□□ 1.13
RETREG2-209ENST00000465672 TUBGCP6Q96RT7 1819 aa22.11■■□□□ 1.13
RETREG2-209ENST00000465672 SLC16A10Q8TF71 515 aa22.11■■□□□ 1.13
RETREG2-209ENST00000465672 AKT1S1Q96B36 256 aa22.11■■□□□ 1.13
RETREG2-209ENST00000465672 MON2Q7Z3U7 1717 aa22.11■■□□□ 1.13
RETREG2-209ENST00000465672 KCNQ4P56696 695 aa22.09■■□□□ 1.13
RETREG2-209ENST00000465672 NLGN2Q8NFZ4 835 aa22.09■■□□□ 1.13
RETREG2-209ENST00000465672 ANKRD24Q8TF21 1146 aa22.09■■□□□ 1.13
RETREG2-209ENST00000465672 TFCP2L1Q9NZI6 479 aa22.09■■□□□ 1.13
RETREG2-209ENST00000465672 COL24A1Q17RW2 1714 aa22.09■■□□□ 1.13
RETREG2-209ENST00000465672 PNPLA7Q6ZV29 1317 aa22.08■■□□□ 1.13
RETREG2-209ENST00000465672 NME9Q86XW9 330 aa22.08■■□□□ 1.13
RETREG2-209ENST00000465672 DDX54Q8TDD1 881 aaKnown RBP22.08■■□□□ 1.13
RETREG2-209ENST00000465672 SHANK3Q9BYB0 1731 aa22.08■■□□□ 1.12
RETREG2-209ENST00000465672 SLC27A3Q5K4L6 730 aa22.07■■□□□ 1.12
RETREG2-209ENST00000465672 L3MBTL2Q969R5 705 aa22.07■■□□□ 1.12
RETREG2-209ENST00000465672 SYTL4Q96C24 671 aaPredicted RBP22.06■■□□□ 1.12
RETREG2-209ENST00000465672 USP31Q70CQ4 1352 aa22.05■■□□□ 1.12
RETREG2-209ENST00000465672 ROCK2O75116 1388 aaKnown RBP22.04■■□□□ 1.12
RETREG2-209ENST00000465672 USP54Q70EL1 1684 aa22.04■■□□□ 1.12
RETREG2-209ENST00000465672 GOLGB1Q14789 3259 aaKnown RBP22.04■■□□□ 1.12
RETREG2-209ENST00000465672 YBX3P16989 372 aaKnown RBP eCLIP22.03■■□□□ 1.12
RETREG2-209ENST00000465672 MSH5O43196 834 aa22.02■■□□□ 1.12
RETREG2-209ENST00000465672 LTV1Q96GA3 475 aaPredicted RBP22.02■■□□□ 1.12
RETREG2-209ENST00000465672 PRIM1P49642 420 aaKnown RBP22.01■■□□□ 1.11
RETREG2-209ENST00000465672 LY75O60449 1722 aa22■■□□□ 1.11
RETREG2-209ENST00000465672 DOT1LQ8TEK3 1739 aa22■■□□□ 1.11
RETREG2-209ENST00000465672 GRIN3BO60391 1043 aa22■■□□□ 1.11
RETREG2-209ENST00000465672 TMC1Q8TDI8 760 aa22■■□□□ 1.11
RETREG2-209ENST00000465672 SBNO2Q9Y2G9 1366 aa21.99■■□□□ 1.11
RETREG2-209ENST00000465672 CEP350Q5VT06 3117 aa21.97■■□□□ 1.11
RETREG2-209ENST00000465672 CD163L1Q9NR16 1453 aa21.97■■□□□ 1.11
RETREG2-209ENST00000465672 FAM208AQ9UK61 1670 aaKnown RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms