RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 RASSF4Q9H2L5 321 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 RANBP17Q9H2T7 1088 aaKnown RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 CHCHD3Q9NX63 227 aaKnown RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 ETAA1Q9NY74 926 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 DONSONQ9NYP3 566 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 UBAP1Q9NZ09 502 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 POGKQ9P215 609 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 RABL2AQ9UBK7 228 aaPredicted RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 FBXO9Q9UK97 447 aaPredicted RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 TPX2Q9ULW0 747 aaKnown RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 G3BP2Q9UN86 482 aaKnown RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 WDR3Q9UNX4 943 aaKnown RBP eCLIP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 ZNF232Q9UNY5 417 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 ITM2BQ9Y287 266 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 CHMP3Q9Y3E7 222 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 NUB1Q9Y5A7 615 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 RAD54L2Q9Y4B4 1467 aa1.09□□□□□ -2.24
RPL39P28-201ENST00000465655 ERBB4Q15303 1308 aa1.09□□□□□ -2.24
RPL39P28-201ENST00000465655 SMARCA2P51531 1590 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 A0A1B0GUL7 405 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 SHTN1A0MZ66 631 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 ANKRD18BA2A2Z9 1011 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 KLHL33A6NCF5 533 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 U2SURPO15042 1029 aaKnown RBP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 KINO60870 393 aaKnown RBP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 PPFIA3O75145 1194 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 COQ9O75208 318 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 HMMRO75330 724 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 PPFIA2O75334 1257 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 AP1G2O75843 785 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 FCHSD2O94868 740 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 PARNO95453 639 aaKnown RBP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 IGHDP01880 384 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 HSP90AB1P08238 724 aaKnown RBP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 FAM200BP0CF97 657 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 CHGAP10645 457 aaKnown RBP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 XRCC6P12956 609 aaKnown RBP eCLIP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 BDNFP23560 247 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 RRM1P23921 792 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 GUCY2CP25092 1073 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 U2AF2P26368 475 aaKnown RBP eCLIP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 ATICP31939 592 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 RDXP35241 583 aaKnown RBP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 COPB2P35606 906 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 MAP2K2P36507 400 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 FLT3P36888 993 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 NOP2P46087 812 aaKnown RBP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 MRE11P49959 708 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 GYS2P54840 703 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 IRX1P78414 480 aaPredicted RBP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 HNRNPUQ00839 825 aaKnown RBP eCLIP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 XPCQ01831 940 aaPredicted RBP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 GABPB1Q06547 395 aaPredicted RBP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 RAD51AP2Q09MP3 1159 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 CCDC173Q0VFZ6 552 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 TRDNQ13061 729 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 PRPF4BQ13523 1007 aaKnown RBP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 BMS1Q14692 1282 aaKnown RBP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 SLMAPQ14BN4 828 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 DBN1Q16643 649 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 ATP2B3Q16720 1220 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 UVSSAQ2YD98 709 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 ZNF394Q53GI3 561 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 NOM1Q5C9Z4 860 aaKnown RBP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 ZC3H12AQ5D1E8 599 aaKnown RBP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 JAKMIP3Q5VZ66 844 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 LARP1BQ659C4 914 aaKnown RBP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 LMBRD2Q68DH5 695 aaPredicted RBP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 NAIF1Q69YI7 327 aaPredicted RBP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 CC2D1AQ6P1N0 951 aaPredicted RBP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 GIMAP6Q6P9H5 292 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 OLFML1Q6UWY5 402 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 CLEC4GQ6UXB4 293 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 CDC37L1Q7L3B6 337 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 ARMC9Q7Z3E5 817 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 WAPLQ7Z5K2 1190 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 UBE2Q1Q7Z7E8 422 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 C11orf96Q7Z7L8 435 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 TMEM110Q86TL2 294 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 PABPN1Q86U42 306 aaKnown RBP eCLIP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 CADPS2Q86UW7 1296 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 ZSCAN30Q86W11 494 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 FMNL3Q8IVF7 1028 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 IQCF2Q8IXL9 164 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 CCDC65Q8IXS2 484 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 C10orf67Q8IYJ2 551 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 MYO1HQ8N1T3 1032 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 CLASRPQ8N2M8 674 aaKnown RBP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 PDCL2Q8N4E4 241 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 PAF1Q8N7H5 531 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 SPC24Q8NBT2 197 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 TAF4BQ92750 862 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 THOC1Q96FV9 657 aaKnown RBP1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 MPP4Q96JB8 637 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 KCNH8Q96L42 1107 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 PAGR1Q9BTK6 254 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 PANK2Q9BZ23 570 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 UBA5Q9GZZ9 404 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 NACA2Q9H009 215 aa1.08□□□□□ -2.24
RPL39P28-201ENST00000465655 MAF1Q9H063 256 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms