RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 NSD3Q9BZ95 1437 aa18.07■□□□□ 0.48
R3HDM1-213ENST00000463230 SEPT12Q8IYM1 358 aa18.07■□□□□ 0.48
R3HDM1-213ENST00000463230 BRWD3Q6RI45 1802 aa18.06■□□□□ 0.48
R3HDM1-213ENST00000463230 FYB1O15117 783 aa18.06■□□□□ 0.48
R3HDM1-213ENST00000463230 BLMP54132 1417 aaPredicted RBP18.05■□□□□ 0.48
R3HDM1-213ENST00000463230 CARD14Q9BXL6 1004 aa18.05■□□□□ 0.48
R3HDM1-213ENST00000463230 WDR17Q8IZU2 1322 aa18.05■□□□□ 0.48
R3HDM1-213ENST00000463230 RGPD5Q99666 1765 aa18.05■□□□□ 0.48
R3HDM1-213ENST00000463230 ZBTB7CA1YPR0 619 aa18.04■□□□□ 0.48
R3HDM1-213ENST00000463230 LARP1Q6PKG0 1096 aaKnown RBP18.04■□□□□ 0.48
R3HDM1-213ENST00000463230 CGNL1Q0VF96 1302 aa18.04■□□□□ 0.48
R3HDM1-213ENST00000463230 TCP11L2Q8N4U5 519 aa18.04■□□□□ 0.48
R3HDM1-213ENST00000463230 RTL1A6NKG5 1358 aa18.03■□□□□ 0.48
R3HDM1-213ENST00000463230 SOX12O15370 315 aa18.03■□□□□ 0.48
R3HDM1-213ENST00000463230 FAM98CQ17RN3 349 aaKnown RBP18.03■□□□□ 0.48
R3HDM1-213ENST00000463230 UPF1Q92900 1129 aaKnown RBP eCLIP18.03■□□□□ 0.48
R3HDM1-213ENST00000463230 ANKRD26Q9UPS8 1709 aa18.03■□□□□ 0.48
R3HDM1-213ENST00000463230 FAM208AQ9UK61 1670 aaKnown RBP18.03■□□□□ 0.48
R3HDM1-213ENST00000463230 KIF24Q5T7B8 1368 aa18.02■□□□□ 0.48
R3HDM1-213ENST00000463230 POLR3GLQ9BT43 218 aa18.02■□□□□ 0.48
R3HDM1-213ENST00000463230 AXIN2Q9Y2T1 843 aa18.02■□□□□ 0.48
R3HDM1-213ENST00000463230 PARP4Q9UKK3 1724 aaKnown RBP18.02■□□□□ 0.47
R3HDM1-213ENST00000463230 WNK3Q9BYP7 1800 aa18.02■□□□□ 0.47
R3HDM1-213ENST00000463230 NSD2O96028 1365 aa18.01■□□□□ 0.47
R3HDM1-213ENST00000463230 C11orf95C9JLR9 678 aaPredicted RBP18.01■□□□□ 0.47
R3HDM1-213ENST00000463230 KRT27Q7Z3Y8 459 aa18.01■□□□□ 0.47
R3HDM1-213ENST00000463230 CCDC125Q86Z20 511 aa18.01■□□□□ 0.47
R3HDM1-213ENST00000463230 KIF7Q2M1P5 1343 aa18.01■□□□□ 0.47
R3HDM1-213ENST00000463230 CCDC7Q96M83 1385 aa18.01■□□□□ 0.47
R3HDM1-213ENST00000463230 PPP4R3CPQ6ZMV5 832 aa18■□□□□ 0.47
R3HDM1-213ENST00000463230 IP6K1Q92551 441 aa18■□□□□ 0.47
R3HDM1-213ENST00000463230 CDCA7Q9BWT1 371 aaPredicted RBP18■□□□□ 0.47
R3HDM1-213ENST00000463230 GGNBP2Q9H3C7 697 aa18■□□□□ 0.47
R3HDM1-213ENST00000463230 CARD10Q9BWT7 1032 aa18■□□□□ 0.47
R3HDM1-213ENST00000463230 TOM1L2Q6ZVM7 507 aa17.99■□□□□ 0.47
R3HDM1-213ENST00000463230 A0A0G2JS52 829 aa17.99■□□□□ 0.47
R3HDM1-213ENST00000463230 MYT1Q01538 1121 aa17.99■□□□□ 0.47
R3HDM1-213ENST00000463230 PANK3Q9H999 370 aa17.99■□□□□ 0.47
R3HDM1-213ENST00000463230 ERBB3P21860 1342 aa17.99■□□□□ 0.47
R3HDM1-213ENST00000463230 MAP3K19Q56UN5 1328 aa17.98■□□□□ 0.47
R3HDM1-213ENST00000463230 CSB-PGBD3P0DP91 1061 aa17.98■□□□□ 0.47
R3HDM1-213ENST00000463230 USP35Q9P2H5 1018 aa17.96■□□□□ 0.47
R3HDM1-213ENST00000463230 AMPHP49418 695 aa17.95■□□□□ 0.46
R3HDM1-213ENST00000463230 ANKRD24Q8TF21 1146 aa17.95■□□□□ 0.46
R3HDM1-213ENST00000463230 DISP2A7MBM2 1401 aa17.95■□□□□ 0.46
R3HDM1-213ENST00000463230 HOXC9P31274 260 aa17.95■□□□□ 0.46
R3HDM1-213ENST00000463230 LRRC37A3O60309 1634 aa17.94■□□□□ 0.46
R3HDM1-213ENST00000463230 FLT4P35916 1363 aa17.93■□□□□ 0.46
R3HDM1-213ENST00000463230 KNSTRNQ9Y448 316 aa17.93■□□□□ 0.46
R3HDM1-213ENST00000463230 INSRP06213 1382 aa17.92■□□□□ 0.46
R3HDM1-213ENST00000463230 RGPD1P0DJD0 1748 aa17.92■□□□□ 0.46
R3HDM1-213ENST00000463230 SMG6Q86US8 1419 aaKnown RBP17.92■□□□□ 0.46
R3HDM1-213ENST00000463230 PDE3BQ13370 1112 aa17.92■□□□□ 0.46
R3HDM1-213ENST00000463230 PEAK1Q9H792 1746 aa17.91■□□□□ 0.46
R3HDM1-213ENST00000463230 FAM196AQ6ZSG2 479 aa17.91■□□□□ 0.46
R3HDM1-213ENST00000463230 NLRP2Q9NX02 1062 aa17.91■□□□□ 0.46
R3HDM1-213ENST00000463230 WASHC2AQ641Q2 1341 aa17.9■□□□□ 0.46
R3HDM1-213ENST00000463230 RRS1Q15050 365 aaKnown RBP17.9■□□□□ 0.46
R3HDM1-213ENST00000463230 MAP2P11137 1827 aaKnown RBP17.9■□□□□ 0.46
R3HDM1-213ENST00000463230 NPC1L1Q9UHC9 1359 aa17.89■□□□□ 0.45
R3HDM1-213ENST00000463230 DDB1Q16531 1140 aa17.88■□□□□ 0.45
R3HDM1-213ENST00000463230 BCL9O00512 1426 aa17.88■□□□□ 0.45
R3HDM1-213ENST00000463230 TNS2Q63HR2 1409 aa17.88■□□□□ 0.45
R3HDM1-213ENST00000463230 OVOS2A0A0G2JMS6 1433 aa17.87■□□□□ 0.45
R3HDM1-213ENST00000463230 ZEB1P37275 1124 aaPredicted RBP17.87■□□□□ 0.45
R3HDM1-213ENST00000463230 SF3B2Q13435 895 aaKnown RBP17.87■□□□□ 0.45
R3HDM1-213ENST00000463230 IL2RBP14784 551 aa17.87■□□□□ 0.45
R3HDM1-213ENST00000463230 FBLN1P23142 703 aa17.87■□□□□ 0.45
R3HDM1-213ENST00000463230 AMER1Q5JTC6 1135 aaPredicted RBP17.87■□□□□ 0.45
R3HDM1-213ENST00000463230 PER1O15534 1290 aaPredicted RBP17.86■□□□□ 0.45
R3HDM1-213ENST00000463230 MORC1Q86VD1 984 aa17.85■□□□□ 0.45
R3HDM1-213ENST00000463230 TNS1Q9HBL0 1735 aaKnown RBP17.85■□□□□ 0.45
R3HDM1-213ENST00000463230 EXOC5O00471 708 aa17.84■□□□□ 0.45
R3HDM1-213ENST00000463230 LTV1Q96GA3 475 aaPredicted RBP17.84■□□□□ 0.45
R3HDM1-213ENST00000463230 POLKQ9UBT6 870 aa17.84■□□□□ 0.45
R3HDM1-213ENST00000463230 EMILIN1Q9Y6C2 1016 aa17.84■□□□□ 0.45
R3HDM1-213ENST00000463230 RGPD2P0DJD1 1756 aa17.84■□□□□ 0.45
R3HDM1-213ENST00000463230 HSP90AB2PQ58FF8 381 aa17.83■□□□□ 0.45
R3HDM1-213ENST00000463230 NCAPD2Q15021 1401 aa17.83■□□□□ 0.45
R3HDM1-213ENST00000463230 PLEKHG2Q9H7P9 1386 aa17.82■□□□□ 0.44
R3HDM1-213ENST00000463230 BAG6P46379 1132 aa17.82■□□□□ 0.44
R3HDM1-213ENST00000463230 SBF2Q86WG5 1849 aa17.81■□□□□ 0.44
R3HDM1-213ENST00000463230 NBPF6Q5VWK0 638 aa17.8■□□□□ 0.44
R3HDM1-213ENST00000463230 NBPF4Q96M43 638 aa17.8■□□□□ 0.44
R3HDM1-213ENST00000463230 PARD3Q8TEW0 1356 aa17.8■□□□□ 0.44
R3HDM1-213ENST00000463230 FAM182BQ5T319 152 aa17.79■□□□□ 0.44
R3HDM1-213ENST00000463230 MARCH10Q8NA82 808 aaPredicted RBP17.79■□□□□ 0.44
R3HDM1-213ENST00000463230 ZBTB22O15209 634 aa17.79■□□□□ 0.44
R3HDM1-213ENST00000463230 PPM1GO15355 546 aaPredicted RBP17.79■□□□□ 0.44
R3HDM1-213ENST00000463230 RGPD3A6NKT7 1758 aaPredicted RBP17.79■□□□□ 0.44
R3HDM1-213ENST00000463230 RGPD4Q7Z3J3 1758 aa17.79■□□□□ 0.44
R3HDM1-213ENST00000463230 TNNT2P45379 298 aaPredicted RBP17.78■□□□□ 0.44
R3HDM1-213ENST00000463230 RAPGEF4Q8WZA2 1011 aa17.77■□□□□ 0.44
R3HDM1-213ENST00000463230 MEGF6O75095 1541 aa17.77■□□□□ 0.44
R3HDM1-213ENST00000463230 TRIM37O94972 964 aa17.76■□□□□ 0.43
R3HDM1-213ENST00000463230 SHANK3Q9BYB0 1731 aa17.76■□□□□ 0.43
R3HDM1-213ENST00000463230 NHSQ6T4R5 1651 aa17.75■□□□□ 0.43
R3HDM1-213ENST00000463230 TATP17735 454 aaPredicted RBP17.75■□□□□ 0.43
R3HDM1-213ENST00000463230 EP400Q96L91 3159 aa17.75■□□□□ 0.43
R3HDM1-213ENST00000463230 BCL11BQ9C0K0 894 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 257.2 ms