RNA–Protein interactions for RNA: ENST00000463579.1

SBDS-203, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-203ENST00000463579 SKIP12755 728 aa8.73□□□□□ -1.01
SBDS-203ENST00000463579 CCDC125Q86Z20 511 aa8.73□□□□□ -1.01
SBDS-203ENST00000463579 PALM3A6NDB9 673 aaPredicted RBP8.72□□□□□ -1.01
SBDS-203ENST00000463579 SIAH2O43255 324 aa8.72□□□□□ -1.01
SBDS-203ENST00000463579 RAB15P59190 212 aa8.72□□□□□ -1.01
SBDS-203ENST00000463579 MPNDQ8N594 471 aa8.72□□□□□ -1.01
SBDS-203ENST00000463579 CDK15Q96Q40 435 aa8.72□□□□□ -1.01
SBDS-203ENST00000463579 UCN2Q96RP3 112 aa8.72□□□□□ -1.01
SBDS-203ENST00000463579 TTC24A2A3L6 582 aaPredicted RBP8.71□□□□□ -1.02
SBDS-203ENST00000463579 ATP9BO43861 1147 aa8.71□□□□□ -1.02
SBDS-203ENST00000463579 ALDH1A1P00352 501 aa8.71□□□□□ -1.02
SBDS-203ENST00000463579 TBC1D9Q6ZT07 1266 aa8.71□□□□□ -1.02
SBDS-203ENST00000463579 SEPT12Q8IYM1 358 aa8.71□□□□□ -1.02
SBDS-203ENST00000463579 CYP4X1Q8N118 509 aa8.71□□□□□ -1.02
SBDS-203ENST00000463579 SNIP1Q8TAD8 396 aaKnown RBP8.71□□□□□ -1.02
SBDS-203ENST00000463579 TRIM52Q96A61 297 aa8.71□□□□□ -1.02
SBDS-203ENST00000463579 PKD2L1Q9P0L9 805 aa8.71□□□□□ -1.02
SBDS-203ENST00000463579 ESPNB1AK53 854 aa8.7□□□□□ -1.02
SBDS-203ENST00000463579 PIK3CDO00329 1044 aa8.7□□□□□ -1.02
SBDS-203ENST00000463579 RFX1P22670 979 aa8.7□□□□□ -1.02
SBDS-203ENST00000463579 LMOD1P29536 600 aaPredicted RBP8.7□□□□□ -1.02
SBDS-203ENST00000463579 MAP7D1Q3KQU3 841 aa8.7□□□□□ -1.02
SBDS-203ENST00000463579 PHTF2Q8N3S3 785 aa8.7□□□□□ -1.02
SBDS-203ENST00000463579 ESF1Q9H501 851 aaKnown RBP8.7□□□□□ -1.02
SBDS-203ENST00000463579 TLL2Q9Y6L7 1015 aa8.7□□□□□ -1.02
SBDS-203ENST00000463579 WASF2Q9Y6W5 498 aa8.7□□□□□ -1.02
SBDS-203ENST00000463579 TNFRSF10AO00220 468 aa8.69□□□□□ -1.02
SBDS-203ENST00000463579 ADH1CP00326 375 aa8.69□□□□□ -1.02
SBDS-203ENST00000463579 FSHRP23945 695 aa8.69□□□□□ -1.02
SBDS-203ENST00000463579 DHX9Q08211 1270 aaKnown RBP8.69□□□□□ -1.02
SBDS-203ENST00000463579 PLPP7Q8NBV4 271 aa8.69□□□□□ -1.02
SBDS-203ENST00000463579 DOLKQ9UPQ8 538 aa8.69□□□□□ -1.02
SBDS-203ENST00000463579 USP17L5A8MUK1 530 aa8.68□□□□□ -1.02
SBDS-203ENST00000463579 LZTS3O60299 673 aaPredicted RBP8.68□□□□□ -1.02
SBDS-203ENST00000463579 NR5A1Q13285 461 aa8.68□□□□□ -1.02
SBDS-203ENST00000463579 PCDHB11Q9Y5F2 797 aa8.68□□□□□ -1.02
SBDS-203ENST00000463579 MAFBQ9Y5Q3 323 aaPredicted RBP8.68□□□□□ -1.02
SBDS-203ENST00000463579 GDF9O60383 454 aa8.67□□□□□ -1.02
SBDS-203ENST00000463579 GRM5P41594 1212 aa8.67□□□□□ -1.02
SBDS-203ENST00000463579 INTS6LQ5JSJ4 861 aaKnown RBP8.67□□□□□ -1.02
SBDS-203ENST00000463579 CCDC85AQ96PX6 553 aaPredicted RBP8.67□□□□□ -1.02
SBDS-203ENST00000463579 ACIN1Q9UKV3 1341 aaKnown RBP8.67□□□□□ -1.02
SBDS-203ENST00000463579 USP17L3A6NCW0 530 aa8.66□□□□□ -1.02
SBDS-203ENST00000463579 USP17L4A6NCW7 530 aa8.66□□□□□ -1.02
SBDS-203ENST00000463579 EML3Q32P44 896 aa8.66□□□□□ -1.02
SBDS-203ENST00000463579 OXLD1Q5BKU9 147 aa8.66□□□□□ -1.02
SBDS-203ENST00000463579 CFAP70Q5T0N1 1121 aa8.66□□□□□ -1.02
SBDS-203ENST00000463579 USP17L2Q6R6M4 530 aa8.66□□□□□ -1.02
SBDS-203ENST00000463579 USP17L1Q7RTZ2 530 aa8.66□□□□□ -1.02
SBDS-203ENST00000463579 DEPDC4Q8N2C3 294 aa8.66□□□□□ -1.02
SBDS-203ENST00000463579 SIRT1Q96EB6 747 aa8.66□□□□□ -1.02
SBDS-203ENST00000463579 PPP1R15AO75807 674 aaPredicted RBP8.65□□□□□ -1.02
SBDS-203ENST00000463579 PRR20EP86478 221 aa8.65□□□□□ -1.02
SBDS-203ENST00000463579 PRR20CP86479 221 aa8.65□□□□□ -1.02
SBDS-203ENST00000463579 PRR20DP86480 221 aa8.65□□□□□ -1.02
SBDS-203ENST00000463579 PRR20BP86481 221 aa8.65□□□□□ -1.02
SBDS-203ENST00000463579 PRR20AP86496 221 aa8.65□□□□□ -1.02
SBDS-203ENST00000463579 PLEKHM2Q8IWE5 1019 aa8.65□□□□□ -1.02
SBDS-203ENST00000463579 CCDC116Q8IYX3 515 aa8.65□□□□□ -1.02
SBDS-203ENST00000463579 VRTNQ9H8Y1 702 aa8.65□□□□□ -1.02
SBDS-203ENST00000463579 CHIC2Q9UKJ5 165 aa8.65□□□□□ -1.02
SBDS-203ENST00000463579 ERVH48-1M5A8F1 160 aa8.64□□□□□ -1.03
SBDS-203ENST00000463579 MYCP01106 439 aaPredicted RBP8.64□□□□□ -1.03
SBDS-203ENST00000463579 USP4Q13107 963 aa8.64□□□□□ -1.03
SBDS-203ENST00000463579 NCOA4Q13772 614 aa8.64□□□□□ -1.03
SBDS-203ENST00000463579 TSGA10IPQ3SY00 556 aa8.64□□□□□ -1.03
SBDS-203ENST00000463579 PBXIP1Q96AQ6 731 aa8.64□□□□□ -1.03
SBDS-203ENST00000463579 PGPEP1Q9NXJ5 209 aa8.64□□□□□ -1.03
SBDS-203ENST00000463579 PDZRN3Q9UPQ7 1066 aa8.64□□□□□ -1.03
SBDS-203ENST00000463579 NOD1Q9Y239 953 aa8.64□□□□□ -1.03
SBDS-203ENST00000463579 NNTQ13423 1086 aa8.63□□□□□ -1.03
SBDS-203ENST00000463579 PPP1R26Q5T8A7 1209 aaPredicted RBP8.63□□□□□ -1.03
SBDS-203ENST00000463579 TRIM50Q86XT4 487 aa8.63□□□□□ -1.03
SBDS-203ENST00000463579 ARXQ96QS3 562 aa8.63□□□□□ -1.03
SBDS-203ENST00000463579 EMILIN1Q9Y6C2 1016 aa8.63□□□□□ -1.03
SBDS-203ENST00000463579 J3QL48 77 aa8.62□□□□□ -1.03
SBDS-203ENST00000463579 CDCA8Q53HL2 280 aa8.62□□□□□ -1.03
SBDS-203ENST00000463579 TRAF7Q6Q0C0 670 aa8.62□□□□□ -1.03
SBDS-203ENST00000463579 CDCA7Q9BWT1 371 aaPredicted RBP8.62□□□□□ -1.03
SBDS-203ENST00000463579 TOR4AQ9NXH8 423 aa8.62□□□□□ -1.03
SBDS-203ENST00000463579 MKRN1Q9UHC7 482 aaKnown RBP8.62□□□□□ -1.03
SBDS-203ENST00000463579 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.61□□□□□ -1.03
SBDS-203ENST00000463579 ATP5J2-PTCD1G3V325 749 aa8.61□□□□□ -1.03
SBDS-203ENST00000463579 NR3C2P08235 984 aa8.61□□□□□ -1.03
SBDS-203ENST00000463579 MYT1Q01538 1121 aa8.61□□□□□ -1.03
SBDS-203ENST00000463579 TRIM67Q6ZTA4 783 aa8.61□□□□□ -1.03
SBDS-203ENST00000463579 TMPRSS4Q9NRS4 437 aa8.61□□□□□ -1.03
SBDS-203ENST00000463579 SMPD1P17405 629 aa8.6□□□□□ -1.03
SBDS-203ENST00000463579 ATP1A2P50993 1020 aa8.6□□□□□ -1.03
SBDS-203ENST00000463579 LARP1Q6PKG0 1096 aaKnown RBP8.6□□□□□ -1.03
SBDS-203ENST00000463579 CYLDQ9NQC7 956 aa8.6□□□□□ -1.03
SBDS-203ENST00000463579 RASA1P20936 1047 aa8.59□□□□□ -1.03
SBDS-203ENST00000463579 KANK4Q5T7N3 995 aaPredicted RBP8.59□□□□□ -1.03
SBDS-203ENST00000463579 CC2D2BQ6DHV5 1058 aa8.59□□□□□ -1.03
SBDS-203ENST00000463579 PSME1Q06323 249 aa8.58□□□□□ -1.04
SBDS-203ENST00000463579 HOMEZQ8IX15 550 aa8.58□□□□□ -1.04
SBDS-203ENST00000463579 ZNF784Q8NCA9 323 aaPredicted RBP8.58□□□□□ -1.04
SBDS-203ENST00000463579 RBM19Q9Y4C8 960 aaKnown RBP8.58□□□□□ -1.04
SBDS-203ENST00000463579 WDR4P57081 412 aaKnown RBP8.57□□□□□ -1.04
SBDS-203ENST00000463579 ERVK-9P63128 1117 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms