RNA–Protein interactions for RNA: ENST00000464976.1

RAPGEF4-206, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best)

Gene RAPGEF4, Length 980 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-206ENST00000464976 GIGYF1O75420 1035 aaPredicted RBP8.91□□□□□ -0.98
RAPGEF4-206ENST00000464976 ARID5BQ14865 1188 aa8.91□□□□□ -0.98
RAPGEF4-206ENST00000464976 NBPF20Q3BBV1 942 aa8.91□□□□□ -0.98
RAPGEF4-206ENST00000464976 CDCA8Q53HL2 280 aa8.91□□□□□ -0.98
RAPGEF4-206ENST00000464976 RC3H1Q5TC82 1133 aaKnown RBP8.91□□□□□ -0.98
RAPGEF4-206ENST00000464976 C1QTNF2Q9BXJ5 285 aa8.91□□□□□ -0.98
RAPGEF4-206ENST00000464976 USP17L5A8MUK1 530 aa8.9□□□□□ -0.98
RAPGEF4-206ENST00000464976 RAB15P59190 212 aa8.9□□□□□ -0.98
RAPGEF4-206ENST00000464976 DEPDC4Q8N2C3 294 aa8.9□□□□□ -0.98
RAPGEF4-206ENST00000464976 USP17L3A6NCW0 530 aa8.89□□□□□ -0.99
RAPGEF4-206ENST00000464976 USP17L4A6NCW7 530 aa8.89□□□□□ -0.99
RAPGEF4-206ENST00000464976 RNF20Q5VTR2 975 aa8.89□□□□□ -0.99
RAPGEF4-206ENST00000464976 USP17L2Q6R6M4 530 aa8.89□□□□□ -0.99
RAPGEF4-206ENST00000464976 VASH1Q7L8A9 365 aaPredicted RBP8.89□□□□□ -0.99
RAPGEF4-206ENST00000464976 USP17L1Q7RTZ2 530 aa8.89□□□□□ -0.99
RAPGEF4-206ENST00000464976 TRMT44Q8IYL2 757 aaKnown RBP8.89□□□□□ -0.99
RAPGEF4-206ENST00000464976 PHTF2Q8N3S3 785 aa8.89□□□□□ -0.99
RAPGEF4-206ENST00000464976 PLPP7Q8NBV4 271 aa8.89□□□□□ -0.99
RAPGEF4-206ENST00000464976 EMID1Q96A84 441 aaPredicted RBP8.89□□□□□ -0.99
RAPGEF4-206ENST00000464976 CDV3Q9UKY7 258 aaKnown RBP8.89□□□□□ -0.99
RAPGEF4-206ENST00000464976 PRKD2Q9BZL6 878 aa8.88□□□□□ -0.99
RAPGEF4-206ENST00000464976 KCTD15Q96SI1 283 aaPredicted RBP8.87□□□□□ -0.99
RAPGEF4-206ENST00000464976 VRTNQ9H8Y1 702 aa8.87□□□□□ -0.99
RAPGEF4-206ENST00000464976 DOLKQ9UPQ8 538 aa8.87□□□□□ -0.99
RAPGEF4-206ENST00000464976 NCOA4Q13772 614 aa8.86□□□□□ -0.99
RAPGEF4-206ENST00000464976 MAP7D1Q3KQU3 841 aa8.86□□□□□ -0.99
RAPGEF4-206ENST00000464976 TSGA10IPQ3SY00 556 aa8.86□□□□□ -0.99
RAPGEF4-206ENST00000464976 CCDC85AQ96PX6 553 aaPredicted RBP8.86□□□□□ -0.99
RAPGEF4-206ENST00000464976 LCE2BO14633 110 aa8.85□□□□□ -0.99
RAPGEF4-206ENST00000464976 PDIA4P13667 645 aaKnown RBP8.85□□□□□ -0.99
RAPGEF4-206ENST00000464976 EML3Q32P44 896 aa8.85□□□□□ -0.99
RAPGEF4-206ENST00000464976 OXLD1Q5BKU9 147 aa8.85□□□□□ -0.99
RAPGEF4-206ENST00000464976 SPRYD7Q5W111 196 aa8.85□□□□□ -0.99
RAPGEF4-206ENST00000464976 PLEKHM2Q8IWE5 1019 aa8.85□□□□□ -0.99
RAPGEF4-206ENST00000464976 TLL2Q9Y6L7 1015 aa8.85□□□□□ -0.99
RAPGEF4-206ENST00000464976 ESPNB1AK53 854 aa8.84□□□□□ -0.99
RAPGEF4-206ENST00000464976 WNT7AO00755 349 aa8.84□□□□□ -0.99
RAPGEF4-206ENST00000464976 SRPK2P78362 688 aaKnown RBP8.84□□□□□ -0.99
RAPGEF4-206ENST00000464976 FOXC1Q12948 553 aa8.84□□□□□ -0.99
RAPGEF4-206ENST00000464976 KANK4Q5T7N3 995 aaPredicted RBP8.84□□□□□ -0.99
RAPGEF4-206ENST00000464976 ZNF697Q5TEC3 545 aa8.84□□□□□ -0.99
RAPGEF4-206ENST00000464976 SEPT12Q8IYM1 358 aa8.84□□□□□ -0.99
RAPGEF4-206ENST00000464976 RETREG2Q8NC44 543 aa8.84□□□□□ -0.99
RAPGEF4-206ENST00000464976 MRGPRX2Q96LB1 330 aa8.84□□□□□ -0.99
RAPGEF4-206ENST00000464976 MKRN1Q9UHC7 482 aaKnown RBP8.84□□□□□ -0.99
RAPGEF4-206ENST00000464976 MAP4K5Q9Y4K4 846 aa8.84□□□□□ -0.99
RAPGEF4-206ENST00000464976 PCDHB11Q9Y5F2 797 aa8.84□□□□□ -0.99
RAPGEF4-206ENST00000464976 LZTS3O60299 673 aaPredicted RBP8.83□□□□□ -1
RAPGEF4-206ENST00000464976 CSB-PGBD3P0DP91 1061 aa8.83□□□□□ -1
RAPGEF4-206ENST00000464976 CHIC2Q9UKJ5 165 aa8.83□□□□□ -1
RAPGEF4-206ENST00000464976 FSHRP23945 695 aa8.82□□□□□ -1
RAPGEF4-206ENST00000464976 INTS6LQ5JSJ4 861 aaKnown RBP8.82□□□□□ -1
RAPGEF4-206ENST00000464976 TRAF7Q6Q0C0 670 aa8.82□□□□□ -1
RAPGEF4-206ENST00000464976 Q6ZNB5 142 aa8.82□□□□□ -1
RAPGEF4-206ENST00000464976 ZNF598Q86UK7 904 aaKnown RBP8.82□□□□□ -1
RAPGEF4-206ENST00000464976 NOD1Q9Y239 953 aa8.82□□□□□ -1
RAPGEF4-206ENST00000464976 V9GY48 417 aaPredicted RBP8.82□□□□□ -1
RAPGEF4-206ENST00000464976 ATP5J2-PTCD1G3V325 749 aa8.81□□□□□ -1
RAPGEF4-206ENST00000464976 GFRA3O60609 400 aa8.81□□□□□ -1
RAPGEF4-206ENST00000464976 RASA1P20936 1047 aa8.81□□□□□ -1
RAPGEF4-206ENST00000464976 LARP1Q6PKG0 1096 aaKnown RBP8.81□□□□□ -1
RAPGEF4-206ENST00000464976 CCDC125Q86Z20 511 aa8.81□□□□□ -1
RAPGEF4-206ENST00000464976 CDK15Q96Q40 435 aa8.81□□□□□ -1
RAPGEF4-206ENST00000464976 CDCA7Q9BWT1 371 aaPredicted RBP8.81□□□□□ -1
RAPGEF4-206ENST00000464976 ESF1Q9H501 851 aaKnown RBP8.81□□□□□ -1
RAPGEF4-206ENST00000464976 SIAH2O43255 324 aa8.8□□□□□ -1
RAPGEF4-206ENST00000464976 ATG7O95352 703 aa8.8□□□□□ -1
RAPGEF4-206ENST00000464976 TRIM50Q86XT4 487 aa8.8□□□□□ -1
RAPGEF4-206ENST00000464976 ERVH48-1M5A8F1 160 aa8.79□□□□□ -1
RAPGEF4-206ENST00000464976 ADH1CP00326 375 aa8.79□□□□□ -1
RAPGEF4-206ENST00000464976 ALDH1A1P00352 501 aa8.79□□□□□ -1
RAPGEF4-206ENST00000464976 GRM5P41594 1212 aa8.79□□□□□ -1
RAPGEF4-206ENST00000464976 USP4Q13107 963 aa8.79□□□□□ -1
RAPGEF4-206ENST00000464976 SIRT1Q96EB6 747 aa8.79□□□□□ -1
RAPGEF4-206ENST00000464976 MYCP01106 439 aaPredicted RBP8.78□□□□□ -1
RAPGEF4-206ENST00000464976 PSME1Q06323 249 aa8.78□□□□□ -1
RAPGEF4-206ENST00000464976 DHX9Q08211 1270 aaKnown RBP8.78□□□□□ -1
RAPGEF4-206ENST00000464976 PDE4CQ08493 712 aa8.78□□□□□ -1
RAPGEF4-206ENST00000464976 LAPTM4AQ15012 233 aa8.78□□□□□ -1
RAPGEF4-206ENST00000464976 OGFOD1Q8N543 542 aa8.78□□□□□ -1
RAPGEF4-206ENST00000464976 MPNDQ8N594 471 aa8.78□□□□□ -1
RAPGEF4-206ENST00000464976 USP17L15C9J2P7 530 aa8.77□□□□□ -1.01
RAPGEF4-206ENST00000464976 USP17L10C9JJH3 530 aa8.77□□□□□ -1.01
RAPGEF4-206ENST00000464976 USP17L13C9JLJ4 530 aa8.77□□□□□ -1.01
RAPGEF4-206ENST00000464976 USP17L12C9JPN9 530 aa8.77□□□□□ -1.01
RAPGEF4-206ENST00000464976 USP17L11C9JVI0 530 aa8.77□□□□□ -1.01
RAPGEF4-206ENST00000464976 USP17L21D6R901 530 aa8.77□□□□□ -1.01
RAPGEF4-206ENST00000464976 USP17L18D6R9N7 530 aa8.77□□□□□ -1.01
RAPGEF4-206ENST00000464976 USP17L22D6RA61 530 aa8.77□□□□□ -1.01
RAPGEF4-206ENST00000464976 USP17L17D6RBQ6 530 aa8.77□□□□□ -1.01
RAPGEF4-206ENST00000464976 USP17L19D6RCP7 530 aa8.77□□□□□ -1.01
RAPGEF4-206ENST00000464976 USP17L20D6RJB6 530 aa8.77□□□□□ -1.01
RAPGEF4-206ENST00000464976 ATP1A2P50993 1020 aa8.77□□□□□ -1.01
RAPGEF4-206ENST00000464976 GTF2IP78347 998 aa8.77□□□□□ -1.01
RAPGEF4-206ENST00000464976 USP17L24Q0WX57 530 aa8.77□□□□□ -1.01
RAPGEF4-206ENST00000464976 NR5A1Q13285 461 aa8.77□□□□□ -1.01
RAPGEF4-206ENST00000464976 CRTC2Q53ET0 693 aaPredicted RBP8.77□□□□□ -1.01
RAPGEF4-206ENST00000464976 ZNF594Q96JF6 807 aaPredicted RBP8.77□□□□□ -1.01
RAPGEF4-206ENST00000464976 DNAAF2Q9NVR5 837 aaKnown RBP8.77□□□□□ -1.01
RAPGEF4-206ENST00000464976 NOVA2Q9UNW9 492 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms