RNA–Protein interactions for RNA: ENST00000464976.1

RAPGEF4-206, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best)

Gene RAPGEF4, Length 980 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-206ENST00000464976 AEBP2Q6ZN18 517 aaPredicted RBP23.11■■□□□ 1.29
RAPGEF4-206ENST00000464976 CHIC1Q5VXU3 224 aa21.96■■□□□ 1.11
RAPGEF4-206ENST00000464976 SENP3Q9H4L4 574 aaPredicted RBP19.58■□□□□ 0.72
RAPGEF4-206ENST00000464976 PHF23Q9BUL5 403 aaPredicted RBP19.39■□□□□ 0.69
RAPGEF4-206ENST00000464976 FOXD1Q16676 465 aa18.32■□□□□ 0.52
RAPGEF4-206ENST00000464976 PLPPR3Q6T4P5 718 aa17.93■□□□□ 0.46
RAPGEF4-206ENST00000464976 POTEDQ86YR6 584 aa17.34■□□□□ 0.37
RAPGEF4-206ENST00000464976 PPP6R1Q9UPN7 881 aa17.24■□□□□ 0.35
RAPGEF4-206ENST00000464976 ADRA2BP18089 450 aa17.16■□□□□ 0.34
RAPGEF4-206ENST00000464976 PIAS4Q8N2W9 510 aaPredicted RBP17.08■□□□□ 0.32
RAPGEF4-206ENST00000464976 MSH5O43196 834 aa17.01■□□□□ 0.31
RAPGEF4-206ENST00000464976 KCNA4P22459 653 aa15.86■□□□□ 0.13
RAPGEF4-206ENST00000464976 PPP4R3CPQ6ZMV5 832 aa15.85■□□□□ 0.13
RAPGEF4-206ENST00000464976 MAPK8IP2Q13387 824 aaPredicted RBP15.76■□□□□ 0.11
RAPGEF4-206ENST00000464976 DMRT2Q9Y5R5 561 aa15.58■□□□□ 0.08
RAPGEF4-206ENST00000464976 SCAF1Q9H7N4 1312 aaKnown RBP15.57■□□□□ 0.08
RAPGEF4-206ENST00000464976 NCBP3Q53F19 620 aaKnown RBP15.55■□□□□ 0.08
RAPGEF4-206ENST00000464976 CNKSR2Q8WXI2 1034 aa15.32■□□□□ 0.04
RAPGEF4-206ENST00000464976 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
RAPGEF4-206ENST00000464976 SLC4A1APQ9BWU0 796 aaKnown RBP15.19■□□□□ 0.02
RAPGEF4-206ENST00000464976 EHMT2Q96KQ7 1210 aa15.18■□□□□ 0.02
RAPGEF4-206ENST00000464976 HOXD11P31277 338 aaPredicted RBP15.05■□□□□ -0
RAPGEF4-206ENST00000464976 RNF216Q9NWF9 866 aaPredicted RBP14.93□□□□□ -0.02
RAPGEF4-206ENST00000464976 DCAF8L1A6NGE4 600 aa14.88□□□□□ -0.03
RAPGEF4-206ENST00000464976 CSRNP3Q8WYN3 585 aa14.76□□□□□ -0.05
RAPGEF4-206ENST00000464976 DNAJC5BQ9UF47 199 aa14.69□□□□□ -0.06
RAPGEF4-206ENST00000464976 RNF39Q9H2S5 420 aa14.58□□□□□ -0.08
RAPGEF4-206ENST00000464976 ZBTB22O15209 634 aa14.57□□□□□ -0.08
RAPGEF4-206ENST00000464976 CACNB1Q02641 598 aaPredicted RBP14.56□□□□□ -0.08
RAPGEF4-206ENST00000464976 FOXD4L1Q9NU39 408 aa14.49□□□□□ -0.09
RAPGEF4-206ENST00000464976 SLC4A2P04920 1241 aa14.34□□□□□ -0.11
RAPGEF4-206ENST00000464976 C1QBPQ07021 282 aaKnown RBP14.33□□□□□ -0.12
RAPGEF4-206ENST00000464976 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.28□□□□□ -0.12
RAPGEF4-206ENST00000464976 MYCNP04198 464 aaPredicted RBP14.13□□□□□ -0.15
RAPGEF4-206ENST00000464976 U3KPZ7 1027 aaPredicted RBP14.06□□□□□ -0.16
RAPGEF4-206ENST00000464976 ATXN8OSP0DMR3 200 aa13.93□□□□□ -0.18
RAPGEF4-206ENST00000464976 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.86□□□□□ -0.19
RAPGEF4-206ENST00000464976 HNRNPUL2Q1KMD3 747 aaKnown RBP13.86□□□□□ -0.19
RAPGEF4-206ENST00000464976 SPINK5Q9NQ38 1064 aaPredicted RBP13.84□□□□□ -0.19
RAPGEF4-206ENST00000464976 SAMD1Q6SPF0 538 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF4-206ENST00000464976 CAPN15O75808 1086 aa13.74□□□□□ -0.21
RAPGEF4-206ENST00000464976 ATF5Q9Y2D1 282 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF4-206ENST00000464976 DSG3P32926 999 aa13.7□□□□□ -0.22
RAPGEF4-206ENST00000464976 APLP2Q06481 763 aa13.65□□□□□ -0.22
RAPGEF4-206ENST00000464976 TRHP20396 242 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF4-206ENST00000464976 ZNF219Q9P2Y4 722 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF4-206ENST00000464976 ABCB7O75027 752 aa13.47□□□□□ -0.25
RAPGEF4-206ENST00000464976 POTEHQ6S545 545 aa13.4□□□□□ -0.26
RAPGEF4-206ENST00000464976 FKBP8Q14318 412 aa13.38□□□□□ -0.27
RAPGEF4-206ENST00000464976 POLA2Q14181 598 aa13.27□□□□□ -0.29
RAPGEF4-206ENST00000464976 FBLN2P98095 1184 aa13.17□□□□□ -0.3
RAPGEF4-206ENST00000464976 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
RAPGEF4-206ENST00000464976 ZBTB12Q9Y330 459 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF4-206ENST00000464976 SPDYE4A6NLX3 237 aa13.04□□□□□ -0.32
RAPGEF4-206ENST00000464976 RBM42Q9BTD8 480 aaKnown RBP12.97□□□□□ -0.33
RAPGEF4-206ENST00000464976 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
RAPGEF4-206ENST00000464976 FBXO3Q9UK99 471 aa12.8□□□□□ -0.36
RAPGEF4-206ENST00000464976 PROM2Q8N271 834 aa12.78□□□□□ -0.36
RAPGEF4-206ENST00000464976 ZNF692Q9BU19 519 aaPredicted RBP12.76□□□□□ -0.37
RAPGEF4-206ENST00000464976 AMER1Q5JTC6 1135 aaPredicted RBP12.75□□□□□ -0.37
RAPGEF4-206ENST00000464976 AKT1S1Q96B36 256 aa12.74□□□□□ -0.37
RAPGEF4-206ENST00000464976 RTN4Q9NQC3 1192 aaKnown RBP12.74□□□□□ -0.37
RAPGEF4-206ENST00000464976 SPDYE2BA6NHP3 402 aa12.71□□□□□ -0.37
RAPGEF4-206ENST00000464976 SPDYE6P0CI01 402 aa12.71□□□□□ -0.37
RAPGEF4-206ENST00000464976 SPDYE2Q495Y8 402 aa12.71□□□□□ -0.37
RAPGEF4-206ENST00000464976 CHRDL2Q6WN34 429 aa12.71□□□□□ -0.37
RAPGEF4-206ENST00000464976 REM2Q8IYK8 340 aaPredicted RBP12.65□□□□□ -0.38
RAPGEF4-206ENST00000464976 SSUH2Q9Y2M2 353 aa12.62□□□□□ -0.39
RAPGEF4-206ENST00000464976 VASPP50552 380 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF4-206ENST00000464976 PABPN1Q86U42 306 aaKnown RBP eCLIP12.6□□□□□ -0.39
RAPGEF4-206ENST00000464976 PITPNM1O00562 1244 aa12.52□□□□□ -0.41
RAPGEF4-206ENST00000464976 STAG3Q9UJ98 1225 aa12.47□□□□□ -0.41
RAPGEF4-206ENST00000464976 IFNLR1Q8IU57 520 aaPredicted RBP12.45□□□□□ -0.42
RAPGEF4-206ENST00000464976 PIP4P2Q8N4L2 257 aa12.45□□□□□ -0.42
RAPGEF4-206ENST00000464976 FXR2P51116 673 aaKnown RBP eCLIP12.4□□□□□ -0.42
RAPGEF4-206ENST00000464976 PLCD3Q8N3E9 789 aa12.4□□□□□ -0.42
RAPGEF4-206ENST00000464976 KLHL34Q8N239 644 aa12.39□□□□□ -0.43
RAPGEF4-206ENST00000464976 MIER1Q8N108 512 aa12.37□□□□□ -0.43
RAPGEF4-206ENST00000464976 PLEKHG5O94827 1062 aa12.29□□□□□ -0.44
RAPGEF4-206ENST00000464976 SPDYE1Q8NFV5 336 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF4-206ENST00000464976 CLEC11AQ9Y240 323 aa12.28□□□□□ -0.44
RAPGEF4-206ENST00000464976 SPOCK2Q92563 424 aa12.27□□□□□ -0.45
RAPGEF4-206ENST00000464976 SP7Q8TDD2 431 aaPredicted RBP12.21□□□□□ -0.45
RAPGEF4-206ENST00000464976 ZBTB47Q9UFB7 747 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF4-206ENST00000464976 PRR29P0C7W0 189 aa12.17□□□□□ -0.46
RAPGEF4-206ENST00000464976 PRKAR2AP13861 404 aaKnown RBP12.17□□□□□ -0.46
RAPGEF4-206ENST00000464976 HAX1O00165 279 aa12.16□□□□□ -0.46
RAPGEF4-206ENST00000464976 PKD2Q13563 968 aa12.15□□□□□ -0.46
RAPGEF4-206ENST00000464976 DCAF8L2P0C7V8 631 aa12.14□□□□□ -0.47
RAPGEF4-206ENST00000464976 EVX2Q03828 476 aa12.13□□□□□ -0.47
RAPGEF4-206ENST00000464976 CHADLQ6NUI6 762 aa12.09□□□□□ -0.47
RAPGEF4-206ENST00000464976 CIZ1Q9ULV3 898 aaPredicted RBP12.08□□□□□ -0.48
RAPGEF4-206ENST00000464976 ECM2O94769 699 aaPredicted RBP12.07□□□□□ -0.48
RAPGEF4-206ENST00000464976 SLC24A1O60721 1099 aa12.06□□□□□ -0.48
RAPGEF4-206ENST00000464976 CREBZFQ9NS37 354 aa12.05□□□□□ -0.48
RAPGEF4-206ENST00000464976 C19orf67A6NJJ6 358 aa12□□□□□ -0.49
RAPGEF4-206ENST00000464976 NUBP1P53384 320 aa11.94□□□□□ -0.5
RAPGEF4-206ENST00000464976 DCAF8Q5TAQ9 597 aa11.94□□□□□ -0.5
RAPGEF4-206ENST00000464976 GSE1Q14687 1217 aa11.93□□□□□ -0.5
RAPGEF4-206ENST00000464976 MNX1P50219 401 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms