RNA–Protein interactions for RNA: ENST00000465630.1

UBR3-207, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-207ENST00000465630 PPP2R2DQ66LE6 453 aa8.23□□□□□ -1.09
UBR3-207ENST00000465630 PDXDC2PQ6P474 469 aa8.23□□□□□ -1.09
UBR3-207ENST00000465630 ZSCAN1Q8NBB4 408 aa8.23□□□□□ -1.09
UBR3-207ENST00000465630 ARHGAP9Q9BRR9 750 aa8.23□□□□□ -1.09
UBR3-207ENST00000465630 EMILIN1Q9Y6C2 1016 aa8.23□□□□□ -1.09
UBR3-207ENST00000465630 SOS2Q07890 1332 aaPredicted RBP8.23□□□□□ -1.09
UBR3-207ENST00000465630 UPP2O95045 317 aa8.22□□□□□ -1.09
UBR3-207ENST00000465630 VSIG8P0DPA2 414 aa8.22□□□□□ -1.09
UBR3-207ENST00000465630 CBLBQ13191 982 aa8.22□□□□□ -1.09
UBR3-207ENST00000465630 PPP1R26Q5T8A7 1209 aaPredicted RBP8.22□□□□□ -1.09
UBR3-207ENST00000465630 EPS8L1Q8TE68 723 aa8.21□□□□□ -1.1
UBR3-207ENST00000465630 DDRGK1Q96HY6 314 aa8.21□□□□□ -1.1
UBR3-207ENST00000465630 HMX1Q9NP08 348 aaPredicted RBP8.21□□□□□ -1.1
UBR3-207ENST00000465630 PPFIA3O75145 1194 aa8.2□□□□□ -1.1
UBR3-207ENST00000465630 AP1G2O75843 785 aa8.2□□□□□ -1.1
UBR3-207ENST00000465630 KCTD15Q96SI1 283 aaPredicted RBP8.2□□□□□ -1.1
UBR3-207ENST00000465630 TSEN34Q9BSV6 310 aaKnown RBP8.2□□□□□ -1.1
UBR3-207ENST00000465630 SLC10A4Q96EP9 437 aa8.19□□□□□ -1.1
UBR3-207ENST00000465630 ATP1B4Q9UN42 357 aaPredicted RBP8.19□□□□□ -1.1
UBR3-207ENST00000465630 Q6ZVU0 165 aa8.18□□□□□ -1.1
UBR3-207ENST00000465630 ZBTB33Q86T24 672 aa8.18□□□□□ -1.1
UBR3-207ENST00000465630 ZC3H4Q9UPT8 1303 aaKnown RBP8.18□□□□□ -1.1
UBR3-207ENST00000465630 USP17L8P0C7I0 530 aa8.17□□□□□ -1.1
UBR3-207ENST00000465630 INTS6LQ5JSJ4 861 aaKnown RBP8.17□□□□□ -1.1
UBR3-207ENST00000465630 ADAM32Q8TC27 787 aa8.17□□□□□ -1.1
UBR3-207ENST00000465630 PGPEP1Q9NXJ5 209 aa8.17□□□□□ -1.1
UBR3-207ENST00000465630 TTLL8A6PVC2 850 aa8.16□□□□□ -1.1
UBR3-207ENST00000465630 AGBL1Q96MI9 1066 aa8.16□□□□□ -1.1
UBR3-207ENST00000465630 FAM181BA6NEQ2 426 aa8.15□□□□□ -1.1
UBR3-207ENST00000465630 FIGNL2A6NMB9 653 aa8.15□□□□□ -1.1
UBR3-207ENST00000465630 SPINT1O43278 529 aa8.15□□□□□ -1.1
UBR3-207ENST00000465630 PTK2Q05397 1052 aa8.15□□□□□ -1.1
UBR3-207ENST00000465630 BCANQ96GW7 911 aa8.15□□□□□ -1.1
UBR3-207ENST00000465630 CDV3Q9UKY7 258 aaKnown RBP8.15□□□□□ -1.1
UBR3-207ENST00000465630 RFC5P40937 340 aa8.14□□□□□ -1.11
UBR3-207ENST00000465630 PTSQ03393 145 aa8.14□□□□□ -1.11
UBR3-207ENST00000465630 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.14□□□□□ -1.11
UBR3-207ENST00000465630 GPSM3Q9Y4H4 160 aa8.14□□□□□ -1.11
UBR3-207ENST00000465630 DHX9Q08211 1270 aaKnown RBP8.13□□□□□ -1.11
UBR3-207ENST00000465630 GPR161Q8N6U8 529 aaKnown RBP8.13□□□□□ -1.11
UBR3-207ENST00000465630 TMPRSS4Q9NRS4 437 aa8.13□□□□□ -1.11
UBR3-207ENST00000465630 CTSOP43234 321 aaPredicted RBP8.12□□□□□ -1.11
UBR3-207ENST00000465630 RELBQ01201 579 aa8.12□□□□□ -1.11
UBR3-207ENST00000465630 KRT76Q01546 638 aa8.12□□□□□ -1.11
UBR3-207ENST00000465630 TRIM34Q9BYJ4 488 aa8.12□□□□□ -1.11
UBR3-207ENST00000465630 RAB15P59190 212 aa8.11□□□□□ -1.11
UBR3-207ENST00000465630 ZNF784Q8NCA9 323 aaPredicted RBP8.11□□□□□ -1.11
UBR3-207ENST00000465630 INSM2Q96T92 566 aaPredicted RBP8.11□□□□□ -1.11
UBR3-207ENST00000465630 NBPF20Q3BBV1 942 aa8.1□□□□□ -1.11
UBR3-207ENST00000465630 LILRA1O75019 489 aa8.09□□□□□ -1.11
UBR3-207ENST00000465630 ADD1P35611 737 aaKnown RBP8.09□□□□□ -1.11
UBR3-207ENST00000465630 CCDC155Q8N6L0 562 aa8.09□□□□□ -1.11
UBR3-207ENST00000465630 KDF1Q8NAX2 398 aaPredicted RBP8.09□□□□□ -1.11
UBR3-207ENST00000465630 ZNF395Q9H8N7 513 aaPredicted RBP8.09□□□□□ -1.11
UBR3-207ENST00000465630 SLC35F4A4IF30 521 aa8.08□□□□□ -1.12
UBR3-207ENST00000465630 ERVH48-1M5A8F1 160 aa8.08□□□□□ -1.12
UBR3-207ENST00000465630 DZIP3Q86Y13 1208 aaKnown RBP8.08□□□□□ -1.12
UBR3-207ENST00000465630 ESPNB1AK53 854 aa8.07□□□□□ -1.12
UBR3-207ENST00000465630 PNMA1Q8ND90 353 aa8.07□□□□□ -1.12
UBR3-207ENST00000465630 RNF217Q8TC41 542 aa8.07□□□□□ -1.12
UBR3-207ENST00000465630 CNTNAP3BQ96NU0 1288 aa8.07□□□□□ -1.12
UBR3-207ENST00000465630 CNTNAP3Q9BZ76 1288 aa8.07□□□□□ -1.12
UBR3-207ENST00000465630 ADH1AP07327 375 aa8.06□□□□□ -1.12
UBR3-207ENST00000465630 RNFT1Q5M7Z0 435 aa8.06□□□□□ -1.12
UBR3-207ENST00000465630 PCMTD1Q96MG8 357 aaPredicted RBP8.06□□□□□ -1.12
UBR3-207ENST00000465630 GOPCQ9HD26 462 aa8.06□□□□□ -1.12
UBR3-207ENST00000465630 POLMQ9NP87 494 aaPredicted RBP8.06□□□□□ -1.12
UBR3-207ENST00000465630 FOXD4L5Q5VV16 416 aaPredicted RBP8.05□□□□□ -1.12
UBR3-207ENST00000465630 NANOS1Q8WY41 292 aaKnown RBP8.05□□□□□ -1.12
UBR3-207ENST00000465630 SENP3-EIF4A1A0A087X0R7 540 aa8.04□□□□□ -1.12
UBR3-207ENST00000465630 ITGA6P23229 1130 aa8.04□□□□□ -1.12
UBR3-207ENST00000465630 IL27Q8NEV9 243 aa8.04□□□□□ -1.12
UBR3-207ENST00000465630 GJD4Q96KN9 370 aaPredicted RBP8.04□□□□□ -1.12
UBR3-207ENST00000465630 COL25A1Q9BXS0 654 aaPredicted RBP8.04□□□□□ -1.12
UBR3-207ENST00000465630 CYLDQ9NQC7 956 aa8.04□□□□□ -1.12
UBR3-207ENST00000465630 PTGIRP43119 386 aa8.03□□□□□ -1.12
UBR3-207ENST00000465630 NEUROD2Q15784 382 aa8.03□□□□□ -1.12
UBR3-207ENST00000465630 GIGYF1O75420 1035 aaPredicted RBP8.02□□□□□ -1.13
UBR3-207ENST00000465630 FBXO45P0C2W1 286 aa8.02□□□□□ -1.13
UBR3-207ENST00000465630 TMEM259Q4ZIN3 620 aa8.02□□□□□ -1.13
UBR3-207ENST00000465630 VWA5B2Q8N398 1253 aa8.02□□□□□ -1.13
UBR3-207ENST00000465630 CDC14CA4D256 554 aa8.01□□□□□ -1.13
UBR3-207ENST00000465630 ZBBXA8MT70 800 aa8.01□□□□□ -1.13
UBR3-207ENST00000465630 GSK3AP49840 483 aa8.01□□□□□ -1.13
UBR3-207ENST00000465630 SEPT12Q8IYM1 358 aa8□□□□□ -1.13
UBR3-207ENST00000465630 PCDHB9Q9Y5E1 797 aa8□□□□□ -1.13
UBR3-207ENST00000465630 SLC24A1O60721 1099 aa7.99□□□□□ -1.13
UBR3-207ENST00000465630 GPR37L1O60883 481 aa7.99□□□□□ -1.13
UBR3-207ENST00000465630 SV2AQ7L0J3 742 aa7.99□□□□□ -1.13
UBR3-207ENST00000465630 WHAMMQ8TF30 809 aa7.99□□□□□ -1.13
UBR3-207ENST00000465630 CUEDC1Q9NWM3 386 aaPredicted RBP7.99□□□□□ -1.13
UBR3-207ENST00000465630 ZNF385CQ66K41 422 aaPredicted RBP7.98□□□□□ -1.13
UBR3-207ENST00000465630 LYSMD3Q7Z3D4 306 aa7.98□□□□□ -1.13
UBR3-207ENST00000465630 RHOQP17081 205 aa7.97□□□□□ -1.13
UBR3-207ENST00000465630 BRPF1P55201 1214 aaPredicted RBP7.97□□□□□ -1.13
UBR3-207ENST00000465630 PRICKLE2Q7Z3G6 844 aa7.97□□□□□ -1.13
UBR3-207ENST00000465630 ATP5J2-PTCD1G3V325 749 aa7.96□□□□□ -1.14
UBR3-207ENST00000465630 SLURP2P0DP57 97 aa7.96□□□□□ -1.14
UBR3-207ENST00000465630 KCNMA1Q12791 1236 aa7.96□□□□□ -1.14
UBR3-207ENST00000465630 ADAMTS8Q9UP79 889 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms