RNA–Protein interactions for RNA: ENST00000465271.5

CNIH4-205, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNIH4, Length 4,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-205ENST00000465271 SPATA31A3Q5VYP0 1347 aa12.05□□□□□ -0.48
CNIH4-205ENST00000465271 EP400Q96L91 3159 aa12.05□□□□□ -0.48
CNIH4-205ENST00000465271 FBLN1P23142 703 aa12.05□□□□□ -0.48
CNIH4-205ENST00000465271 SLIT2O94813 1529 aa12.04□□□□□ -0.48
CNIH4-205ENST00000465271 MTHFSP49914 203 aa12.04□□□□□ -0.48
CNIH4-205ENST00000465271 GGNBP2Q9H3C7 697 aa12.04□□□□□ -0.48
CNIH4-205ENST00000465271 CEMIPQ8WUJ3 1361 aa12.03□□□□□ -0.48
CNIH4-205ENST00000465271 MAP3K19Q56UN5 1328 aa12.03□□□□□ -0.48
CNIH4-205ENST00000465271 ZNF853P0CG23 659 aa12.03□□□□□ -0.48
CNIH4-205ENST00000465271 SRPK2P78362 688 aaKnown RBP12.03□□□□□ -0.48
CNIH4-205ENST00000465271 FLT4P35916 1363 aa12.03□□□□□ -0.48
CNIH4-205ENST00000465271 HEG1Q9ULI3 1381 aa12.03□□□□□ -0.48
CNIH4-205ENST00000465271 DOT1LQ8TEK3 1739 aa12.03□□□□□ -0.48
CNIH4-205ENST00000465271 RGS12O14924 1447 aa12.03□□□□□ -0.48
CNIH4-205ENST00000465271 KCPQ6ZWJ8 1503 aa12.02□□□□□ -0.48
CNIH4-205ENST00000465271 MEGF6O75095 1541 aa12.02□□□□□ -0.49
CNIH4-205ENST00000465271 DUSP27Q5VZP5 1158 aa12.02□□□□□ -0.49
CNIH4-205ENST00000465271 PHF8Q9UPP1 1060 aa12.02□□□□□ -0.49
CNIH4-205ENST00000465271 TAF1LQ8IZX4 1826 aa12.01□□□□□ -0.49
CNIH4-205ENST00000465271 RGPD3A6NKT7 1758 aaPredicted RBP12.01□□□□□ -0.49
CNIH4-205ENST00000465271 RGPD4Q7Z3J3 1758 aa12.01□□□□□ -0.49
CNIH4-205ENST00000465271 EMILIN1Q9Y6C2 1016 aa12.01□□□□□ -0.49
CNIH4-205ENST00000465271 ARHGEF25Q86VW2 580 aa12.01□□□□□ -0.49
CNIH4-205ENST00000465271 RBM33Q96EV2 1170 aaKnown RBP12.01□□□□□ -0.49
CNIH4-205ENST00000465271 MRS2Q9HD23 443 aa12.01□□□□□ -0.49
CNIH4-205ENST00000465271 BCORQ6W2J9 1755 aa12□□□□□ -0.49
CNIH4-205ENST00000465271 BRWD3Q6RI45 1802 aa12□□□□□ -0.49
CNIH4-205ENST00000465271 NHSQ6T4R5 1651 aa12□□□□□ -0.49
CNIH4-205ENST00000465271 EIF4A2Q14240 407 aaKnown RBP12□□□□□ -0.49
CNIH4-205ENST00000465271 COL24A1Q17RW2 1714 aa11.99□□□□□ -0.49
CNIH4-205ENST00000465271 HDGFL2Q7Z4V5 671 aaPredicted RBP11.98□□□□□ -0.49
CNIH4-205ENST00000465271 ARFGEF2Q9Y6D5 1785 aa11.98□□□□□ -0.49
CNIH4-205ENST00000465271 HOXC9P31274 260 aa11.98□□□□□ -0.49
CNIH4-205ENST00000465271 SENP3Q9H4L4 574 aaPredicted RBP11.97□□□□□ -0.49
CNIH4-205ENST00000465271 SLFN5Q08AF3 891 aa11.97□□□□□ -0.49
CNIH4-205ENST00000465271 AXIN2Q9Y2T1 843 aa11.97□□□□□ -0.49
CNIH4-205ENST00000465271 A0A1B0GUL6 1792 aa11.97□□□□□ -0.49
CNIH4-205ENST00000465271 ANKRD36CQ5JPF3 1778 aa11.97□□□□□ -0.49
CNIH4-205ENST00000465271 KDM6AO15550 1401 aaPredicted RBP11.96□□□□□ -0.49
CNIH4-205ENST00000465271 TNS2Q63HR2 1409 aa11.96□□□□□ -0.5
CNIH4-205ENST00000465271 PHACTR3Q96KR7 559 aa11.95□□□□□ -0.5
CNIH4-205ENST00000465271 LAMB2P55268 1798 aa11.95□□□□□ -0.5
CNIH4-205ENST00000465271 TNS1Q9HBL0 1735 aaKnown RBP11.95□□□□□ -0.5
CNIH4-205ENST00000465271 PMFBP1Q8TBY8 1022 aa11.94□□□□□ -0.5
CNIH4-205ENST00000465271 WWC1Q8IX03 1113 aa11.94□□□□□ -0.5
CNIH4-205ENST00000465271 IL16Q14005 1332 aa11.94□□□□□ -0.5
CNIH4-205ENST00000465271 MORC1Q86VD1 984 aa11.94□□□□□ -0.5
CNIH4-205ENST00000465271 NGEFQ8N5V2 710 aa11.94□□□□□ -0.5
CNIH4-205ENST00000465271 IP6K1Q92551 441 aa11.93□□□□□ -0.5
CNIH4-205ENST00000465271 QSER1Q2KHR3 1735 aa11.93□□□□□ -0.5
CNIH4-205ENST00000465271 BRPF1P55201 1214 aaPredicted RBP11.93□□□□□ -0.5
CNIH4-205ENST00000465271 IBTKQ9P2D0 1353 aaPredicted RBP11.92□□□□□ -0.5
CNIH4-205ENST00000465271 FCHSD2O94868 740 aa11.92□□□□□ -0.5
CNIH4-205ENST00000465271 BCL9LQ86UU0 1499 aa11.92□□□□□ -0.5
CNIH4-205ENST00000465271 HSP90AB2PQ58FF8 381 aa11.92□□□□□ -0.5
CNIH4-205ENST00000465271 CADPS2Q86UW7 1296 aa11.92□□□□□ -0.5
CNIH4-205ENST00000465271 PDE3BQ13370 1112 aa11.92□□□□□ -0.5
CNIH4-205ENST00000465271 TMC1Q8TDI8 760 aa11.92□□□□□ -0.5
CNIH4-205ENST00000465271 CDCA7LQ96GN5 454 aa11.92□□□□□ -0.5
CNIH4-205ENST00000465271 RRS1Q15050 365 aaKnown RBP11.91□□□□□ -0.5
CNIH4-205ENST00000465271 SLAIN2Q9P270 581 aa11.91□□□□□ -0.5
CNIH4-205ENST00000465271 DDX17Q92841 729 aaKnown RBP11.91□□□□□ -0.5
CNIH4-205ENST00000465271 RUNDC1Q96C34 613 aa11.91□□□□□ -0.5
CNIH4-205ENST00000465271 PROSER2Q86WR7 435 aaPredicted RBP11.9□□□□□ -0.5
CNIH4-205ENST00000465271 ERBB3P21860 1342 aa11.9□□□□□ -0.5
CNIH4-205ENST00000465271 NUDCQ9Y266 331 aa11.9□□□□□ -0.5
CNIH4-205ENST00000465271 BCL9O00512 1426 aa11.89□□□□□ -0.51
CNIH4-205ENST00000465271 WDR63Q8IWG1 891 aa11.89□□□□□ -0.51
CNIH4-205ENST00000465271 EYA1Q99502 592 aa11.89□□□□□ -0.51
CNIH4-205ENST00000465271 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.89□□□□□ -0.51
CNIH4-205ENST00000465271 C4AP0C0L4 1744 aa11.88□□□□□ -0.51
CNIH4-205ENST00000465271 C4BP0C0L5 1744 aa11.88□□□□□ -0.51
CNIH4-205ENST00000465271 GCP02774 474 aa11.88□□□□□ -0.51
CNIH4-205ENST00000465271 TMPOP42166 694 aaKnown RBP11.88□□□□□ -0.51
CNIH4-205ENST00000465271 AEBP1Q8IUX7 1158 aa11.88□□□□□ -0.51
CNIH4-205ENST00000465271 KRT28Q7Z3Y7 464 aa11.88□□□□□ -0.51
CNIH4-205ENST00000465271 NPHP3Q7Z494 1330 aa11.87□□□□□ -0.51
CNIH4-205ENST00000465271 COG3Q96JB2 828 aa11.87□□□□□ -0.51
CNIH4-205ENST00000465271 BTAF1O14981 1849 aa11.87□□□□□ -0.51
CNIH4-205ENST00000465271 SCN7AQ01118 1682 aa11.87□□□□□ -0.51
CNIH4-205ENST00000465271 TCP11L2Q8N4U5 519 aa11.86□□□□□ -0.51
CNIH4-205ENST00000465271 DIAPH1O60610 1272 aaKnown RBP11.85□□□□□ -0.51
CNIH4-205ENST00000465271 NBPF6Q5VWK0 638 aa11.85□□□□□ -0.51
CNIH4-205ENST00000465271 FAM9BQ8IZU0 186 aa11.85□□□□□ -0.51
CNIH4-205ENST00000465271 NBPF4Q96M43 638 aa11.85□□□□□ -0.51
CNIH4-205ENST00000465271 ESCO1Q5FWF5 840 aa11.84□□□□□ -0.51
CNIH4-205ENST00000465271 KIAA0232Q92628 1395 aa11.84□□□□□ -0.51
CNIH4-205ENST00000465271 DDX60Q8IY21 1712 aaKnown RBP11.84□□□□□ -0.51
CNIH4-205ENST00000465271 APAF1O14727 1248 aa11.84□□□□□ -0.51
CNIH4-205ENST00000465271 ZNF646O15015 1829 aaPredicted RBP11.83□□□□□ -0.52
CNIH4-205ENST00000465271 PXDNLA1KZ92 1463 aa11.83□□□□□ -0.52
CNIH4-205ENST00000465271 FOXO3O43524 673 aa11.83□□□□□ -0.52
CNIH4-205ENST00000465271 PLPPR3Q6T4P5 718 aa11.83□□□□□ -0.52
CNIH4-205ENST00000465271 AFDNP55196 1824 aaKnown RBP11.83□□□□□ -0.52
CNIH4-205ENST00000465271 LRP10Q7Z4F1 713 aa11.83□□□□□ -0.52
CNIH4-205ENST00000465271 MYH14Q7Z406 1995 aaKnown RBP11.82□□□□□ -0.52
CNIH4-205ENST00000465271 HNRNPUQ00839 825 aaKnown RBP eCLIP11.82□□□□□ -0.52
CNIH4-205ENST00000465271 KCNH5Q8NCM2 988 aa11.82□□□□□ -0.52
CNIH4-205ENST00000465271 NUTM2FA1L443 756 aa11.82□□□□□ -0.52
CNIH4-205ENST00000465271 NFE2L2Q16236 605 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms