RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 KIAA0232Q92628 1395 aa23.05■■□□□ 1.28
PTPRU-206ENST00000465525 ADAMTS2O95450 1211 aa23.04■■□□□ 1.28
PTPRU-206ENST00000465525 HOXC9P31274 260 aa23.04■■□□□ 1.28
PTPRU-206ENST00000465525 ILDR1Q86SU0 546 aaPredicted RBP23.04■■□□□ 1.28
PTPRU-206ENST00000465525 CHRNA2Q15822 529 aa23.03■■□□□ 1.28
PTPRU-206ENST00000465525 YTHDC1Q96MU7 727 aaKnown RBP23.03■■□□□ 1.28
PTPRU-206ENST00000465525 DIAPH1O60610 1272 aaKnown RBP23.03■■□□□ 1.28
PTPRU-206ENST00000465525 WDR43Q15061 677 aaKnown RBP eCLIP23.03■■□□□ 1.28
PTPRU-206ENST00000465525 PRDM11Q9NQV5 511 aa23.03■■□□□ 1.28
PTPRU-206ENST00000465525 INSRP06213 1382 aa23.02■■□□□ 1.28
PTPRU-206ENST00000465525 COL18A1P39060 1754 aa23.02■■□□□ 1.28
PTPRU-206ENST00000465525 LTV1Q96GA3 475 aaPredicted RBP23.02■■□□□ 1.28
PTPRU-206ENST00000465525 KIF24Q5T7B8 1368 aa23.02■■□□□ 1.28
PTPRU-206ENST00000465525 FAM83GA6ND36 823 aa23.01■■□□□ 1.27
PTPRU-206ENST00000465525 U2SURPO15042 1029 aaKnown RBP23.01■■□□□ 1.27
PTPRU-206ENST00000465525 RTL1A6NKG5 1358 aa23.01■■□□□ 1.27
PTPRU-206ENST00000465525 EIF4A2Q14240 407 aaKnown RBP23■■□□□ 1.27
PTPRU-206ENST00000465525 IP6K1Q92551 441 aa23■■□□□ 1.27
PTPRU-206ENST00000465525 ADAMTS8Q9UP79 889 aa23■■□□□ 1.27
PTPRU-206ENST00000465525 RGPD2P0DJD1 1756 aa22.99■■□□□ 1.27
PTPRU-206ENST00000465525 SENP3-EIF4A1A0A087X0R7 540 aa22.99■■□□□ 1.27
PTPRU-206ENST00000465525 IL13P35225 146 aa22.99■■□□□ 1.27
PTPRU-206ENST00000465525 AXIN2Q9Y2T1 843 aa22.99■■□□□ 1.27
PTPRU-206ENST00000465525 LRP6O75581 1613 aa22.98■■□□□ 1.27
PTPRU-206ENST00000465525 U2AF1L5P0DN76 240 aaPredicted RBP22.97■■□□□ 1.27
PTPRU-206ENST00000465525 U2AF1Q01081 240 aaKnown RBP eCLIP22.97■■□□□ 1.27
PTPRU-206ENST00000465525 MEX3CQ5U5Q3 659 aaKnown RBP22.97■■□□□ 1.27
PTPRU-206ENST00000465525 NUDCQ9Y266 331 aa22.97■■□□□ 1.27
PTPRU-206ENST00000465525 RGPD1P0DJD0 1748 aa22.96■■□□□ 1.27
PTPRU-206ENST00000465525 NGLY1Q96IV0 654 aa22.95■■□□□ 1.26
PTPRU-206ENST00000465525 LMO7Q8WWI1 1683 aa22.94■■□□□ 1.26
PTPRU-206ENST00000465525 ABCC6O95255 1503 aa22.94■■□□□ 1.26
PTPRU-206ENST00000465525 CCDC146Q8IYE0 955 aa22.94■■□□□ 1.26
PTPRU-206ENST00000465525 C8orf37Q96NL8 207 aa22.94■■□□□ 1.26
PTPRU-206ENST00000465525 COL14A1Q05707 1796 aaKnown RBP22.93■■□□□ 1.26
PTPRU-206ENST00000465525 BLMP54132 1417 aaPredicted RBP22.93■■□□□ 1.26
PTPRU-206ENST00000465525 CAMTA1Q9Y6Y1 1673 aa22.93■■□□□ 1.26
PTPRU-206ENST00000465525 HMOX1P09601 288 aa22.93■■□□□ 1.26
PTPRU-206ENST00000465525 ANKRD24Q8TF21 1146 aa22.93■■□□□ 1.26
PTPRU-206ENST00000465525 BTG4Q9NY30 223 aa22.92■■□□□ 1.26
PTPRU-206ENST00000465525 PLCH1Q4KWH8 1693 aa22.9■■□□□ 1.26
PTPRU-206ENST00000465525 FNBP4Q8N3X1 1017 aaPredicted RBP22.9■■□□□ 1.26
PTPRU-206ENST00000465525 AEBP1Q8IUX7 1158 aa22.9■■□□□ 1.26
PTPRU-206ENST00000465525 EYA1Q99502 592 aa22.9■■□□□ 1.26
PTPRU-206ENST00000465525 EVA1CP58658 441 aa22.89■■□□□ 1.25
PTPRU-206ENST00000465525 USHBP1Q8N6Y0 703 aa22.89■■□□□ 1.25
PTPRU-206ENST00000465525 SLIT2O94813 1529 aa22.88■■□□□ 1.25
PTPRU-206ENST00000465525 ERBB3P21860 1342 aa22.88■■□□□ 1.25
PTPRU-206ENST00000465525 HNRNPUQ00839 825 aaKnown RBP eCLIP22.87■■□□□ 1.25
PTPRU-206ENST00000465525 SULT6B1Q6IMI4 303 aa22.87■■□□□ 1.25
PTPRU-206ENST00000465525 CSB-PGBD3P0DP91 1061 aa22.87■■□□□ 1.25
PTPRU-206ENST00000465525 NBPF6Q5VWK0 638 aa22.87■■□□□ 1.25
PTPRU-206ENST00000465525 NBPF4Q96M43 638 aa22.87■■□□□ 1.25
PTPRU-206ENST00000465525 STRN4Q9NRL3 753 aa22.86■■□□□ 1.25
PTPRU-206ENST00000465525 COL5A2P05997 1499 aaPredicted RBP22.86■■□□□ 1.25
PTPRU-206ENST00000465525 IGSF1Q8N6C5 1336 aa22.85■■□□□ 1.25
PTPRU-206ENST00000465525 UNC5CLQ8IV45 518 aa22.85■■□□□ 1.25
PTPRU-206ENST00000465525 RSPH6AQ9H0K4 717 aa22.85■■□□□ 1.25
PTPRU-206ENST00000465525 FAM208AQ9UK61 1670 aaKnown RBP22.85■■□□□ 1.25
PTPRU-206ENST00000465525 PRKAR2BP31323 418 aa22.84■■□□□ 1.25
PTPRU-206ENST00000465525 USP21Q9UK80 565 aa22.84■■□□□ 1.25
PTPRU-206ENST00000465525 NWD2Q9ULI1 1742 aa22.84■■□□□ 1.25
PTPRU-206ENST00000465525 AFF2P51816 1311 aa22.84■■□□□ 1.25
PTPRU-206ENST00000465525 WDR17Q8IZU2 1322 aa22.84■■□□□ 1.25
PTPRU-206ENST00000465525 NLRP2Q9NX02 1062 aa22.84■■□□□ 1.25
PTPRU-206ENST00000465525 SALL2Q9Y467 1007 aaPredicted RBP22.83■■□□□ 1.24
PTPRU-206ENST00000465525 BCL9LQ86UU0 1499 aa22.83■■□□□ 1.24
PTPRU-206ENST00000465525 FCHSD2O94868 740 aa22.82■■□□□ 1.24
PTPRU-206ENST00000465525 RUNDC1Q96C34 613 aa22.82■■□□□ 1.24
PTPRU-206ENST00000465525 LARP1Q6PKG0 1096 aaKnown RBP22.81■■□□□ 1.24
PTPRU-206ENST00000465525 PLEKHF1Q96S99 279 aa22.81■■□□□ 1.24
PTPRU-206ENST00000465525 NRAPQ86VF7 1730 aa22.81■■□□□ 1.24
PTPRU-206ENST00000465525 TOM1L2Q6ZVM7 507 aa22.81■■□□□ 1.24
PTPRU-206ENST00000465525 APAF1O14727 1248 aa22.8■■□□□ 1.24
PTPRU-206ENST00000465525 PHACTR3Q96KR7 559 aa22.79■■□□□ 1.24
PTPRU-206ENST00000465525 RRP7AQ9Y3A4 280 aaKnown RBP22.79■■□□□ 1.24
PTPRU-206ENST00000465525 CARD10Q9BWT7 1032 aa22.78■■□□□ 1.24
PTPRU-206ENST00000465525 MAPK8IP3Q9UPT6 1336 aa22.78■■□□□ 1.24
PTPRU-206ENST00000465525 KDRP35968 1356 aa22.78■■□□□ 1.24
PTPRU-206ENST00000465525 CRB1P82279 1406 aa22.77■■□□□ 1.24
PTPRU-206ENST00000465525 VPS72Q15906 364 aa22.77■■□□□ 1.24
PTPRU-206ENST00000465525 ZNF772Q68DY9 489 aaPredicted RBP22.77■■□□□ 1.24
PTPRU-206ENST00000465525 TCP11L2Q8N4U5 519 aa22.77■■□□□ 1.24
PTPRU-206ENST00000465525 NEUROD2Q15784 382 aa22.76■■□□□ 1.23
PTPRU-206ENST00000465525 TRPC5Q9UL62 973 aaPredicted RBP22.76■■□□□ 1.23
PTPRU-206ENST00000465525 NCAPD2Q15021 1401 aa22.75■■□□□ 1.23
PTPRU-206ENST00000465525 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.75■■□□□ 1.23
PTPRU-206ENST00000465525 PNNQ9H307 717 aaKnown RBP22.75■■□□□ 1.23
PTPRU-206ENST00000465525 CCDC9Q9Y3X0 531 aaKnown RBP22.75■■□□□ 1.23
PTPRU-206ENST00000465525 DLG5Q8TDM6 1919 aa22.75■■□□□ 1.23
PTPRU-206ENST00000465525 USP35Q9P2H5 1018 aa22.74■■□□□ 1.23
PTPRU-206ENST00000465525 QTRT2Q9H974 415 aaKnown RBP22.74■■□□□ 1.23
PTPRU-206ENST00000465525 SPATA31A5Q5VU36 1347 aa22.74■■□□□ 1.23
PTPRU-206ENST00000465525 SPATA31A7Q8IWB4 1347 aa22.74■■□□□ 1.23
PTPRU-206ENST00000465525 NEFMP07197 916 aa22.73■■□□□ 1.23
PTPRU-206ENST00000465525 PHF23Q9BUL5 403 aaPredicted RBP22.73■■□□□ 1.23
PTPRU-206ENST00000465525 SPATA31A1Q5TZJ5 1347 aa22.73■■□□□ 1.23
PTPRU-206ENST00000465525 THRAP3Q9Y2W1 955 aaKnown RBP22.72■■□□□ 1.23
PTPRU-206ENST00000465525 ATRNO75882 1429 aa22.71■■□□□ 1.23
PTPRU-206ENST00000465525 TMPOP42166 694 aaKnown RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms