RNA–Protein interactions for RNA: ENST00000464586.1

PLD3-208, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-208ENST00000464586 NSD2O96028 1365 aa11.32□□□□□ -0.6
PLD3-208ENST00000464586 GJD4Q96KN9 370 aaPredicted RBP11.32□□□□□ -0.6
PLD3-208ENST00000464586 GLI3P10071 1580 aa11.32□□□□□ -0.6
PLD3-208ENST00000464586 CDK12Q9NYV4 1490 aaPredicted RBP11.32□□□□□ -0.6
PLD3-208ENST00000464586 FAM208AQ9UK61 1670 aaKnown RBP11.31□□□□□ -0.6
PLD3-208ENST00000464586 STRN4Q9NRL3 753 aa11.31□□□□□ -0.6
PLD3-208ENST00000464586 BRWD3Q6RI45 1802 aa11.3□□□□□ -0.6
PLD3-208ENST00000464586 ILDR2Q71H61 639 aa11.3□□□□□ -0.6
PLD3-208ENST00000464586 COL5A2P05997 1499 aaPredicted RBP11.3□□□□□ -0.6
PLD3-208ENST00000464586 WNK3Q9BYP7 1800 aa11.3□□□□□ -0.6
PLD3-208ENST00000464586 SPATA31A5Q5VU36 1347 aa11.29□□□□□ -0.6
PLD3-208ENST00000464586 SPATA31A7Q8IWB4 1347 aa11.29□□□□□ -0.6
PLD3-208ENST00000464586 RGPD2P0DJD1 1756 aa11.28□□□□□ -0.6
PLD3-208ENST00000464586 BLMP54132 1417 aaPredicted RBP11.28□□□□□ -0.6
PLD3-208ENST00000464586 SOCS7O14512 581 aa11.28□□□□□ -0.6
PLD3-208ENST00000464586 PER1O15534 1290 aaPredicted RBP11.28□□□□□ -0.6
PLD3-208ENST00000464586 AMPHP49418 695 aa11.28□□□□□ -0.6
PLD3-208ENST00000464586 MORC1Q86VD1 984 aa11.28□□□□□ -0.6
PLD3-208ENST00000464586 IP6K1Q92551 441 aa11.28□□□□□ -0.6
PLD3-208ENST00000464586 AXIN2Q9Y2T1 843 aa11.28□□□□□ -0.6
PLD3-208ENST00000464586 MAP3K19Q56UN5 1328 aa11.28□□□□□ -0.6
PLD3-208ENST00000464586 RTL1A6NKG5 1358 aa11.28□□□□□ -0.6
PLD3-208ENST00000464586 KIF24Q5T7B8 1368 aa11.28□□□□□ -0.6
PLD3-208ENST00000464586 CRB1P82279 1406 aa11.27□□□□□ -0.6
PLD3-208ENST00000464586 PEAK1Q9H792 1746 aa11.27□□□□□ -0.61
PLD3-208ENST00000464586 CSB-PGBD3P0DP91 1061 aa11.27□□□□□ -0.61
PLD3-208ENST00000464586 AMER1Q5JTC6 1135 aaPredicted RBP11.27□□□□□ -0.61
PLD3-208ENST00000464586 SPATA31A1Q5TZJ5 1347 aa11.27□□□□□ -0.61
PLD3-208ENST00000464586 WDR17Q8IZU2 1322 aa11.27□□□□□ -0.61
PLD3-208ENST00000464586 FBLN1P23142 703 aa11.26□□□□□ -0.61
PLD3-208ENST00000464586 HOXC9P31274 260 aa11.26□□□□□ -0.61
PLD3-208ENST00000464586 RRS1Q15050 365 aaKnown RBP11.26□□□□□ -0.61
PLD3-208ENST00000464586 LARP1Q6PKG0 1096 aaKnown RBP11.26□□□□□ -0.61
PLD3-208ENST00000464586 TOM1L2Q6ZVM7 507 aa11.26□□□□□ -0.61
PLD3-208ENST00000464586 THRAP3Q9Y2W1 955 aaKnown RBP11.26□□□□□ -0.61
PLD3-208ENST00000464586 NPC1L1Q9UHC9 1359 aa11.26□□□□□ -0.61
PLD3-208ENST00000464586 RGS12O14924 1447 aa11.26□□□□□ -0.61
PLD3-208ENST00000464586 ONECUT3O60422 494 aaPredicted RBP11.25□□□□□ -0.61
PLD3-208ENST00000464586 ANKRD24Q8TF21 1146 aa11.25□□□□□ -0.61
PLD3-208ENST00000464586 PARP4Q9UKK3 1724 aaKnown RBP11.25□□□□□ -0.61
PLD3-208ENST00000464586 FLT4P35916 1363 aa11.25□□□□□ -0.61
PLD3-208ENST00000464586 THSD7AQ9UPZ6 1657 aa11.24□□□□□ -0.61
PLD3-208ENST00000464586 A0A0G2JS52 829 aa11.24□□□□□ -0.61
PLD3-208ENST00000464586 TNNT2P45379 298 aaPredicted RBP11.24□□□□□ -0.61
PLD3-208ENST00000464586 MYT1Q01538 1121 aa11.24□□□□□ -0.61
PLD3-208ENST00000464586 FAM98CQ17RN3 349 aaKnown RBP11.24□□□□□ -0.61
PLD3-208ENST00000464586 CC2D1BQ5T0F9 858 aaKnown RBP11.24□□□□□ -0.61
PLD3-208ENST00000464586 TCP11L2Q8N4U5 519 aa11.24□□□□□ -0.61
PLD3-208ENST00000464586 CARD10Q9BWT7 1032 aa11.24□□□□□ -0.61
PLD3-208ENST00000464586 USP35Q9P2H5 1018 aa11.24□□□□□ -0.61
PLD3-208ENST00000464586 ERBB3P21860 1342 aa11.24□□□□□ -0.61
PLD3-208ENST00000464586 PPM1GO15355 546 aaPredicted RBP11.23□□□□□ -0.61
PLD3-208ENST00000464586 BARGINQ6ZT62 677 aa11.23□□□□□ -0.61
PLD3-208ENST00000464586 SEPT12Q8IYM1 358 aa11.23□□□□□ -0.61
PLD3-208ENST00000464586 LTV1Q96GA3 475 aaPredicted RBP11.23□□□□□ -0.61
PLD3-208ENST00000464586 POLKQ9UBT6 870 aa11.23□□□□□ -0.61
PLD3-208ENST00000464586 EMILIN1Q9Y6C2 1016 aa11.23□□□□□ -0.61
PLD3-208ENST00000464586 INSRP06213 1382 aa11.23□□□□□ -0.61
PLD3-208ENST00000464586 SMG6Q86US8 1419 aaKnown RBP11.23□□□□□ -0.61
PLD3-208ENST00000464586 KAT6BQ8WYB5 2073 aa11.23□□□□□ -0.61
PLD3-208ENST00000464586 ZNF316A6NFI3 1004 aaPredicted RBP11.22□□□□□ -0.61
PLD3-208ENST00000464586 DDX10Q13206 875 aaKnown RBP11.22□□□□□ -0.61
PLD3-208ENST00000464586 NLRP2Q9NX02 1062 aa11.22□□□□□ -0.61
PLD3-208ENST00000464586 CNGB1Q14028 1251 aaPredicted RBP11.21□□□□□ -0.61
PLD3-208ENST00000464586 CDCA7Q9BWT1 371 aaPredicted RBP11.21□□□□□ -0.61
PLD3-208ENST00000464586 HSP90AB2PQ58FF8 381 aa11.2□□□□□ -0.62
PLD3-208ENST00000464586 LRRC37A3O60309 1634 aa11.2□□□□□ -0.62
PLD3-208ENST00000464586 KRT27Q7Z3Y8 459 aa11.19□□□□□ -0.62
PLD3-208ENST00000464586 PDE3BQ13370 1112 aa11.18□□□□□ -0.62
PLD3-208ENST00000464586 SBF2Q86WG5 1849 aa11.18□□□□□ -0.62
PLD3-208ENST00000464586 DISP2A7MBM2 1401 aa11.18□□□□□ -0.62
PLD3-208ENST00000464586 IL2RBP14784 551 aa11.17□□□□□ -0.62
PLD3-208ENST00000464586 MTHFSP49914 203 aa11.17□□□□□ -0.62
PLD3-208ENST00000464586 DDB1Q16531 1140 aa11.17□□□□□ -0.62
PLD3-208ENST00000464586 NBPF6Q5VWK0 638 aa11.17□□□□□ -0.62
PLD3-208ENST00000464586 NBPF4Q96M43 638 aa11.17□□□□□ -0.62
PLD3-208ENST00000464586 RGPD1P0DJD0 1748 aa11.16□□□□□ -0.62
PLD3-208ENST00000464586 EXOC5O00471 708 aa11.16□□□□□ -0.62
PLD3-208ENST00000464586 EIF4A2Q14240 407 aaKnown RBP11.16□□□□□ -0.62
PLD3-208ENST00000464586 SHANK3Q9BYB0 1731 aa11.15□□□□□ -0.63
PLD3-208ENST00000464586 TATP17735 454 aaPredicted RBP11.14□□□□□ -0.63
PLD3-208ENST00000464586 USHBP1Q8N6Y0 703 aa11.14□□□□□ -0.63
PLD3-208ENST00000464586 RAPGEF4Q8WZA2 1011 aa11.14□□□□□ -0.63
PLD3-208ENST00000464586 CFAP53Q96M91 514 aa11.14□□□□□ -0.63
PLD3-208ENST00000464586 EYA1Q99502 592 aa11.14□□□□□ -0.63
PLD3-208ENST00000464586 TNS2Q63HR2 1409 aa11.14□□□□□ -0.63
PLD3-208ENST00000464586 PARD3Q8TEW0 1356 aa11.14□□□□□ -0.63
PLD3-208ENST00000464586 PKD1L3Q7Z443 1732 aa11.13□□□□□ -0.63
PLD3-208ENST00000464586 NCAPD2Q15021 1401 aa11.13□□□□□ -0.63
PLD3-208ENST00000464586 PPP2R1AP30153 589 aa11.13□□□□□ -0.63
PLD3-208ENST00000464586 RALBP1Q15311 655 aa11.13□□□□□ -0.63
PLD3-208ENST00000464586 FAM196AQ6ZSG2 479 aa11.13□□□□□ -0.63
PLD3-208ENST00000464586 VIRMAQ69YN4 1812 aaKnown RBP11.12□□□□□ -0.63
PLD3-208ENST00000464586 OVOS2A0A0G2JMS6 1433 aa11.12□□□□□ -0.63
PLD3-208ENST00000464586 DIAPH1O60610 1272 aaKnown RBP11.12□□□□□ -0.63
PLD3-208ENST00000464586 CCDC125Q86Z20 511 aa11.12□□□□□ -0.63
PLD3-208ENST00000464586 UPF1Q92900 1129 aaKnown RBP eCLIP11.12□□□□□ -0.63
PLD3-208ENST00000464586 IGSF1Q8N6C5 1336 aa11.11□□□□□ -0.63
PLD3-208ENST00000464586 MEGF6O75095 1541 aa11.11□□□□□ -0.63
PLD3-208ENST00000464586 IL13P35225 146 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms