RNA–Protein interactions for RNA: ENST00000463083.1

SMIM29-204, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 1,487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-204ENST00000463083 CDK12Q9NYV4 1490 aaPredicted RBP24.25■■□□□ 1.47
SMIM29-204ENST00000463083 RTL1A6NKG5 1358 aa24.24■■□□□ 1.47
SMIM29-204ENST00000463083 IP6K1Q92551 441 aa24.24■■□□□ 1.47
SMIM29-204ENST00000463083 KIF24Q5T7B8 1368 aa24.23■■□□□ 1.47
SMIM29-204ENST00000463083 FAM83GA6ND36 823 aa24.22■■□□□ 1.47
SMIM29-204ENST00000463083 LTV1Q96GA3 475 aaPredicted RBP24.2■■□□□ 1.47
SMIM29-204ENST00000463083 AXIN2Q9Y2T1 843 aa24.2■■□□□ 1.47
SMIM29-204ENST00000463083 DIAPH1O60610 1272 aaKnown RBP24.19■■□□□ 1.46
SMIM29-204ENST00000463083 MEX3CQ5U5Q3 659 aaKnown RBP24.19■■□□□ 1.46
SMIM29-204ENST00000463083 INSRP06213 1382 aa24.18■■□□□ 1.46
SMIM29-204ENST00000463083 LRP6O75581 1613 aa24.18■■□□□ 1.46
SMIM29-204ENST00000463083 COL18A1P39060 1754 aa24.17■■□□□ 1.46
SMIM29-204ENST00000463083 RGPD5Q99666 1765 aa24.17■■□□□ 1.46
SMIM29-204ENST00000463083 BLMP54132 1417 aaPredicted RBP24.17■■□□□ 1.46
SMIM29-204ENST00000463083 COL3A1P02461 1466 aaPredicted RBP24.16■■□□□ 1.46
SMIM29-204ENST00000463083 EIF4A2Q14240 407 aaKnown RBP24.16■■□□□ 1.46
SMIM29-204ENST00000463083 C8orf37Q96NL8 207 aa24.16■■□□□ 1.46
SMIM29-204ENST00000463083 COL14A1Q05707 1796 aaKnown RBP24.15■■□□□ 1.46
SMIM29-204ENST00000463083 ABCC6O95255 1503 aa24.15■■□□□ 1.46
SMIM29-204ENST00000463083 BTG4Q9NY30 223 aa24.15■■□□□ 1.46
SMIM29-204ENST00000463083 NUDCQ9Y266 331 aa24.15■■□□□ 1.46
SMIM29-204ENST00000463083 U2SURPO15042 1029 aaKnown RBP24.14■■□□□ 1.46
SMIM29-204ENST00000463083 ANKRD24Q8TF21 1146 aa24.14■■□□□ 1.46
SMIM29-204ENST00000463083 CAMTA1Q9Y6Y1 1673 aa24.13■■□□□ 1.45
SMIM29-204ENST00000463083 CSB-PGBD3P0DP91 1061 aa24.13■■□□□ 1.45
SMIM29-204ENST00000463083 IL13P35225 146 aa24.13■■□□□ 1.45
SMIM29-204ENST00000463083 NGLY1Q96IV0 654 aa24.13■■□□□ 1.45
SMIM29-204ENST00000463083 LMO7Q8WWI1 1683 aa24.13■■□□□ 1.45
SMIM29-204ENST00000463083 EVA1CP58658 441 aa24.13■■□□□ 1.45
SMIM29-204ENST00000463083 WDR43Q15061 677 aaKnown RBP eCLIP24.13■■□□□ 1.45
SMIM29-204ENST00000463083 STRN4Q9NRL3 753 aa24.13■■□□□ 1.45
SMIM29-204ENST00000463083 ERBB3P21860 1342 aa24.11■■□□□ 1.45
SMIM29-204ENST00000463083 FAM9BQ8IZU0 186 aa24.11■■□□□ 1.45
SMIM29-204ENST00000463083 PNISRQ8TF01 805 aaKnown RBP24.11■■□□□ 1.45
SMIM29-204ENST00000463083 PLCH1Q4KWH8 1693 aa24.1■■□□□ 1.45
SMIM29-204ENST00000463083 U2AF1L5P0DN76 240 aaPredicted RBP24.1■■□□□ 1.45
SMIM29-204ENST00000463083 U2AF1Q01081 240 aaKnown RBP eCLIP24.1■■□□□ 1.45
SMIM29-204ENST00000463083 COL5A2P05997 1499 aaPredicted RBP24.09■■□□□ 1.45
SMIM29-204ENST00000463083 EYA1Q99502 592 aa24.07■■□□□ 1.44
SMIM29-204ENST00000463083 NLRP2Q9NX02 1062 aa24.07■■□□□ 1.44
SMIM29-204ENST00000463083 ILDR1Q86SU0 546 aaPredicted RBP24.07■■□□□ 1.44
SMIM29-204ENST00000463083 TOM1L2Q6ZVM7 507 aa24.06■■□□□ 1.44
SMIM29-204ENST00000463083 WDR17Q8IZU2 1322 aa24.06■■□□□ 1.44
SMIM29-204ENST00000463083 SLIT2O94813 1529 aa24.05■■□□□ 1.44
SMIM29-204ENST00000463083 NBPF6Q5VWK0 638 aa24.05■■□□□ 1.44
SMIM29-204ENST00000463083 LARP1Q6PKG0 1096 aaKnown RBP24.05■■□□□ 1.44
SMIM29-204ENST00000463083 NBPF4Q96M43 638 aa24.05■■□□□ 1.44
SMIM29-204ENST00000463083 ADAMTS8Q9UP79 889 aa24.05■■□□□ 1.44
SMIM29-204ENST00000463083 RGPD2P0DJD1 1756 aa24.04■■□□□ 1.44
SMIM29-204ENST00000463083 HMOX1P09601 288 aa24.04■■□□□ 1.44
SMIM29-204ENST00000463083 USHBP1Q8N6Y0 703 aa24.04■■□□□ 1.44
SMIM29-204ENST00000463083 NWD2Q9ULI1 1742 aa24.04■■□□□ 1.44
SMIM29-204ENST00000463083 SULT6B1Q6IMI4 303 aa24.03■■□□□ 1.44
SMIM29-204ENST00000463083 FNBP4Q8N3X1 1017 aaPredicted RBP24.03■■□□□ 1.44
SMIM29-204ENST00000463083 AFF2P51816 1311 aa24.02■■□□□ 1.44
SMIM29-204ENST00000463083 IGSF1Q8N6C5 1336 aa24.02■■□□□ 1.44
SMIM29-204ENST00000463083 UNC5CLQ8IV45 518 aa24.02■■□□□ 1.44
SMIM29-204ENST00000463083 USP21Q9UK80 565 aa24.02■■□□□ 1.44
SMIM29-204ENST00000463083 RGPD1P0DJD0 1748 aa24.01■■□□□ 1.43
SMIM29-204ENST00000463083 FAM208AQ9UK61 1670 aaKnown RBP24.01■■□□□ 1.43
SMIM29-204ENST00000463083 AEBP1Q8IUX7 1158 aa24■■□□□ 1.43
SMIM29-204ENST00000463083 USP35Q9P2H5 1018 aa24■■□□□ 1.43
SMIM29-204ENST00000463083 NRAPQ86VF7 1730 aa24■■□□□ 1.43
SMIM29-204ENST00000463083 CCDC9Q9Y3X0 531 aaKnown RBP24■■□□□ 1.43
SMIM29-204ENST00000463083 BCL9LQ86UU0 1499 aa23.99■■□□□ 1.43
SMIM29-204ENST00000463083 CRB1P82279 1406 aa23.99■■□□□ 1.43
SMIM29-204ENST00000463083 CARD10Q9BWT7 1032 aa23.98■■□□□ 1.43
SMIM29-204ENST00000463083 FCHSD2O94868 740 aa23.97■■□□□ 1.43
SMIM29-204ENST00000463083 CCDC146Q8IYE0 955 aa23.97■■□□□ 1.43
SMIM29-204ENST00000463083 PRKAR2BP31323 418 aa23.96■■□□□ 1.43
SMIM29-204ENST00000463083 RSPH6AQ9H0K4 717 aa23.96■■□□□ 1.43
SMIM29-204ENST00000463083 PNNQ9H307 717 aaKnown RBP23.95■■□□□ 1.42
SMIM29-204ENST00000463083 KDRP35968 1356 aa23.94■■□□□ 1.42
SMIM29-204ENST00000463083 VPS72Q15906 364 aa23.94■■□□□ 1.42
SMIM29-204ENST00000463083 NEFMP07197 916 aa23.93■■□□□ 1.42
SMIM29-204ENST00000463083 SPATA31A1Q5TZJ5 1347 aa23.92■■□□□ 1.42
SMIM29-204ENST00000463083 SPATA31A5Q5VU36 1347 aa23.92■■□□□ 1.42
SMIM29-204ENST00000463083 SPATA31A7Q8IWB4 1347 aa23.92■■□□□ 1.42
SMIM29-204ENST00000463083 NCAPD2Q15021 1401 aa23.92■■□□□ 1.42
SMIM29-204ENST00000463083 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.92■■□□□ 1.42
SMIM29-204ENST00000463083 RAPGEF4Q8WZA2 1011 aa23.92■■□□□ 1.42
SMIM29-204ENST00000463083 MAPK8IP3Q9UPT6 1336 aa23.91■■□□□ 1.42
SMIM29-204ENST00000463083 TCP11L2Q8N4U5 519 aa23.91■■□□□ 1.42
SMIM29-204ENST00000463083 RUNDC1Q96C34 613 aa23.91■■□□□ 1.42
SMIM29-204ENST00000463083 PLEKHF1Q96S99 279 aa23.9■■□□□ 1.42
SMIM29-204ENST00000463083 TRPC5Q9UL62 973 aaPredicted RBP23.9■■□□□ 1.42
SMIM29-204ENST00000463083 SENP3-EIF4A1A0A087X0R7 540 aa23.89■■□□□ 1.42
SMIM29-204ENST00000463083 TATP17735 454 aaPredicted RBP23.88■■□□□ 1.41
SMIM29-204ENST00000463083 ZNF772Q68DY9 489 aaPredicted RBP23.88■■□□□ 1.41
SMIM29-204ENST00000463083 PHACTR3Q96KR7 559 aa23.88■■□□□ 1.41
SMIM29-204ENST00000463083 PHF23Q9BUL5 403 aaPredicted RBP23.88■■□□□ 1.41
SMIM29-204ENST00000463083 QTRT2Q9H974 415 aaKnown RBP23.88■■□□□ 1.41
SMIM29-204ENST00000463083 IL2RBP14784 551 aa23.87■■□□□ 1.41
SMIM29-204ENST00000463083 ATRNO75882 1429 aa23.87■■□□□ 1.41
SMIM29-204ENST00000463083 THRAP3Q9Y2W1 955 aaKnown RBP23.87■■□□□ 1.41
SMIM29-204ENST00000463083 MEGF6O75095 1541 aa23.86■■□□□ 1.41
SMIM29-204ENST00000463083 APAF1O14727 1248 aa23.85■■□□□ 1.41
SMIM29-204ENST00000463083 GJD4Q96KN9 370 aaPredicted RBP23.85■■□□□ 1.41
SMIM29-204ENST00000463083 YTHDC1Q96MU7 727 aaKnown RBP23.85■■□□□ 1.41
SMIM29-204ENST00000463083 NEUROD2Q15784 382 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms