RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 ABCC6O95255 1503 aa18.27■□□□□ 0.51
HDAC1-203ENST00000463172 PDE3BQ13370 1112 aa18.26■□□□□ 0.51
HDAC1-203ENST00000463172 TOM1L2Q6ZVM7 507 aa18.26■□□□□ 0.51
HDAC1-203ENST00000463172 NME9Q86XW9 330 aa18.26■□□□□ 0.51
HDAC1-203ENST00000463172 ANKRD36BQ8N2N9 1353 aa18.26■□□□□ 0.51
HDAC1-203ENST00000463172 CSB-PGBD3P0DP91 1061 aa18.25■□□□□ 0.51
HDAC1-203ENST00000463172 COL18A1P39060 1754 aa18.25■□□□□ 0.51
HDAC1-203ENST00000463172 WDR17Q8IZU2 1322 aa18.24■□□□□ 0.51
HDAC1-203ENST00000463172 NFAT5O94916 1531 aa18.24■□□□□ 0.51
HDAC1-203ENST00000463172 C11orf95C9JLR9 678 aaPredicted RBP18.24■□□□□ 0.51
HDAC1-203ENST00000463172 RGPD1P0DJD0 1748 aa18.23■□□□□ 0.51
HDAC1-203ENST00000463172 FAM196AQ6ZSG2 479 aa18.23■□□□□ 0.51
HDAC1-203ENST00000463172 COG3Q96JB2 828 aa18.23■□□□□ 0.51
HDAC1-203ENST00000463172 CDCA7Q9BWT1 371 aaPredicted RBP18.23■□□□□ 0.51
HDAC1-203ENST00000463172 LTN1O94822 1766 aa18.22■□□□□ 0.51
HDAC1-203ENST00000463172 RGPD5Q99666 1765 aa18.22■□□□□ 0.51
HDAC1-203ENST00000463172 BAG6P46379 1132 aa18.22■□□□□ 0.51
HDAC1-203ENST00000463172 ZRANB1Q9UGI0 708 aa18.22■□□□□ 0.51
HDAC1-203ENST00000463172 PARP4Q9UKK3 1724 aaKnown RBP18.21■□□□□ 0.51
HDAC1-203ENST00000463172 EIF4G2P78344 907 aaKnown RBP eCLIP18.21■□□□□ 0.512e-8■■■■■ 38.7
HDAC1-203ENST00000463172 AXIN2Q9Y2T1 843 aa18.2■□□□□ 0.5
HDAC1-203ENST00000463172 OVOS2A0A0J9YW53 1432 aa18.19■□□□□ 0.5
HDAC1-203ENST00000463172 OVOS2Q6IE36 1432 aa18.19■□□□□ 0.5
HDAC1-203ENST00000463172 CARD10Q9BWT7 1032 aa18.19■□□□□ 0.5
HDAC1-203ENST00000463172 CCDC7Q96M83 1385 aa18.18■□□□□ 0.5
HDAC1-203ENST00000463172 WNK3Q9BYP7 1800 aa18.17■□□□□ 0.5
HDAC1-203ENST00000463172 DDB1Q16531 1140 aa18.17■□□□□ 0.5
HDAC1-203ENST00000463172 FAM182BQ5T319 152 aa18.16■□□□□ 0.5
HDAC1-203ENST00000463172 KIF20BQ96Q89 1820 aa18.15■□□□□ 0.5
HDAC1-203ENST00000463172 DEFB132Q7Z7B7 95 aa18.15■□□□□ 0.5
HDAC1-203ENST00000463172 NLRP2Q9NX02 1062 aa18.14■□□□□ 0.49
HDAC1-203ENST00000463172 ERBB3P21860 1342 aa18.14■□□□□ 0.49
HDAC1-203ENST00000463172 FAM208AQ9UK61 1670 aaKnown RBP18.13■□□□□ 0.49
HDAC1-203ENST00000463172 TRIM37O94972 964 aa18.13■□□□□ 0.49
HDAC1-203ENST00000463172 AMPHP49418 695 aa18.13■□□□□ 0.49
HDAC1-203ENST00000463172 POLR3GLQ9BT43 218 aa18.13■□□□□ 0.49
HDAC1-203ENST00000463172 OVOS2A0A0G2JMS6 1433 aa18.13■□□□□ 0.49
HDAC1-203ENST00000463172 LRRC37A3O60309 1634 aa18.12■□□□□ 0.49
HDAC1-203ENST00000463172 MYOM1P52179 1685 aa18.12■□□□□ 0.49
HDAC1-203ENST00000463172 EXOC5O00471 708 aa18.12■□□□□ 0.49
HDAC1-203ENST00000463172 HSPA5P11021 654 aaKnown RBP18.12■□□□□ 0.49
HDAC1-203ENST00000463172 ANKRD24Q8TF21 1146 aa18.12■□□□□ 0.49
HDAC1-203ENST00000463172 IP6K1Q92551 441 aa18.12■□□□□ 0.49
HDAC1-203ENST00000463172 TNS1Q9HBL0 1735 aaKnown RBP18.12■□□□□ 0.49
HDAC1-203ENST00000463172 FYB1O15117 783 aa18.11■□□□□ 0.49
HDAC1-203ENST00000463172 DISP2A7MBM2 1401 aa18.11■□□□□ 0.49
HDAC1-203ENST00000463172 RTL1A6NKG5 1358 aa18.1■□□□□ 0.49
HDAC1-203ENST00000463172 PARD3Q8TEW0 1356 aa18.1■□□□□ 0.49
HDAC1-203ENST00000463172 APBA3O96018 575 aa18.1■□□□□ 0.49
HDAC1-203ENST00000463172 GGNBP2Q9H3C7 697 aa18.1■□□□□ 0.49
HDAC1-203ENST00000463172 NSD3Q9BZ95 1437 aa18.09■□□□□ 0.49
HDAC1-203ENST00000463172 CGNL1Q0VF96 1302 aa18.09■□□□□ 0.49
HDAC1-203ENST00000463172 EN1Q05925 392 aaPredicted RBP18.09■□□□□ 0.49
HDAC1-203ENST00000463172 MAP3K19Q56UN5 1328 aa18.08■□□□□ 0.49
HDAC1-203ENST00000463172 IL2RBP14784 551 aa18.08■□□□□ 0.48
HDAC1-203ENST00000463172 SMG6Q86US8 1419 aaKnown RBP18.07■□□□□ 0.48
HDAC1-203ENST00000463172 HOXC9P31274 260 aa18.07■□□□□ 0.48
HDAC1-203ENST00000463172 LTV1Q96GA3 475 aaPredicted RBP18.06■□□□□ 0.48
HDAC1-203ENST00000463172 TNS2Q63HR2 1409 aa18.06■□□□□ 0.48
HDAC1-203ENST00000463172 KIF24Q5T7B8 1368 aa18.05■□□□□ 0.48
HDAC1-203ENST00000463172 PEAK1Q9H792 1746 aa18.05■□□□□ 0.48
HDAC1-203ENST00000463172 SBF2Q86WG5 1849 aa18.05■□□□□ 0.48
HDAC1-203ENST00000463172 CARD14Q9BXL6 1004 aa18.04■□□□□ 0.48
HDAC1-203ENST00000463172 BCL9O00512 1426 aa18.04■□□□□ 0.48
HDAC1-203ENST00000463172 RRS1Q15050 365 aaKnown RBP18.03■□□□□ 0.48
HDAC1-203ENST00000463172 MARCH10Q8NA82 808 aaPredicted RBP18.03■□□□□ 0.48
HDAC1-203ENST00000463172 KAT6BQ8WYB5 2073 aa18.02■□□□□ 0.48
HDAC1-203ENST00000463172 EZH2Q15910 746 aaKnown RBP18.02■□□□□ 0.48
HDAC1-203ENST00000463172 CAMKK2Q96RR4 588 aa18.02■□□□□ 0.48
HDAC1-203ENST00000463172 BCL11BQ9C0K0 894 aaPredicted RBP18.02■□□□□ 0.48
HDAC1-203ENST00000463172 FLT4P35916 1363 aa18.02■□□□□ 0.47
HDAC1-203ENST00000463172 NBPF14Q5TI25 921 aa18.01■□□□□ 0.47
HDAC1-203ENST00000463172 RGPD3A6NKT7 1758 aaPredicted RBP18■□□□□ 0.47
HDAC1-203ENST00000463172 RGPD4Q7Z3J3 1758 aa18■□□□□ 0.47
HDAC1-203ENST00000463172 ANKRD26Q9UPS8 1709 aa18■□□□□ 0.47
HDAC1-203ENST00000463172 FBLN1P23142 703 aa17.99■□□□□ 0.47
HDAC1-203ENST00000463172 INSRP06213 1382 aa17.99■□□□□ 0.47
HDAC1-203ENST00000463172 MAP2P11137 1827 aaKnown RBP17.98■□□□□ 0.47
HDAC1-203ENST00000463172 PLSCR1O15162 318 aa17.98■□□□□ 0.47
HDAC1-203ENST00000463172 PANK3Q9H999 370 aa17.98■□□□□ 0.47
HDAC1-203ENST00000463172 NSD2O96028 1365 aa17.98■□□□□ 0.47
HDAC1-203ENST00000463172 RREB1Q92766 1687 aa17.98■□□□□ 0.47
HDAC1-203ENST00000463172 RAPGEF4Q8WZA2 1011 aa17.97■□□□□ 0.47
HDAC1-203ENST00000463172 RGPD2P0DJD1 1756 aa17.96■□□□□ 0.47
HDAC1-203ENST00000463172 PPM1GO15355 546 aaPredicted RBP17.96■□□□□ 0.47
HDAC1-203ENST00000463172 KNSTRNQ9Y448 316 aa17.96■□□□□ 0.47
HDAC1-203ENST00000463172 PSDA5PKW4 1024 aaPredicted RBP17.95■□□□□ 0.46
HDAC1-203ENST00000463172 HSP90AB2PQ58FF8 381 aa17.95■□□□□ 0.46
HDAC1-203ENST00000463172 NHSQ6T4R5 1651 aa17.94■□□□□ 0.46
HDAC1-203ENST00000463172 TATP17735 454 aaPredicted RBP17.94■□□□□ 0.46
HDAC1-203ENST00000463172 ZCRB1Q8TBF4 217 aaKnown RBP17.94■□□□□ 0.46
HDAC1-203ENST00000463172 DDX54Q8TDD1 881 aaKnown RBP17.94■□□□□ 0.46
HDAC1-203ENST00000463172 NUP188Q5SRE5 1749 aa17.94■□□□□ 0.46
HDAC1-203ENST00000463172 R3HDM1Q15032 1099 aaKnown RBP17.93■□□□□ 0.46
HDAC1-203ENST00000463172 NBPF6Q5VWK0 638 aa17.93■□□□□ 0.46
HDAC1-203ENST00000463172 NBPF4Q96M43 638 aa17.93■□□□□ 0.46
HDAC1-203ENST00000463172 EMILIN1Q9Y6C2 1016 aa17.93■□□□□ 0.46
HDAC1-203ENST00000463172 WASHC2AQ641Q2 1341 aa17.92■□□□□ 0.46
HDAC1-203ENST00000463172 ACSBG1Q96GR2 724 aa17.91■□□□□ 0.46
HDAC1-203ENST00000463172 TNNT2P45379 298 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms