RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 HSPA1LP34931 641 aa17.94■□□□□ 0.46
ATF3-208ENST00000465155 PNISRQ8TF01 805 aaKnown RBP17.94■□□□□ 0.46
ATF3-208ENST00000465155 RTL1A6NKG5 1358 aa17.94■□□□□ 0.46
ATF3-208ENST00000465155 HOXC9P31274 260 aa17.94■□□□□ 0.46
ATF3-208ENST00000465155 DIAPH1O60610 1272 aaKnown RBP17.93■□□□□ 0.46
ATF3-208ENST00000465155 HSP90AB2PQ58FF8 381 aa17.93■□□□□ 0.46
ATF3-208ENST00000465155 RGPD5Q99666 1765 aa17.93■□□□□ 0.46
ATF3-208ENST00000465155 KIAA0232Q92628 1395 aa17.93■□□□□ 0.46
ATF3-208ENST00000465155 WDR43Q15061 677 aaKnown RBP eCLIP17.92■□□□□ 0.46
ATF3-208ENST00000465155 CPDO75976 1380 aa17.92■□□□□ 0.46
ATF3-208ENST00000465155 JCADQ9P266 1359 aa17.92■□□□□ 0.46
ATF3-208ENST00000465155 IP6K1Q92551 441 aa17.91■□□□□ 0.46
ATF3-208ENST00000465155 COL18A1P39060 1754 aa17.91■□□□□ 0.46
ATF3-208ENST00000465155 NUDCQ9Y266 331 aa17.9■□□□□ 0.46
ATF3-208ENST00000465155 U2SURPO15042 1029 aaKnown RBP17.89■□□□□ 0.45
ATF3-208ENST00000465155 IL13P35225 146 aa17.89■□□□□ 0.45
ATF3-208ENST00000465155 EIF4A2Q14240 407 aaKnown RBP17.89■□□□□ 0.45
ATF3-208ENST00000465155 CHRNA2Q15822 529 aa17.89■□□□□ 0.45
ATF3-208ENST00000465155 PRDM11Q9NQV5 511 aa17.89■□□□□ 0.45
ATF3-208ENST00000465155 ABCC6O95255 1503 aa17.89■□□□□ 0.45
ATF3-208ENST00000465155 ADAMTS8Q9UP79 889 aa17.88■□□□□ 0.45
ATF3-208ENST00000465155 AXIN2Q9Y2T1 843 aa17.88■□□□□ 0.45
ATF3-208ENST00000465155 BLMP54132 1417 aaPredicted RBP17.88■□□□□ 0.45
ATF3-208ENST00000465155 NUTM2BA6NNL0 878 aaPredicted RBP17.87■□□□□ 0.45
ATF3-208ENST00000465155 NUTM2EB1AL46 878 aaPredicted RBP17.87■□□□□ 0.45
ATF3-208ENST00000465155 NUTM2AQ8IVF1 878 aaPredicted RBP17.87■□□□□ 0.45
ATF3-208ENST00000465155 LTV1Q96GA3 475 aaPredicted RBP17.87■□□□□ 0.45
ATF3-208ENST00000465155 LMO7Q8WWI1 1683 aa17.87■□□□□ 0.45
ATF3-208ENST00000465155 U2AF1L5P0DN76 240 aaPredicted RBP17.87■□□□□ 0.45
ATF3-208ENST00000465155 U2AF1Q01081 240 aaKnown RBP eCLIP17.87■□□□□ 0.45
ATF3-208ENST00000465155 RGPD1P0DJD0 1748 aa17.86■□□□□ 0.45
ATF3-208ENST00000465155 COL14A1Q05707 1796 aaKnown RBP17.85■□□□□ 0.45
ATF3-208ENST00000465155 ADAMTS2O95450 1211 aa17.85■□□□□ 0.45
ATF3-208ENST00000465155 RGPD2P0DJD1 1756 aa17.85■□□□□ 0.45
ATF3-208ENST00000465155 FAM83GA6ND36 823 aa17.84■□□□□ 0.45
ATF3-208ENST00000465155 SPATA31A6Q5VVP1 1343 aa17.84■□□□□ 0.45
ATF3-208ENST00000465155 KCNA4P22459 653 aa17.83■□□□□ 0.45
ATF3-208ENST00000465155 ANKRD24Q8TF21 1146 aa17.83■□□□□ 0.45
ATF3-208ENST00000465155 CAMTA1Q9Y6Y1 1673 aa17.83■□□□□ 0.45
ATF3-208ENST00000465155 FBXO41Q8TF61 875 aa17.83■□□□□ 0.44
ATF3-208ENST00000465155 YTHDC1Q96MU7 727 aaKnown RBP17.83■□□□□ 0.44
ATF3-208ENST00000465155 ERBB3P21860 1342 aa17.82■□□□□ 0.44
ATF3-208ENST00000465155 PLCH1Q4KWH8 1693 aa17.82■□□□□ 0.44
ATF3-208ENST00000465155 FAM208AQ9UK61 1670 aaKnown RBP17.82■□□□□ 0.44
ATF3-208ENST00000465155 EYA1Q99502 592 aa17.81■□□□□ 0.44
ATF3-208ENST00000465155 HMOX1P09601 288 aa17.8■□□□□ 0.44
ATF3-208ENST00000465155 RNF216Q9NWF9 866 aaPredicted RBP17.8■□□□□ 0.44
ATF3-208ENST00000465155 LRP6O75581 1613 aa17.8■□□□□ 0.44
ATF3-208ENST00000465155 COL5A2P05997 1499 aaPredicted RBP17.8■□□□□ 0.44
ATF3-208ENST00000465155 IGSF1Q8N6C5 1336 aa17.8■□□□□ 0.44
ATF3-208ENST00000465155 CCDC146Q8IYE0 955 aa17.8■□□□□ 0.44
ATF3-208ENST00000465155 CSB-PGBD3P0DP91 1061 aa17.79■□□□□ 0.44
ATF3-208ENST00000465155 SULT6B1Q6IMI4 303 aa17.79■□□□□ 0.44
ATF3-208ENST00000465155 BTG4Q9NY30 223 aa17.79■□□□□ 0.44
ATF3-208ENST00000465155 FCHSD2O94868 740 aa17.78■□□□□ 0.44
ATF3-208ENST00000465155 HOXD11P31277 338 aaPredicted RBP17.78■□□□□ 0.44
ATF3-208ENST00000465155 NBPF6Q5VWK0 638 aa17.78■□□□□ 0.44
ATF3-208ENST00000465155 AEBP1Q8IUX7 1158 aa17.78■□□□□ 0.44
ATF3-208ENST00000465155 NBPF4Q96M43 638 aa17.78■□□□□ 0.44
ATF3-208ENST00000465155 RSPH6AQ9H0K4 717 aa17.78■□□□□ 0.44
ATF3-208ENST00000465155 USHBP1Q8N6Y0 703 aa17.77■□□□□ 0.44
ATF3-208ENST00000465155 EVA1CP58658 441 aa17.76■□□□□ 0.43
ATF3-208ENST00000465155 PNNQ9H307 717 aaKnown RBP17.76■□□□□ 0.43
ATF3-208ENST00000465155 STRN4Q9NRL3 753 aa17.76■□□□□ 0.43
ATF3-208ENST00000465155 NWD2Q9ULI1 1742 aa17.76■□□□□ 0.43
ATF3-208ENST00000465155 WDR17Q8IZU2 1322 aa17.76■□□□□ 0.43
ATF3-208ENST00000465155 NRAPQ86VF7 1730 aa17.76■□□□□ 0.43
ATF3-208ENST00000465155 SENP3-EIF4A1A0A087X0R7 540 aa17.76■□□□□ 0.43
ATF3-208ENST00000465155 PRKAR2BP31323 418 aa17.76■□□□□ 0.43
ATF3-208ENST00000465155 HNRNPUQ00839 825 aaKnown RBP eCLIP17.76■□□□□ 0.43
ATF3-208ENST00000465155 RUNDC1Q96C34 613 aa17.76■□□□□ 0.43
ATF3-208ENST00000465155 C8orf37Q96NL8 207 aa17.76■□□□□ 0.43
ATF3-208ENST00000465155 PLEKHF1Q96S99 279 aa17.76■□□□□ 0.43
ATF3-208ENST00000465155 NLRP2Q9NX02 1062 aa17.76■□□□□ 0.43
ATF3-208ENST00000465155 KDRP35968 1356 aa17.75■□□□□ 0.43
ATF3-208ENST00000465155 NCAPD2Q15021 1401 aa17.74■□□□□ 0.43
ATF3-208ENST00000465155 MEX3CQ5U5Q3 659 aaKnown RBP17.74■□□□□ 0.43
ATF3-208ENST00000465155 MAPK8IP3Q9UPT6 1336 aa17.74■□□□□ 0.43
ATF3-208ENST00000465155 TOM1L2Q6ZVM7 507 aa17.73■□□□□ 0.43
ATF3-208ENST00000465155 NGLY1Q96IV0 654 aa17.73■□□□□ 0.43
ATF3-208ENST00000465155 SLIT2O94813 1529 aa17.73■□□□□ 0.43
ATF3-208ENST00000465155 NPM3O75607 178 aaKnown RBP17.72■□□□□ 0.43
ATF3-208ENST00000465155 NEFMP07197 916 aa17.72■□□□□ 0.43
ATF3-208ENST00000465155 LARP1Q6PKG0 1096 aaKnown RBP17.72■□□□□ 0.43
ATF3-208ENST00000465155 APAF1O14727 1248 aa17.72■□□□□ 0.43
ATF3-208ENST00000465155 TCP11L2Q8N4U5 519 aa17.71■□□□□ 0.43
ATF3-208ENST00000465155 CRB1P82279 1406 aa17.71■□□□□ 0.42
ATF3-208ENST00000465155 PHACTR3Q96KR7 559 aa17.7■□□□□ 0.42
ATF3-208ENST00000465155 SALL2Q9Y467 1007 aaPredicted RBP17.7■□□□□ 0.42
ATF3-208ENST00000465155 CARD10Q9BWT7 1032 aa17.69■□□□□ 0.42
ATF3-208ENST00000465155 FNBP4Q8N3X1 1017 aaPredicted RBP17.68■□□□□ 0.42
ATF3-208ENST00000465155 USP35Q9P2H5 1018 aa17.68■□□□□ 0.42
ATF3-208ENST00000465155 RRP7AQ9Y3A4 280 aaKnown RBP17.68■□□□□ 0.42
ATF3-208ENST00000465155 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.68■□□□□ 0.42
ATF3-208ENST00000465155 BCL9LQ86UU0 1499 aa17.67■□□□□ 0.42
ATF3-208ENST00000465155 DLG5Q8TDM6 1919 aa17.67■□□□□ 0.42
ATF3-208ENST00000465155 NEUROD2Q15784 382 aa17.67■□□□□ 0.42
ATF3-208ENST00000465155 UNC5CLQ8IV45 518 aa17.67■□□□□ 0.42
ATF3-208ENST00000465155 TMPOP42166 694 aaKnown RBP17.66■□□□□ 0.42
ATF3-208ENST00000465155 RAPGEF4Q8WZA2 1011 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms