RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 FBLN1P23142 703 aa21.22■□□□□ 0.99
RAB11FIP3-208ENST00000464263 STRN4Q9NRL3 753 aa21.22■□□□□ 0.99
RAB11FIP3-208ENST00000464263 CCDC9Q9Y3X0 531 aaKnown RBP21.21■□□□□ 0.99
RAB11FIP3-208ENST00000464263 SPATA31A5Q5VU36 1347 aa21.21■□□□□ 0.99
RAB11FIP3-208ENST00000464263 SPATA31A7Q8IWB4 1347 aa21.21■□□□□ 0.99
RAB11FIP3-208ENST00000464263 ONECUT3O60422 494 aaPredicted RBP21.2■□□□□ 0.98
RAB11FIP3-208ENST00000464263 COL5A2P05997 1499 aaPredicted RBP21.2■□□□□ 0.98
RAB11FIP3-208ENST00000464263 ANKRD26Q9UPS8 1709 aa21.19■□□□□ 0.98
RAB11FIP3-208ENST00000464263 LARP1Q6PKG0 1096 aaKnown RBP21.19■□□□□ 0.98
RAB11FIP3-208ENST00000464263 RGS12O14924 1447 aa21.19■□□□□ 0.98
RAB11FIP3-208ENST00000464263 ABCC6O95255 1503 aa21.19■□□□□ 0.98
RAB11FIP3-208ENST00000464263 PER1O15534 1290 aaPredicted RBP21.18■□□□□ 0.98
RAB11FIP3-208ENST00000464263 SPATA31A1Q5TZJ5 1347 aa21.18■□□□□ 0.98
RAB11FIP3-208ENST00000464263 MAP3K19Q56UN5 1328 aa21.17■□□□□ 0.98
RAB11FIP3-208ENST00000464263 IP6K1Q92551 441 aa21.16■□□□□ 0.98
RAB11FIP3-208ENST00000464263 KNSTRNQ9Y448 316 aa21.16■□□□□ 0.98
RAB11FIP3-208ENST00000464263 MAP2P11137 1827 aaKnown RBP21.15■□□□□ 0.98
RAB11FIP3-208ENST00000464263 SOCS7O14512 581 aa21.15■□□□□ 0.98
RAB11FIP3-208ENST00000464263 BRWD3Q6RI45 1802 aa21.14■□□□□ 0.97
RAB11FIP3-208ENST00000464263 RRS1Q15050 365 aaKnown RBP21.14■□□□□ 0.97
RAB11FIP3-208ENST00000464263 WDR17Q8IZU2 1322 aa21.13■□□□□ 0.97
RAB11FIP3-208ENST00000464263 FAM98CQ17RN3 349 aaKnown RBP21.13■□□□□ 0.97
RAB11FIP3-208ENST00000464263 AMER1Q5JTC6 1135 aaPredicted RBP21.13■□□□□ 0.97
RAB11FIP3-208ENST00000464263 CRB1P82279 1406 aa21.12■□□□□ 0.97
RAB11FIP3-208ENST00000464263 NSD2O96028 1365 aa21.12■□□□□ 0.97
RAB11FIP3-208ENST00000464263 HOXC9P31274 260 aa21.12■□□□□ 0.97
RAB11FIP3-208ENST00000464263 AMPHP49418 695 aa21.12■□□□□ 0.97
RAB11FIP3-208ENST00000464263 SEPT12Q8IYM1 358 aa21.12■□□□□ 0.97
RAB11FIP3-208ENST00000464263 USP35Q9P2H5 1018 aa21.11■□□□□ 0.97
RAB11FIP3-208ENST00000464263 BLMP54132 1417 aaPredicted RBP21.11■□□□□ 0.97
RAB11FIP3-208ENST00000464263 ERBB3P21860 1342 aa21.1■□□□□ 0.97
RAB11FIP3-208ENST00000464263 BARGINQ6ZT62 677 aa21.1■□□□□ 0.97
RAB11FIP3-208ENST00000464263 TOM1L2Q6ZVM7 507 aa21.1■□□□□ 0.97
RAB11FIP3-208ENST00000464263 TCP11L2Q8N4U5 519 aa21.1■□□□□ 0.97
RAB11FIP3-208ENST00000464263 THRAP3Q9Y2W1 955 aaKnown RBP21.1■□□□□ 0.97
RAB11FIP3-208ENST00000464263 PEAK1Q9H792 1746 aa21.09■□□□□ 0.97
RAB11FIP3-208ENST00000464263 THSD7AQ9UPZ6 1657 aa21.09■□□□□ 0.97
RAB11FIP3-208ENST00000464263 ANKRD24Q8TF21 1146 aa21.09■□□□□ 0.97
RAB11FIP3-208ENST00000464263 CSB-PGBD3P0DP91 1061 aa21.08■□□□□ 0.97
RAB11FIP3-208ENST00000464263 CARD10Q9BWT7 1032 aa21.08■□□□□ 0.97
RAB11FIP3-208ENST00000464263 RTL1A6NKG5 1358 aa21.08■□□□□ 0.96
RAB11FIP3-208ENST00000464263 KIF24Q5T7B8 1368 aa21.08■□□□□ 0.96
RAB11FIP3-208ENST00000464263 MORC1Q86VD1 984 aa21.07■□□□□ 0.96
RAB11FIP3-208ENST00000464263 POLKQ9UBT6 870 aa21.07■□□□□ 0.96
RAB11FIP3-208ENST00000464263 EMILIN1Q9Y6C2 1016 aa21.07■□□□□ 0.96
RAB11FIP3-208ENST00000464263 TNNT2P45379 298 aaPredicted RBP21.06■□□□□ 0.96
RAB11FIP3-208ENST00000464263 RGPD2P0DJD1 1756 aa21.05■□□□□ 0.96
RAB11FIP3-208ENST00000464263 HSP90AB2PQ58FF8 381 aa21.05■□□□□ 0.96
RAB11FIP3-208ENST00000464263 NPC1L1Q9UHC9 1359 aa21.05■□□□□ 0.96
RAB11FIP3-208ENST00000464263 A0A0G2JS52 829 aa21.04■□□□□ 0.96
RAB11FIP3-208ENST00000464263 MYT1Q01538 1121 aa21.04■□□□□ 0.96
RAB11FIP3-208ENST00000464263 LTV1Q96GA3 475 aaPredicted RBP21.04■□□□□ 0.96
RAB11FIP3-208ENST00000464263 INSRP06213 1382 aa21.04■□□□□ 0.96
RAB11FIP3-208ENST00000464263 FLT4P35916 1363 aa21.04■□□□□ 0.96
RAB11FIP3-208ENST00000464263 WNK3Q9BYP7 1800 aa21.04■□□□□ 0.96
RAB11FIP3-208ENST00000464263 FAM208AQ9UK61 1670 aaKnown RBP21.03■□□□□ 0.96
RAB11FIP3-208ENST00000464263 NLRP2Q9NX02 1062 aa21.03■□□□□ 0.96
RAB11FIP3-208ENST00000464263 PARP4Q9UKK3 1724 aaKnown RBP21.02■□□□□ 0.96
RAB11FIP3-208ENST00000464263 PPM1GO15355 546 aaPredicted RBP21.02■□□□□ 0.96
RAB11FIP3-208ENST00000464263 CC2D1BQ5T0F9 858 aaKnown RBP21.02■□□□□ 0.96
RAB11FIP3-208ENST00000464263 KRT27Q7Z3Y8 459 aa21.02■□□□□ 0.96
RAB11FIP3-208ENST00000464263 DISP2A7MBM2 1401 aa20.99■□□□□ 0.95
RAB11FIP3-208ENST00000464263 UPF1Q92900 1129 aaKnown RBP eCLIP20.99■□□□□ 0.95
RAB11FIP3-208ENST00000464263 SMG6Q86US8 1419 aaKnown RBP20.98■□□□□ 0.95
RAB11FIP3-208ENST00000464263 NBPF6Q5VWK0 638 aa20.98■□□□□ 0.95
RAB11FIP3-208ENST00000464263 NBPF4Q96M43 638 aa20.98■□□□□ 0.95
RAB11FIP3-208ENST00000464263 CDCA7Q9BWT1 371 aaPredicted RBP20.98■□□□□ 0.95
RAB11FIP3-208ENST00000464263 EP400Q96L91 3159 aa20.96■□□□□ 0.95
RAB11FIP3-208ENST00000464263 DDX10Q13206 875 aaKnown RBP20.95■□□□□ 0.94
RAB11FIP3-208ENST00000464263 PDE3BQ13370 1112 aa20.95■□□□□ 0.94
RAB11FIP3-208ENST00000464263 CNGB1Q14028 1251 aaPredicted RBP20.95■□□□□ 0.94
RAB11FIP3-208ENST00000464263 LRRC37A3O60309 1634 aa20.95■□□□□ 0.94
RAB11FIP3-208ENST00000464263 IL2RBP14784 551 aa20.94■□□□□ 0.94
RAB11FIP3-208ENST00000464263 DDB1Q16531 1140 aa20.94■□□□□ 0.94
RAB11FIP3-208ENST00000464263 FAM182BQ5T319 152 aa20.94■□□□□ 0.94
RAB11FIP3-208ENST00000464263 EXOC5O00471 708 aa20.92■□□□□ 0.94
RAB11FIP3-208ENST00000464263 MTHFSP49914 203 aa20.92■□□□□ 0.94
RAB11FIP3-208ENST00000464263 EIF4A2Q14240 407 aaKnown RBP20.92■□□□□ 0.94
RAB11FIP3-208ENST00000464263 USHBP1Q8N6Y0 703 aa20.91■□□□□ 0.94
RAB11FIP3-208ENST00000464263 EYA1Q99502 592 aa20.9■□□□□ 0.94
RAB11FIP3-208ENST00000464263 NCAPD2Q15021 1401 aa20.89■□□□□ 0.94
RAB11FIP3-208ENST00000464263 FAM196AQ6ZSG2 479 aa20.89■□□□□ 0.93
RAB11FIP3-208ENST00000464263 MARCH10Q8NA82 808 aaPredicted RBP20.89■□□□□ 0.93
RAB11FIP3-208ENST00000464263 ZNF316A6NFI3 1004 aaPredicted RBP20.88■□□□□ 0.93
RAB11FIP3-208ENST00000464263 CCDC125Q86Z20 511 aa20.88■□□□□ 0.93
RAB11FIP3-208ENST00000464263 TNS2Q63HR2 1409 aa20.87■□□□□ 0.93
RAB11FIP3-208ENST00000464263 MEGF6O75095 1541 aa20.86■□□□□ 0.93
RAB11FIP3-208ENST00000464263 SBF2Q86WG5 1849 aa20.85■□□□□ 0.93
RAB11FIP3-208ENST00000464263 IL13P35225 146 aa20.85■□□□□ 0.93
RAB11FIP3-208ENST00000464263 IGSF1Q8N6C5 1336 aa20.84■□□□□ 0.93
RAB11FIP3-208ENST00000464263 PPP2R1AP30153 589 aa20.84■□□□□ 0.93
RAB11FIP3-208ENST00000464263 RAPGEF4Q8WZA2 1011 aa20.84■□□□□ 0.93
RAB11FIP3-208ENST00000464263 OVOS2A0A0G2JMS6 1433 aa20.84■□□□□ 0.93
RAB11FIP3-208ENST00000464263 SHANK3Q9BYB0 1731 aa20.84■□□□□ 0.93
RAB11FIP3-208ENST00000464263 TATP17735 454 aaPredicted RBP20.83■□□□□ 0.93
RAB11FIP3-208ENST00000464263 ZCRB1Q8TBF4 217 aaKnown RBP20.83■□□□□ 0.93
RAB11FIP3-208ENST00000464263 RGPD1P0DJD0 1748 aa20.83■□□□□ 0.92
RAB11FIP3-208ENST00000464263 PARD3Q8TEW0 1356 aa20.83■□□□□ 0.92
RAB11FIP3-208ENST00000464263 BCL9O00512 1426 aa20.82■□□□□ 0.92
RAB11FIP3-208ENST00000464263 TRIM37O94972 964 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms