RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 NLGN2Q8NFZ4 835 aa18.72■□□□□ 0.59
SNX17-205ENST00000464279 YBX3P16989 372 aaKnown RBP eCLIP18.71■□□□□ 0.59
SNX17-205ENST00000464279 CFAP70Q5T0N1 1121 aa18.71■□□□□ 0.59
SNX17-205ENST00000464279 MINK1Q8N4C8 1332 aaPredicted RBP18.71■□□□□ 0.59
SNX17-205ENST00000464279 PAPPAQ13219 1627 aa18.71■□□□□ 0.58
SNX17-205ENST00000464279 TOPAZ1Q8N9V7 1692 aa18.7■□□□□ 0.58
SNX17-205ENST00000464279 WASLO00401 505 aaPredicted RBP18.7■□□□□ 0.58
SNX17-205ENST00000464279 APLP1P51693 650 aa18.7■□□□□ 0.58
SNX17-205ENST00000464279 PRELPP51888 382 aa18.7■□□□□ 0.58
SNX17-205ENST00000464279 COL13A1Q5TAT6 717 aaPredicted RBP18.69■□□□□ 0.58
SNX17-205ENST00000464279 ZNF526Q8TF50 670 aaPredicted RBP18.69■□□□□ 0.58
SNX17-205ENST00000464279 USP19O94966 1318 aa18.69■□□□□ 0.58
SNX17-205ENST00000464279 ADCY9O60503 1353 aa18.68■□□□□ 0.58
SNX17-205ENST00000464279 SLC16A10Q8TF71 515 aa18.68■□□□□ 0.58
SNX17-205ENST00000464279 AKAP12Q02952 1782 aa18.67■□□□□ 0.58
SNX17-205ENST00000464279 SLC34A2O95436 690 aa18.66■□□□□ 0.58
SNX17-205ENST00000464279 ZNF827Q17R98 1081 aa18.66■□□□□ 0.58
SNX17-205ENST00000464279 CDCA7Q9BWT1 371 aaPredicted RBP18.66■□□□□ 0.58
SNX17-205ENST00000464279 ITSN1Q15811 1721 aa18.66■□□□□ 0.58
SNX17-205ENST00000464279 TOM1L2Q6ZVM7 507 aa18.65■□□□□ 0.58
SNX17-205ENST00000464279 TNS4Q8IZW8 715 aa18.65■□□□□ 0.58
SNX17-205ENST00000464279 PPARGC1BQ86YN6 1023 aaKnown RBP18.64■□□□□ 0.57
SNX17-205ENST00000464279 DNAJC5GQ8N7S2 189 aa18.64■□□□□ 0.57
SNX17-205ENST00000464279 ABTB2Q8N961 1025 aa18.64■□□□□ 0.57
SNX17-205ENST00000464279 GCP02774 474 aa18.63■□□□□ 0.57
SNX17-205ENST00000464279 WNK3Q9BYP7 1800 aa18.63■□□□□ 0.57
SNX17-205ENST00000464279 COL24A1Q17RW2 1714 aa18.61■□□□□ 0.57
SNX17-205ENST00000464279 POLR3AO14802 1390 aaPredicted RBP18.61■□□□□ 0.57
SNX17-205ENST00000464279 NUDT16Q96DE0 195 aaKnown RBP18.61■□□□□ 0.57
SNX17-205ENST00000464279 TRAK1Q9UPV9 953 aa18.61■□□□□ 0.57
SNX17-205ENST00000464279 ZBTB7CA1YPR0 619 aa18.6■□□□□ 0.57
SNX17-205ENST00000464279 KIF3CO14782 793 aa18.6■□□□□ 0.57
SNX17-205ENST00000464279 NHSQ6T4R5 1651 aa18.6■□□□□ 0.57
SNX17-205ENST00000464279 ADGRB1O14514 1584 aa18.59■□□□□ 0.57
SNX17-205ENST00000464279 NLRP13Q86W25 1043 aa18.59■□□□□ 0.57
SNX17-205ENST00000464279 BRD4O60885 1362 aaPredicted RBP18.58■□□□□ 0.57
SNX17-205ENST00000464279 ACEP12821 1306 aa18.58■□□□□ 0.57
SNX17-205ENST00000464279 WDR17Q8IZU2 1322 aa18.57■□□□□ 0.56
SNX17-205ENST00000464279 PNPLA7Q6ZV29 1317 aa18.56■□□□□ 0.56
SNX17-205ENST00000464279 EXOC5O00471 708 aa18.56■□□□□ 0.56
SNX17-205ENST00000464279 AKT1S1Q96B36 256 aa18.56■□□□□ 0.56
SNX17-205ENST00000464279 QSER1Q2KHR3 1735 aa18.56■□□□□ 0.56
SNX17-205ENST00000464279 ACSBG1Q96GR2 724 aa18.55■□□□□ 0.56
SNX17-205ENST00000464279 LRRC4BQ9NT99 713 aa18.55■□□□□ 0.56
SNX17-205ENST00000464279 TNS2Q63HR2 1409 aa18.55■□□□□ 0.56
SNX17-205ENST00000464279 USP6P35125 1406 aa18.52■□□□□ 0.56
SNX17-205ENST00000464279 JMYQ8N9B5 988 aa18.52■□□□□ 0.56
SNX17-205ENST00000464279 KLRG1Q96E93 195 aa18.51■□□□□ 0.55
SNX17-205ENST00000464279 CARD10Q9BWT7 1032 aa18.51■□□□□ 0.55
SNX17-205ENST00000464279 TFCP2L1Q9NZI6 479 aa18.51■□□□□ 0.55
SNX17-205ENST00000464279 PLEKHG3A1L390 1219 aa18.5■□□□□ 0.55
SNX17-205ENST00000464279 TOMM70O94826 608 aa18.5■□□□□ 0.55
SNX17-205ENST00000464279 CCDC61Q9Y6R9 512 aa18.5■□□□□ 0.55
SNX17-205ENST00000464279 WDR90Q96KV7 1748 aa18.49■□□□□ 0.55
SNX17-205ENST00000464279 SLC27A3Q5K4L6 730 aa18.49■□□□□ 0.55
SNX17-205ENST00000464279 BTAF1O14981 1849 aa18.49■□□□□ 0.55
SNX17-205ENST00000464279 ARHGEF28Q8N1W1 1705 aaKnown RBP18.49■□□□□ 0.55
SNX17-205ENST00000464279 SLIT3O75094 1523 aa18.49■□□□□ 0.55
SNX17-205ENST00000464279 ABCC6O95255 1503 aa18.49■□□□□ 0.55
SNX17-205ENST00000464279 CSB-PGBD3P0DP91 1061 aa18.48■□□□□ 0.55
SNX17-205ENST00000464279 AXIN2Q9Y2T1 843 aa18.48■□□□□ 0.55
SNX17-205ENST00000464279 CDK19Q9BWU1 502 aa18.47■□□□□ 0.55
SNX17-205ENST00000464279 COL18A1P39060 1754 aa18.47■□□□□ 0.55
SNX17-205ENST00000464279 CCDC7Q96M83 1385 aa18.46■□□□□ 0.55
SNX17-205ENST00000464279 PCDH10Q9P2E7 1040 aa18.46■□□□□ 0.55
SNX17-205ENST00000464279 CD2APQ9Y5K6 639 aa18.46■□□□□ 0.55
SNX17-205ENST00000464279 CPSF1Q10570 1443 aaKnown RBP18.46■□□□□ 0.55
SNX17-205ENST00000464279 TRPM1Q7Z4N2 1603 aa18.45■□□□□ 0.54
SNX17-205ENST00000464279 TUBGCP6Q96RT7 1819 aa18.45■□□□□ 0.54
SNX17-205ENST00000464279 WWC3Q9ULE0 1092 aa18.45■□□□□ 0.54
SNX17-205ENST00000464279 PPIP5K1Q6PFW1 1433 aa18.45■□□□□ 0.54
SNX17-205ENST00000464279 NLRP6P59044 892 aa18.44■□□□□ 0.54
SNX17-205ENST00000464279 MSH5O43196 834 aa18.42■□□□□ 0.54
SNX17-205ENST00000464279 HTRA3P83110 453 aa18.42■□□□□ 0.54
SNX17-205ENST00000464279 MSL1Q68DK7 614 aa18.41■□□□□ 0.54
SNX17-205ENST00000464279 MPHOSPH9Q99550 1183 aa18.4■□□□□ 0.54
SNX17-205ENST00000464279 ARHGEF25Q86VW2 580 aa18.38■□□□□ 0.53
SNX17-205ENST00000464279 RBM46Q8TBY0 533 aaKnown RBP18.38■□□□□ 0.53
SNX17-205ENST00000464279 KCNQ4P56696 695 aa18.37■□□□□ 0.53
SNX17-205ENST00000464279 COL23A1Q86Y22 540 aaPredicted RBP18.37■□□□□ 0.53
SNX17-205ENST00000464279 IGSF1Q8N6C5 1336 aa18.37■□□□□ 0.53
SNX17-205ENST00000464279 CICQ96RK0 1608 aaPredicted RBP18.35■□□□□ 0.53
SNX17-205ENST00000464279 NMRK2Q9NPI5 230 aa18.35■□□□□ 0.53
SNX17-205ENST00000464279 HSPA1AP0DMV8 641 aaKnown RBP18.33■□□□□ 0.52
SNX17-205ENST00000464279 HSPA1BP0DMV9 641 aaKnown RBP18.33■□□□□ 0.52
SNX17-205ENST00000464279 IL2RBP14784 551 aa18.33■□□□□ 0.52
SNX17-205ENST00000464279 FSTL1Q12841 308 aa18.33■□□□□ 0.52
SNX17-205ENST00000464279 C16orf71Q8IYS4 520 aaPredicted RBP18.33■□□□□ 0.52
SNX17-205ENST00000464279 KCNH5Q8NCM2 988 aa18.33■□□□□ 0.52
SNX17-205ENST00000464279 PIK3C2AO00443 1686 aa18.33■□□□□ 0.52
SNX17-205ENST00000464279 RGPD5Q99666 1765 aa18.32■□□□□ 0.52
SNX17-205ENST00000464279 SOX12O15370 315 aa18.3■□□□□ 0.52
SNX17-205ENST00000464279 SRPK2P78362 688 aaKnown RBP18.3■□□□□ 0.52
SNX17-205ENST00000464279 CCNL1Q9UK58 526 aaPredicted RBP18.3■□□□□ 0.52
SNX17-205ENST00000464279 KAT6BQ8WYB5 2073 aa18.3■□□□□ 0.52
SNX17-205ENST00000464279 NLRP2Q9NX02 1062 aa18.29■□□□□ 0.52
SNX17-205ENST00000464279 KDM2AQ9Y2K7 1162 aa18.29■□□□□ 0.52
SNX17-205ENST00000464279 PCNTO95613 3336 aa18.28■□□□□ 0.52
SNX17-205ENST00000464279 SYTL4Q96C24 671 aaPredicted RBP18.28■□□□□ 0.52
SNX17-205ENST00000464279 LY75O60449 1722 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms