RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 ARHGEF25Q86VW2 580 aa16.55■□□□□ 0.24
RPUSD3-211ENST00000464783 WASHC2AQ641Q2 1341 aa16.54■□□□□ 0.24
RPUSD3-211ENST00000464783 ABCC6O95255 1503 aa16.54■□□□□ 0.24
RPUSD3-211ENST00000464783 COL5A2P05997 1499 aaPredicted RBP16.54■□□□□ 0.24
RPUSD3-211ENST00000464783 RGS12O14924 1447 aa16.53■□□□□ 0.24
RPUSD3-211ENST00000464783 A0A0G2JS52 829 aa16.51■□□□□ 0.23
RPUSD3-211ENST00000464783 MYT1Q01538 1121 aa16.51■□□□□ 0.23
RPUSD3-211ENST00000464783 KNSTRNQ9Y448 316 aa16.51■□□□□ 0.23
RPUSD3-211ENST00000464783 SPATA31A5Q5VU36 1347 aa16.5■□□□□ 0.23
RPUSD3-211ENST00000464783 SPATA31A7Q8IWB4 1347 aa16.5■□□□□ 0.23
RPUSD3-211ENST00000464783 MAP2P11137 1827 aaKnown RBP16.5■□□□□ 0.23
RPUSD3-211ENST00000464783 BRWD3Q6RI45 1802 aa16.5■□□□□ 0.23
RPUSD3-211ENST00000464783 CSB-PGBD3P0DP91 1061 aa16.5■□□□□ 0.23
RPUSD3-211ENST00000464783 LARP1Q6PKG0 1096 aaKnown RBP16.5■□□□□ 0.23
RPUSD3-211ENST00000464783 USP35Q9P2H5 1018 aa16.5■□□□□ 0.23
RPUSD3-211ENST00000464783 AXIN2Q9Y2T1 843 aa16.49■□□□□ 0.23
RPUSD3-211ENST00000464783 NSD2O96028 1365 aa16.49■□□□□ 0.23
RPUSD3-211ENST00000464783 CRB1P82279 1406 aa16.48■□□□□ 0.23
RPUSD3-211ENST00000464783 FBLN1P23142 703 aa16.48■□□□□ 0.23
RPUSD3-211ENST00000464783 AMPHP49418 695 aa16.48■□□□□ 0.23
RPUSD3-211ENST00000464783 FAM98CQ17RN3 349 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-211ENST00000464783 TOM1L2Q6ZVM7 507 aa16.48■□□□□ 0.23
RPUSD3-211ENST00000464783 MAP3K19Q56UN5 1328 aa16.47■□□□□ 0.23
RPUSD3-211ENST00000464783 SPATA31A1Q5TZJ5 1347 aa16.47■□□□□ 0.23
RPUSD3-211ENST00000464783 WNK3Q9BYP7 1800 aa16.47■□□□□ 0.23
RPUSD3-211ENST00000464783 FAM208AQ9UK61 1670 aaKnown RBP16.47■□□□□ 0.23
RPUSD3-211ENST00000464783 BLMP54132 1417 aaPredicted RBP16.47■□□□□ 0.23
RPUSD3-211ENST00000464783 RRS1Q15050 365 aaKnown RBP16.47■□□□□ 0.23
RPUSD3-211ENST00000464783 WDR17Q8IZU2 1322 aa16.46■□□□□ 0.23
RPUSD3-211ENST00000464783 SOCS7O14512 581 aa16.46■□□□□ 0.23
RPUSD3-211ENST00000464783 TNNT2P45379 298 aaPredicted RBP16.45■□□□□ 0.22
RPUSD3-211ENST00000464783 SEPT12Q8IYM1 358 aa16.45■□□□□ 0.22
RPUSD3-211ENST00000464783 IP6K1Q92551 441 aa16.45■□□□□ 0.22
RPUSD3-211ENST00000464783 RTL1A6NKG5 1358 aa16.45■□□□□ 0.22
RPUSD3-211ENST00000464783 THSD7AQ9UPZ6 1657 aa16.45■□□□□ 0.22
RPUSD3-211ENST00000464783 PEAK1Q9H792 1746 aa16.45■□□□□ 0.22
RPUSD3-211ENST00000464783 MORC1Q86VD1 984 aa16.44■□□□□ 0.22
RPUSD3-211ENST00000464783 TCP11L2Q8N4U5 519 aa16.44■□□□□ 0.22
RPUSD3-211ENST00000464783 ANKRD24Q8TF21 1146 aa16.44■□□□□ 0.22
RPUSD3-211ENST00000464783 LTV1Q96GA3 475 aaPredicted RBP16.44■□□□□ 0.22
RPUSD3-211ENST00000464783 ERBB3P21860 1342 aa16.44■□□□□ 0.22
RPUSD3-211ENST00000464783 PPM1GO15355 546 aaPredicted RBP16.43■□□□□ 0.22
RPUSD3-211ENST00000464783 HOXC9P31274 260 aa16.43■□□□□ 0.22
RPUSD3-211ENST00000464783 THRAP3Q9Y2W1 955 aaKnown RBP16.43■□□□□ 0.22
RPUSD3-211ENST00000464783 RGPD2P0DJD1 1756 aa16.43■□□□□ 0.22
RPUSD3-211ENST00000464783 FLT4P35916 1363 aa16.42■□□□□ 0.22
RPUSD3-211ENST00000464783 ONECUT3O60422 494 aaPredicted RBP16.42■□□□□ 0.22
RPUSD3-211ENST00000464783 CNGB1Q14028 1251 aaPredicted RBP16.42■□□□□ 0.22
RPUSD3-211ENST00000464783 NLRP2Q9NX02 1062 aa16.42■□□□□ 0.22
RPUSD3-211ENST00000464783 SMG6Q86US8 1419 aaKnown RBP16.42■□□□□ 0.22
RPUSD3-211ENST00000464783 PARP4Q9UKK3 1724 aaKnown RBP16.42■□□□□ 0.22
RPUSD3-211ENST00000464783 AMER1Q5JTC6 1135 aaPredicted RBP16.41■□□□□ 0.22
RPUSD3-211ENST00000464783 BARGINQ6ZT62 677 aa16.41■□□□□ 0.22
RPUSD3-211ENST00000464783 EMILIN1Q9Y6C2 1016 aa16.41■□□□□ 0.22
RPUSD3-211ENST00000464783 KIF24Q5T7B8 1368 aa16.4■□□□□ 0.22
RPUSD3-211ENST00000464783 PER1O15534 1290 aaPredicted RBP16.4■□□□□ 0.22
RPUSD3-211ENST00000464783 CC2D1BQ5T0F9 858 aaKnown RBP16.4■□□□□ 0.22
RPUSD3-211ENST00000464783 CARD10Q9BWT7 1032 aa16.4■□□□□ 0.22
RPUSD3-211ENST00000464783 KRT27Q7Z3Y8 459 aa16.39■□□□□ 0.21
RPUSD3-211ENST00000464783 INSRP06213 1382 aa16.38■□□□□ 0.21
RPUSD3-211ENST00000464783 LRRC37A3O60309 1634 aa16.38■□□□□ 0.21
RPUSD3-211ENST00000464783 HSP90AB2PQ58FF8 381 aa16.38■□□□□ 0.21
RPUSD3-211ENST00000464783 POLKQ9UBT6 870 aa16.37■□□□□ 0.21
RPUSD3-211ENST00000464783 PDE3BQ13370 1112 aa16.36■□□□□ 0.21
RPUSD3-211ENST00000464783 CDCA7Q9BWT1 371 aaPredicted RBP16.36■□□□□ 0.21
RPUSD3-211ENST00000464783 NPC1L1Q9UHC9 1359 aa16.35■□□□□ 0.21
RPUSD3-211ENST00000464783 DDB1Q16531 1140 aa16.34■□□□□ 0.21
RPUSD3-211ENST00000464783 IL2RBP14784 551 aa16.33■□□□□ 0.2
RPUSD3-211ENST00000464783 DISP2A7MBM2 1401 aa16.32■□□□□ 0.2
RPUSD3-211ENST00000464783 DDX10Q13206 875 aaKnown RBP16.32■□□□□ 0.2
RPUSD3-211ENST00000464783 FAM182BQ5T319 152 aa16.32■□□□□ 0.2
RPUSD3-211ENST00000464783 UPF1Q92900 1129 aaKnown RBP eCLIP16.32■□□□□ 0.2
RPUSD3-211ENST00000464783 EP400Q96L91 3159 aa16.32■□□□□ 0.2
RPUSD3-211ENST00000464783 USHBP1Q8N6Y0 703 aa16.31■□□□□ 0.2
RPUSD3-211ENST00000464783 RGPD1P0DJD0 1748 aa16.31■□□□□ 0.2
RPUSD3-211ENST00000464783 EXOC5O00471 708 aa16.3■□□□□ 0.2
RPUSD3-211ENST00000464783 NBPF6Q5VWK0 638 aa16.3■□□□□ 0.2
RPUSD3-211ENST00000464783 NBPF4Q96M43 638 aa16.3■□□□□ 0.2
RPUSD3-211ENST00000464783 TNS2Q63HR2 1409 aa16.29■□□□□ 0.2
RPUSD3-211ENST00000464783 MTHFSP49914 203 aa16.28■□□□□ 0.2
RPUSD3-211ENST00000464783 EIF4A2Q14240 407 aaKnown RBP16.28■□□□□ 0.2
RPUSD3-211ENST00000464783 RAPGEF4Q8WZA2 1011 aa16.28■□□□□ 0.2
RPUSD3-211ENST00000464783 OVOS2A0A0G2JMS6 1433 aa16.28■□□□□ 0.2
RPUSD3-211ENST00000464783 SF3B2Q13435 895 aaKnown RBP16.27■□□□□ 0.2
RPUSD3-211ENST00000464783 FAM196AQ6ZSG2 479 aa16.27■□□□□ 0.2
RPUSD3-211ENST00000464783 SBF2Q86WG5 1849 aa16.26■□□□□ 0.19
RPUSD3-211ENST00000464783 MEGF6O75095 1541 aa16.26■□□□□ 0.19
RPUSD3-211ENST00000464783 ZNF316A6NFI3 1004 aaPredicted RBP16.26■□□□□ 0.19
RPUSD3-211ENST00000464783 TATP17735 454 aaPredicted RBP16.26■□□□□ 0.19
RPUSD3-211ENST00000464783 CCDC125Q86Z20 511 aa16.26■□□□□ 0.19
RPUSD3-211ENST00000464783 SHANK3Q9BYB0 1731 aa16.25■□□□□ 0.19
RPUSD3-211ENST00000464783 EYA1Q99502 592 aa16.25■□□□□ 0.19
RPUSD3-211ENST00000464783 KAT6BQ8WYB5 2073 aa16.25■□□□□ 0.19
RPUSD3-211ENST00000464783 TNS1Q9HBL0 1735 aaKnown RBP16.25■□□□□ 0.19
RPUSD3-211ENST00000464783 MARCH10Q8NA82 808 aaPredicted RBP16.24■□□□□ 0.19
RPUSD3-211ENST00000464783 PKD1L3Q7Z443 1732 aa16.22■□□□□ 0.19
RPUSD3-211ENST00000464783 NCAPD2Q15021 1401 aa16.22■□□□□ 0.19
RPUSD3-211ENST00000464783 TRIM37O94972 964 aa16.22■□□□□ 0.19
RPUSD3-211ENST00000464783 ZCRB1Q8TBF4 217 aaKnown RBP16.22■□□□□ 0.19
RPUSD3-211ENST00000464783 DDX54Q8TDD1 881 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms